Intermolecular packing and alignment in an ordered beta-hairpin antimicrobial peptide aggregate from 2D solid-state NMR

The aggregation and packing of a membrane-disruptive beta-hairpin antimicrobial peptide, protegrin-1 (PG-1), in the solid state are investigated to understand its oligomerization and hydrogen-bonding propensity. Incubation of PG-1 in phosphate buffer saline produced well-ordered nanometer-scale aggregates, as indicated by 13C and 15N NMR line widths, chemical shifts, and electron microscopy. Two-dimensional 13C and 1H spin diffusion experiments using C-terminus strand and N-terminus strand labeled peptides indicate that the beta-hairpin molecules in these ordered aggregates are oriented parallel to each other with like strands lining the intermolecular interface. In comparison, disordered and lyophilized peptide samples are randomly packed with both parallel and antiparallel alignments. The PG-1 aggregates show significant immobilization of the Phe ring near the beta-turn, further supporting the structural ordering. The intermolecular packing of PG-1 found in the solid state is consistent with its oligomerization in lipid bilayers. This solid-state aggregation approach may be useful for determining the quaternary structure of peptides in general and for gaining insights into the oligomerization of antimicrobial peptides in lipid bilayers in particular.     

Perfectly dissolved boron nitride nanotubes due to polymer wrapping

We report for the first time that boron nitride nanotubes (BNNTs) may be dissolved in organic solvents by wrapping them with a polymer. Transmission electron microscopy and cathodoluminescence studies indicate the strong pi-pi interactions between BNNTs and the polymer. A band gap ranging from 5.2 to 5.5 eV was documented for the BNNTs independent of their geometrical characteristics by using ultraviolet-visible absorption experiments on composite films and thin BNNT films prepared from solutions.     

NO Chemisorption on Pt(111), Rh/Pt(111), and Pd/Pt(111)

The chemisorption of NO on clean Pt(111), Rh/Pt(111) alloy, and Pd/Pt(111) alloy surfaces has been studied by first principles density functional theory (DFT) computations. It was found that the surface compositions of the surface alloys have very different effects on the adsorption of NO on Rh/Pt(111) versus that on Pd/Pt(111). This is due to the different bond strength between the two metals in each alloy system. A complex d-band center weighting model developed by authors in a previous study for SO2 adsorption is demonstrated to be necessary for quantifying NO adsorption on Pd/Pt(111). A strong linear relationship between the weighted positions of the d states of the surfaces and the molecular NO adsorption energies shows the closer the weighted d-band center is shifted to the Fermi energy level, the stronger the adsorption of NO will be. The consequences of this study for the optimized design of three-way automotive catalysts, (TWC) are also discussed.     

Molecular structure of Hf(BH4)4 investigated by quantum mechanical calculations and gas-phase electron diffraction

The structure of the gaseous hafnium tetrakis(tetrahydroborate) molecule, Hf(BH4)4, has been investigated by detailed quantum mechanical calculations and by analysis of its gas electron-diffraction (GED) pattern. The ground-state geometry possesses T symmetry with all of the triply-bridged BH4 groups twisted equally about the Hf...B-H axes. Salient structural parameters (ra distances, r angles) deduced from the GED pattern by the SARACEN method were: r(Hf...B) 231.4(2), r(Hf-Hb) 221.5(7), r(B-Hb) 127.6(5), r(B-Ht) 121(1) pm, Hf...B-Hb 69.4(3), Hb-B-Hb 108.4(4), Hb-B-Ht 110.6(3), B...Hf...B-Hb 166(1) degrees. A notable feature is the large magnitude of the Hf...B and Hf-Hb anharmonicity parameters, attributed to the fluxional hydrogen atom exchange process. The properties are compared with those of related tetrahydroborates..     

Polyoxometalates matrixed into surfactants: synthesis, characterizations, and conformations of surfactants

We synthesized two surfactant-encapsulated polyoxometalate (POM) clusters (SECs), (DODA)(15)[H(3)Mo(57)V(6)(NO)(6)O(189)(H(2)O)(12)(VO)(6)].13H(2)O (SEC-2, DODA: dimethyldioctadecyl ammonium) and (DODA)(12)[Eu(H(2)O)P(5)W(30)O(110)].28H(2)O (SEC-3). SECs were characterized in detail by elemental analysis, UV-Vis absorption spectroscopy, FTIR, 1H NMR, thermogravimetric analysis, Langmuir isotherms, and powdered X-ray diffractions. SEC-2 can form a stable monolayer at the air-water interface. SEC-2 and SEC-3 possess a layered structure with periodicities of 3.8 and 5.05 nm, respectively. Alkyl chains in SEC-2 are disordered, but SEC-3 is indicative of well-ordered alkyl chains. According to the simplified structural analysis for SEC-2 and SEC-3, DODAs occupy areas of 1.12 and 0.589 nm(2) on the surface of the POMs, which are characteristic of the liquid-like and crystalline-like phases for DODA, respectively. The different conformations of DODAs then lead to the different packing structures of SECs. This work is aiming to control the organizational structures of the POM-based materials by selecting the appropriate POMs.     

Investigations of the EPR parameters for Sm3+ ions in KY3F10 and LiYF4 crystals

In this paper, we calculate the EPR parameters (g factors g parallel, g perpendicular and hyperfine structure constants A parallel, A perpendicular) of rare earth ion Sm3+ in fluoride crystals KY3F10 and LiYF4 from the perturbation formulas of EPR parameters for a 4f5 ion in tetragonal symmetry. In these formulas, the crystal-field J-mixing of the first and second excited-state multiplets 6H(7/2) and 6H(9/2) into the ground state multiplet 6H(5/2), the mixtures among the states with the same J value via spin-orbit coupling interaction and the interactions between the ground Kramers doublet Gammagamma and the same irreducible representation as Gammagamma in other 11 Kramers doublets Gammax within 6HJ (J=5/2, 7/2, 9/2) states via crystal-field and orbital angular momentum (or hyperfine structure) are considered. The calculated results (which are in agreement with the observed values) are discussed.     

Synthesis of a novel host molecule of cross-linking-polymeric-beta-cyclodextrin-o-vanillin furfuralhydrazone and spectrofluorimetric analysis of its identifying cadmium

A novel host inclusion complex of cross-linking-polymeric-beta-cyclodextrin-o-vanillin furfuralhydrazone (beta-CDP-OVFH) was synthesized and characterized with IR and 1H NMR spectra to confirm its structure. The coordination reaction of the host reagent with Cd(2+) was studied and the optimum reacting conditions were observed carefully. A highly selective and sensitive spectrofluorimetric determination of trace amount of cadmium was proposed based on the reaction of Cd(2+) with beta-CDP-OVFH in ammonia water-ammonium acetate buffer medium of pH = 11.0. The molar ratio of beta-CDP-OVFH to Cd(2+) was 1:1. The maximum excitation and emission wavelengths were 393 and 494 nm, respectively. The linear range of this method was from 3.0 to 500 microg l(-1) with a detection limit of 0.80 microg l(-1). The effect of interferences in the determination of cadmium was investigated and the results showed that the host reagent had quite high capacity of identifying Cd(2+). The proposed method was successfully applied to the determination of trace amount of Cd(2+) in mussel and tea samples.     

Total synthesis of ingenol

A total synthesis of the biologically important diterpene ingenol has been completed. Ring-closing olefin metathesis was used to construct the strained "inside-outside" tetracyclic skeleton, and a series of diastereoselective reactions were employed to complete the synthesis. Another naturally occurring ingenane, 20-deoxyingenol, has also been prepared.     

Transition metal coordination polymers with polycarboxylic acid as bridging ligands: Synthesis and structure characterization of [Fe(μ4-bta)0.5(phen)(OH)]<Subscript>n</Subscript>

A new 2D (two-dimensional) coordination polymer, [Fe(μ4-bta)o.5(phen)(OH)]_n (1), has been hydrothermally synthesized with FeCl₃ 6H₂, Na₄bta (h₄bta = 1,2,4,5-benzentetracarboxylic acid), 1,10-phen (1,10-phenanthroline) and H₂O as raw materials. The crystals of the compound belong to monoclinic P2₁/n space group, a = 1.0129(2) nm, b = 0.9265(2) nm, c = 1.5696(3) nm, β=91.37(3)°V=1.4721(5) nm³,Z=3, final R₁=0.0292, wR ₂=0.0798 for 2572 [/>2σ(/)] observed reflections. The result of structure determination shows that in the compound each bta ligand is connected with four Fe³, forming a new μ4-coordination mode. Four deprotonated carboxylic groups of bta link to Fe³ ions alternatively through monodentate and bidentate coordination fashion, constructing 2D layer network. The measurement of variable temperature magnetic susceptibility indicates that there exist antiferromagnetic interactions between Fe³ ions in the compound. The TGA spectrum displays relatively fine thermal stability of the compound. In addition, IR and UV-Vis spectra of compound 1 have also been measured.