Polarity‐based fractionation in proteomics: hydrophilic interaction vs reversed‐phase liquid chromatography

During recent decades, hydrophilic interaction liquid chromatography (HILIC) ahs been introduced to fractionate or purify especially polar solutes such as peptides and proteins while reversed‐phase liquid chromatography (RPLC) is also a common strategy. RPLC is also a common dimension in multidimensional chromatography. In this study, the potential of HILIC vs RPLC chromatography was compared for proteome mapping of human peripheral blood mononuclear cell extract. In HILIC a silica‐based stationary phase and for RPLC a C₁₈ column were applied. Then separated proteins were eluted to an ion trap mass spectrometry system. Our results showed that the HILIC leads to more proteins being identified in comparison to RPLC. Among the total 181 identified proteins, 56 and 38 proteins were fractionated specifically by HILIC and RPLC, respectively. In order to demonstrate this, the physicochemical properties of identified proteins such as polarity and hydrophobicity were considered. This analysis indicated that polarity may play a major role in the HILIC separation of proteins vs RPLC. Using gene ontology enrichment analysis, it was also observed that differences in physicochemical properties conform to the cellular compartment and biological features. Finally, this study highlighted the potential of HILIC and the great orthogonality of RPLC in gel‐free proteomic studies. Copyright © 2015 John Wiley & Sons, Ltd.     

Synthesis and application of modified silica sulfuric acid as a solid acid heterogeneous catalyst in Michael addition reactions

Modified silica sulfuric acid (MSSA) as a new type of silica sulfuric acid was prepared and effectively used in the conjugate addition of indole, pyrrole, and thiols with Michael acceptors under mild conditions at room temperature. Also, MSSA was used as a catalyst for the synthesis of 1,1,3‐tri‐indolyl compounds in good to excellent yield at room temperature. J. Heterocyclic Chem., (2011).     

The Effect of Morphological and Topological Characteristics on Effective Diffusivity and Permeability of Dual-Structural-Scale Synthetic Porous Medium

Transport in Porous Media - Image-based simulations at pore scale provide direct insight into the impact of the microstructure on flow and transport processes in porous media. Diffusion is an...     

Green and effective route for the synthesis of monodispersed palladium nanoparticles using herbal tea extract (Stachys lavandulifolia) as reductant,stabilizer and capping agent,and their application as homogeneous and reusable catalyst in Suzuki coupling reactions in water

A simple and eco‐friendly procedure has been devised for the green synthesis of palladium nanoparticles, using the aqueous extract of herbal tea (Stachys lavandulifolia), a renewable and nontoxic natural phyto‐exudate. The water‐soluble components of the extract act as reducing agent and stabilizer. This green route does not require a surfactant or capping agent for the growth of palladium nanoparticles. The generated nanoparticles were analysed using UV–visible spectroscopy, transmission electron microscopy, X‐ray diffraction, Fourier transform infrared spectroscopy, scanning electron microscopy, energy dispersive X‐ray analysis and inductively coupled plasma. The palladium nanoparticles having spherical shape and dimensions of between 5 and 7 nm were employed as a homogeneous catalyst for Suzuki coupling reactions conducted in water under mild conditions. Good yields of products, a facile work‐up, no evidence of leached palladium from the catalyst surface and smooth recovery of the catalysis by adding ethyl acetate, which could be reused at least eight times, confirm the very good efficiency of the catalytic reaction. Copyright © 2014 John Wiley & Sons, Ltd.     

Synthesis and characterization of a novel solvent-free dextran-HEMA-PNIPAM thermosensitive nanogel

In recent years, the polymeric nanogels, as a group of nanostructured materials, have attracted the attention of researchers of various fields such as polymers, materials science, pharmacy, and drug delivery. Gels are mostly known for their water-swellable features and are candidates for a variety of applications. In this work, a facile solvent free synthesis procedure for production of dextran-hydroxyethyl methacrylate (Dex-HEMA) and poly N-isopropyl acryl amide (PNIPAM) copolymeric nanogels is narrated. The polymerization process was conducted by the UV irradiation and the gel size was controlled by the liposomal structures. The H-NMR and FTIR analysis were all proved a successful polymerization procedure. By implication of the dynamic light scattering (DLS), the mean diameter of particles was determined to be in the range of ca. 350 nm. The molecular weight determination by the GPC results in the Mw ranging from 16100 to 20900 gr mol^?1 with a polydispersity index of ca. 1.5. The turbidity assay indicated the thermosensitive nature of the gels and a LCST of ca. 32.5 was characterized. In this work, the equilibrium swelling measurements and the water content studies at two temperatures of 25 and 37°C were also performed.     

Electro-catalyzed multicomponent transformation of 3-methyl-1-phenyl-1H-pyrazol-5(4H)-one to 1,4-dihydropyrano[2,3-c]pyrazole derivatives in green medium

An efficient and convenient synthesis of 1,4-dihydropyrano[2,3-c]pyrazole derivatives is described, using the electrogenerated anion of ethanol as the base in the presence of sodium bromide as an supporting electrolyte in a one-pot, three component condensation of malononitrile, aromatic aldehydes and 3-methyl-1-phenyl-1H-pyrazol-5(4H)-one. The reaction is carried out in an undivided cell containing an iron electrode as the cathode and a graphite electrode as the anode, at a constant current at room temperature.     

Application of Net Analyte Signal Standard Addition Method (NASSAM) for Simultaneous Determination of Lead and Tin by Differential Pulse Polarography

Differential pulse polarography was used for simultaneous determination of Sn²⁺ and Pb²⁺. But there is a problem for simultaneous determination and it is high overlapped DPPs of mentioned cations that their determination is impossible in the presence of each other, so multivariate calibration methods as chemomatrics methods were used for this determination. There are some disadvantageous for multivariate calibration methods that can be solved by a new and simple method called net analyte signal standard addition method. This method has some advantages, such as: the use of a full voltammogram, realization in a single step, therefore it does not require calibration and prediction steps and only a few measurements are required for the determination.