The adsorption behavior of PHB depolymerase from R. pickettii T1 on a silicon wafer and on P(3HB) single crystals has been studied by real-time and AFM in air and a buffer solution. First, the morphology of PHB depolymerase adsorbed on a silicon wafer was characterized to show that one molecule of PHB depolymerase has dimensions of 2.2 +/- 0.7 nm height and 16 +/- 5 nm width. The observation of PHB depolymerase adsorbed on a P(3HB) single crystal indicated that the dimensions of enzyme on the crystalline surface in air were 1.2 +/- 0.5 nm high and 28 +/- 7 nm wide, while enzyme molecules with dimensions of 2.1 +/- 0.6 nm height and 16 +/- 7 nm width were detected in a buffer solution. Comparison of the dimensions of PHB depolymerase in air with those in a buffer solution showed that the enzyme was squashed in air, but not in a buffer solution. In addition, the influence of enzymatic adsorption on the molecular state of the P(3HB) crystalline surface was investigated. The AFM images of P(3HB) single crystals after enzymatic adsorption and washing with ethanol indicated that the adhesion of PHB depolymerase changed the molecular state and generated holes on the crystalline surface. 相似文献
A Lamb wave interdigital transducer mounted on a layered substrate composed of two plates, a thin piezoelectric ceramic plate and an acrylic plate, operating at a liquid-solid boundary, is investigated for ultrasonic nondestructive testing of the layer thickness in human teeth. A higher-order mode having a phase velocity higher than the longitudinal wave velocity in the human teeth can be used for nondestructive testing. In the combination of the two layers, the fourth mode of leaky Lamb wave is most favorable for a frequency-controllable radiation angle of an ultrasound beam into a water layer as an acoustic coupler. In the configuration of an acoustic delay line, the layer-thickness measurement in vivo, evaluated from the time interval between two reflected ultrasound echoes, is successfully realized under a thin water layer as the acoustic coupler. 相似文献
Inferences about the evolutionary history of biological sequence data are greatly influenced by the presence of recombination,
that tends to disrupt the phylogenetic signal. Current recombination detection procedures focus on the phylogenetic disagreement
of the data along the aligned sequences, but only recently the link between the quantification of this disagreement and the
strength of the recombination was realised. We previously described a hierarchical Bayesian procedure based on the distance
between topologies of neighbouring sites and a Poisson-like prior for these distances. Here, we confirm the improvement provided
by this topology distance and its prior over existing methods that neglect this information by analysing datasets simulated
under a complex evolutionary model. We also show how to obtain a mosaic structure representative of the posterior sample based
on a newly developed centroid method. 相似文献
The C2-side chain hydroxyl group of 1,3-cycloalkanedione discriminates between two ketones depending on its chirality. It chooses one ketone to form hydrogen bond with the oxygen atom of the TBDPS-oxymethyl group, but chooses the other ketone upon conversion to the isopropyl acetal. Two optically pure diastereomers, whose absolute configuration at the angular position is opposite for each other, were thus synthesized from this single chiral source through simple operations. This method may be applied for the synthesis of a variety of compounds with asymmetric quaternary centers. 相似文献
Synthesis of beauveriolide III (1b), which is an inhibitor of lipid droplet accumulation in macrophages, was achieved by solid-phase assembly of linear depsipeptide using a 2-chlorotrityl linker followed by solution-phase cyclization. On the basis of this strategy, a combinatorial library of beauveriolide analogues was carried out by radio frequency-encoded combinatorial chemistry. After automated purification using preparative reversed-phase HPLC, the library was tested for inhibitory activity of CE synthesis in macrophages to determine structure-activity relationships of beauveriolides. Among them, we found that diphenyl derivative 7{9,1} is 10 times more potent than 1b. 相似文献
A 24-member combinatorial library based on the structure of aeruginosin 298-A (1a) was synthesized utilizing solid-phase, and their inhibitory activity against trypsin was evaluated. Among the library, we found that D-Hpla-D-Leu-L-Choi-Agma (1h) is 300 times more potent than the parent natural product 1a. 相似文献
Enzymatic degradation of poly[(R)‐3‐hydroxybutyrate] (P(3HB)) film by the poly(hydroxybutyrate) (PHB) depolymerase from Ralstonia picketti T1 was studied in 0.01 M phosphate buffer solution (pH 7.4) at 37 °C by using a quartz crystal microbalance (QCM) technique. Enzymatic degradation of P(3HB) film was quantitatively followed by QCM as a positive frequency shift. While, the amount of depolymerases adsorbed on the film could be evaluated as a negative frequency shift by using a mutant enzyme which had no hydrolytic activity in a catalytic site. The degradation rate increased with enzyme concentration to reach a maximum value at 1.0 μg · mL?1, and then the rate decreased at higher enzyme concentration. This enzyme concentration dependence could be quantitatively explained in terms of a change of coverage of the film surface by the adsorbed enzyme. When the wild‐type enzyme solution in a QCM cell was replaced with the mutant enzyme solution in the middle of the reaction, the degradation rate was reduced markedly, indicating that the wild‐type enzyme adsorbed on the P(3HB) surface is easily substituted by the mutant enzyme in the solution. On the other hand, replacement of the wild‐type enzyme solution with other proteins or buffer solutions did not affect the degradation rate at all, suggesting that the adsorbed enzyme was not desorbed from the film surface. Thus, the adsorbed PHB depolymerase is released from the P(3HB) surface only by interaction with the same depolymerase in solution.
Time courses of frequency changes (ΔF) or weight changes (Δw) observed during enzymatic degradation of P(3HB) film by PHB depolymerase from R. picketti T1 at 37 °C. 相似文献
The polarization of neutron spin, target nucleus spin and He nuclear spin was developed at KEK for measuring the T-odd term in polarized neutron transmission through a polarized nuclear target. A method to measure the neutron spin rotation was developed for the T-violation experiment. This apparatus has been found to be quite useful for the P-violating neutron spin rotation experiment. The angular distribution of neutron-capture -rays was measured for the study of the enhancement mechanism of the P-violation. The results are also discussed.On leave from Tohoku University. 相似文献
Collagen model peptide (Pro-Pro-Gly)10 has a triple helical structure and undergoes a thermal transition to a single random coil structure. The transition temperature of the analogous model peptides depends largely on amino acid substitution. Substitution of Pro by 4-hydroxyproline (Hyp) or 4-fluoroproline (fPro) has especially attracted attention because the position of substitution and chirality of the hydroxyl group or fluorine atom affect the transition temperatures. Here, we demonstrated that (4(S)-fPro-Pro-Gly)10 takes a triple helical structure, but (4(R)-fPro-Pro-Gly)10 exists in a single chain structure. This is not consistent with the case of Hyp substitution in our previous report where both (4(S)-Hyp-Pro-Gly)10 and (4(R)-Hyp-Pro-Gly)10 are in a single random coil state. 相似文献