Single chain force spectroscopy - Reading the sequence of HP protein models

We study the elastic properties of single A/B random copolymer chains, with a specific sequence and use them as theoretical model for so called HP proteins. HP proteins carry hydrophilic (P) and hydrophobic (H) monomers. We predict a rich structure in the force-extension relations which can be attributed to the information in the sequence. The variational method is used to probe local minima on the path of stretching and releasing for the chain molecules. At a given force, we find multiple configurations which are separated by energy barriers. A collapsed globular configuration consists of several domains which unravel cooperatively. Upon stretching, the unfolding path shows a stepwise pattern corresponding to the unfolding of each domain. While releasing, several cores can be created simultaneously in the middle of the chain, resulting in a different path of collapse. The long-range interactions and stiffness of the chain simplify the potential landscape given by the disorder in sequence. Received 5 March 2002 / Received in final form 16 May 2002 Published online 13 August 2002     

Controlling global stochasticity of Hamiltonian systems by nonlinear perturbation

A method of controlling global stochasticity in Hamiltonian systems by applying nonlinear perturbation is proposed. With the well-known standard map we demonstrate that this control method can convert global stochasticity into regular motion in a wide chaotic region for arbitrary initial condition, in which the control signal remains very weak after a few kicks. The system in which chaos has been controlled approximates to the original Hamiltonian system, and this approach appears robust against small external noise. The mechanism underlying this high control efficiency is intuitively explained. Received 15 January 2002 Published online 6 June 2002     

A new three-flavor oscillation solution of the solar neutrino deficit in <Emphasis Type="Italic">R</Emphasis>-parity violating supersymmetry

We present a solution of the solar neutrino deficit using three flavors of neutrinos and R-parity non-conserving supersymmetry. In this model, in vacuum, the is massless and unmixed, mass and mixing being restricted to the - sector only, which we choose in consistency with the requirements of the atmospheric neutrino anomaly. The flavor changing and flavor diagonal neutral currents present in the model and the three-flavor picture together produce an energy dependent resonance-induced - mixing in the sun. This mixing plays a key role in the new solution to the solar neutrino problem. The best fit to the solar neutrino rates and spectrum (1258-day SK and 241-day SNO data) requires a mass square difference of eV² in vacuum between the two lightest neutrinos. This solution cannot accommodate a significant day-night effect for solar neutrinos nor CP violation in terrestrial neutrino experiments. Received: 26 December 2001 / Revised version: 16 February 2002 / Published online: 26 July 2002     

Constraint Molecular Dynamics and results on isotopic distributions produced in heavy ion collision — The Sn + Ni systems

The Constraint Molecular Dynamics approach is illustrated together with calculation on different heavy ion collisions. In particular the charge-mass distribution produced in the collision ¹²⁴Sn + ⁶⁴Ni and ¹¹²Sn + ⁵⁸Ni at 35 MeV/nucleon is discussed. By comparing the Y = (N ? Z)/A distributions for fragments produced in central collisions it results that this observable can be sensitive to the dynamic effects induced on the two systems by the different charge/mass ratio.     

Reception of a Signal with Unknown Duration

The maximum likely and optimal (Bayesian) algorithms for detecting an arbitrary-shaped signal observed against the background of Gaussian white noise and for measuring the duration are synthesized. Exact expressions for the characteristics of the maximum likely algorithms are found. The characteristics of the Bayesian algorithms are obtained using computer simulations.     

Spontaneous formation of a system of highly ordered germanium nanoislands upon epitaxial deposition on profiled (111) silicon substrates under electromigration conditions

Atomic-force microscopy was used to study the surface topography of SiGe structures grown by epitaxial deposition of Ge on profiled Si(111) substrates under electromigration conditions. Systems of highly ordered germanium nanosized islands with dimensions of 10–20 nm and a density of 6×10¹⁰ cm^?2 were obtained. It is shown that the geometrical parameters of self-organizing nanoislands can be controlled by a proper choice of the growth and postgrowth annealing conditions for these structures.     

Synthesis and structures of nitroxyalkyl methylphosphonates

The reactions of ethylene glycol mononitrate and glycerol 1,3-dinitrate with methylphosphonic dichloride afforded new nitroxyalkyl methylphosphonates.     

Synthesis of N-substituted xanthines (review)

The literature on the synthesis of N-substituted xanthines by cyclization, recyclization, and N-substitution is reviewed.Translated from Khimiya Geterotsiklicheskikh Soedinenii, No. 1, pp. 3–27, January, 1991.     

Localized bifurcations and defect instabilities in the convection of a nematic liquid crystal

The stationary and the time-dependent homogeneous ordered states in convection may both become unstable against localized perturbations. Defects are then created and they may contribute to the disorganization of the homogeneous state. We present an experimental study of defects in some homogeneous stationary structures as well as in the traveling-wave states of convection of a nematic liquid crystal. We show that the core of the defects is a germ of the unstable state and it can become unstable under the external stress. Then, either fully homogeneous states with the symmetry of the core, or complex disordered states can develop from the local instability of defects in processes quite similar to displacive transitions in solids. Some of the main features are qualitatively similar to numerical simulations of an appropriate Landau-Ginzburg equation.     

Dynamic polarization of lipid bilayers as a special case in the electrochemistry of liquid/liquid interfaces

Dynamically obtained current/voltage curves of bilayer lipid membranes partitioning a solution of lipophilic ions are compared with the results of the type expected in a voltammetry experiment involving ionic transport across a liquid/liquid interface. Lipophilic ions yielding “voltammograms” analogous to reversible and irreversible voltammograms (in conventional electrochemical systems) are reported. Also reported are examples of ions which yield what may be analogous to a masked response, a phenomenon known in the literature of liquid/liquid interfaces. Although the behavior of the two systems is similar, there exist differences in the interpretation of the voltammograms and suggestions are offered for an energetic and mechanistic interpretation of the membrane voltammogram.