Diluting the hydrogen bonds in viscous solutions of n-butanol with n-bromobutane: II. A comparison of rotational and translational motions

Mixtures of the monohydroxy alcohol n-butanol with n-bromobutane are investigated via dielectric and nuclear magnetic resonance (NMR) techniques. Static- and pulsed-field gradient proton NMR yielded self-diffusion coefficients as a function of concentration and temperature. To monitor reorientational motions, broadband dielectric and (13)C-spin relaxation time measurements were carried out. The latter demonstrate that the structural relaxation stems from the motion of the alkyl chains. By combining data from translational diffusion coefficients with published shear viscosities, hydrodynamic radii were determined that compare favorably with the van der Waals radii of single molecules. The results for the neat alcohol and for the binary mixtures are discussed with respect to a recent transient chain model. The approach of Debye and structural relaxation times at high temperatures, identified as a general feature of monohydroxy alcohols, is also discussed within that framework.     

Radio-gas-chromatographische Analyse der 11C-markierten isotopen ?thylene und Acetylene

Zusammenfassung Die radio-gas-chromatographische Trennung der isotopen Äthylene C₂H₄, C₂H₃D und C₂H₂D₂ mit Hilfe einer kontinuierlichen Umlaufmethode unter Benutzung hochwirksamer Silbernitrat-Äthylenglykol-Kolonnen wird beschrieben. Durch Vorschaltung eines (diskontinuierlichen) Reduktionsprozesses mit Chrom(II)-chlorid, der ohne nachweisbaren Isotopenaustausch verläuft, läßt sich diese Methode auch auf die Analyse der isotopen Acetylene: HCCH, DCCH und DCCD anwenden. Der bedeutsamste Vorteil der hier beschriebenen Apparatur ist der gegenüber der konventionellen Einsäulen-Gas-Chromatographie erzielte Zeitgewinn, der besonders bei der Analyse mit kurzlebigen Radioisotopen markierter Verbindungen von ausschlaggebender Bedeutung ist.

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Summary The gas-chromatographic separation of the isotopic ethylenes: C₂H₄, C₂H₃D and C₂H₂D₂ is achieved by using highly efficient silver nitrate/ethyleneglycol columns in combination with a recycling method. The analysis of the three isotopic acetylenes: HCCH, HCCD and DCCD is accomplished by reducing these compounds with chromous chloride solution to the corresponding ethylenes prior to the gas-chromatographic separation. (No isotopic exchange occurs during the reduction process.)One of the advantages of the described method is that separations of the isotopic compounds are obtained in a much shorter time than with the conventional one-column technique, which is of great importance in the radio-gas-chromatography of isotopic molecules labeled with short-lived radioisotopes.

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Nach Arbeiten, die mit Mitteln der U.S. Atomenergie-Kommission ausgeführt wurden.

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Die Autoren danken Dr. D. R. Christman, der freundlicherweise die Reduktionen der Acetylene durchführte und Standardproben der benötigten deuterierten Verbindungen herstellte.     

Design of new plasmepsin inhibitors: a virtual high throughput screening approach on the EGEE grid

Though different species of the genus Plasmodium may be responsible for malaria, the variant caused by P. falciparum is often very dangerous and even fatal if untreated. Hemoglobin degradation is one of the key metabolic processes for the survival of the Plasmodium parasite in its host. Plasmepsins, a family of aspartic proteases encoded by the Plasmodium genome, play a prominent role in host hemoglobin cleavage. In this paper we demonstrate the use of virtual screening, in particular molecular docking, employed at a very large scale to identify novel inhibitors for plasmepsins II and IV. A large grid infrastructure, the EGEE grid, was used to address the problem of large computation resources required for docking hundreds of thousands of chemical compounds on different plasmepsin targets of P. falciparum. A large compound library of about 1 million chemical compounds was docked on 5 different targets of plasmepsins using two different docking software, namely FlexX and AutoDock. Several strategies were employed to analyze the results of this virtual screening approach including docking scores, ideal binding modes, and interactions to key residues of the protein. Three different classes of structures with thiourea, diphenylurea, and guanidino scaffolds were identified to be promising hits. While the identification of diphenylurea compounds is in accordance with the literature and thus provides a sort of "positive control", the identification of novel compounds with a guanidino scaffold proves that high throughput docking can be effectively used to identify novel potential inhibitors of P. falciparum plasmepsins. Thus, with the work presented here, we do not only demonstrate the relevance of computational grids in drug discovery but also identify several promising small molecules which have the potential to serve as candidate inhibitors for P. falciparum plasmepsins. With the use of the EGEE grid infrastructure for the virtual screening campaign against the malaria causing parasite P. falciparum we have demonstrated that resource sharing on an eScience infrastructure such as EGEE provides a new model for doing collaborative research to fight diseases of the poor.     

Zum Ionenaustausch einwertiger Kationen an synthetischen Natriumpolysilicaten mit Schichtstruktur

Ion Exchange of Monovalent Cations in Synthetic Sodium Polysilicates with Layer Structure Cation-exchange equilibria of synthetic sodium polysilicates Ilerit (Na₂O · 8.3SiO₂ 8.9 H₂O) and Magadiite (Na₂O · 13 SiO₂ · 6.8 H₂O) with H⁺, Li⁺ and K⁺ Ions were investigated with respect to their selectivity behaviour. The range of ion selectivity is: H⁺ > Na⁺ > Li⁺ > K⁺. Thermodynamic data ΔG, ΔH, and ΔS were determined by means of the integral thermodynamic equilibria constants K_th of the ion-exchange reactions.     

3D assembly of semiconductor and metal nanocrystals: hybrid CdTe/Au structures with controlled content

A 3D metal ion assisted assembly of nanoparticles has been developed. The approach relies on the efficient complexation of cadmium ions and 5-mercaptomethyltetrazole employed as the stabilizer of both colloidal CdTe and Au nanoparticles. It enables in a facile way the formation of hybrid metal-semiconductor 3D structures with controllable and tunable composition in aqueous media. By means of critical point drying, these assemblies form highly porous aerogels. The hybrid architectures obtained are characterized by electron microscopy, nitrogen adsorption, and optical spectroscopy methods.     

Complexation and Self-Assembling of Sulfonatomethylated Calix[4]resorcinarene with Both Organic and Lanthanide Ions in Aqueous Media

The stoichiometry and binding constant of the paramagnetic lanthanide ion(Gd³⁺) with sulfonatomethylated calix[4]resorcinarene (H₈Xna₄) were evaluated from the NMR relaxation data. Both ¹H NMR spectroscopy and NMR relaxation data indicate that interaction of tetramethylammonium (TEMA) and N-methylpyridinium (MePy) cations with H₈Xna₄ in the presence of Ln³⁺ (Lu³⁺ or Gd³⁺) results in theformation of ternary complexes [Ln(G)H₈X] with lanthanide ions,coordinated via sulfonate groups and organic cation included intothe cavity of H₈Xna₄. The inclusion of long-chainedN-decyl-(DePy) and N-cetylpyridinium (CPy) ions into H₈Xna₄ cavity leads to self-assembling which can be revealed by NMR relaxation method with Gd³⁺ probe ions. The excess of alkylpyridinium or TEMA cations leads to disassembling of (Gd)_n(H₈X)_m(RPy)_maggregates.     

Discriminating bacteria from other atmospheric particles using femtosecond molecular dynamics

We investigated femtosecond pump–repump depletion schemes in biological fluorophors (tryptophan and riboflavin) in order to discriminate bioaerosols from organic interferents emitted by combustion (traffic related urban aerosols). Although fluorescence depletion is significative for riboflavin (Rbf, Vitamin B2), the most striking results have been obtained for the amino acid tryptophan (Trp). By using a 270 nm-pump 810 nm-repump femtosecond excitation, we showed that Trp exhibits fluorescence depletion up to 50%, contrary to naphthalene (<2%), despite almost identical absorption/emission spectra. We demonstrate that this process in Trp is so robust that it still occurs in living bacteria (Bacillus subtilis, Escherechia coli and Enterococcus fæcalis) but is absent for pure diesel fuel. This remarkable difference between biological and organic aerosols can be exploited to discriminate among them.     

Photochemische Reaktionen 94. Mitteilung. Vinyloge β-Spaltung bei Epoxy-enonen der Jonon-Reihe

Photoinduced Vinylogous β-Cleavage of Epoxy-enones of the Ionone Series The photochemistry of the α,β-unsaturated γ,δ-epoxy-enones 1–3 is determined by: (i) C(γ)-O-scission of the epoxide (vinylogous β-cleavage of Type A); (ii) C(γ)-C(δ)-cleavage of the oxirane (vinylogous β-cleavage of Type B); (iii) (E/Z)-isomerization of the enone chromophore. In contrast, 4 with tertiary C(β) shows no Type B cleavage. Type A cleavage is induced both by n,π*- and π,π*-excitation and arises probably from the T₁-state, but Type B cleavage is observed only on π,π*-excitation and represents presumably a S₂-reaction. On Type A cleavage 1–4 undergo 1,2-alkyl-shifts to 1,5-dicarbonyl compounds ( 15–18, 25–28, 34 and 35 ) or rearrange to dihydrofuranes ( 7 and 30 ). The isomerization 1→7 proceeds by a stereoselective [1,3]-sigmatropic shift. On Type B cleavage 1–3 isomerize to a bicyclic enol-ether ( 8, 29 ) or to a monocyclic enol-ether ( 9 ; product of a homosigmatropic [1,5]-shift) or undergo fragmentation to isomers such as allenes 10, 22 and 31 or cyclopropenes 11 and 21 . The non-isolated, unstable (Z)-epoxy-enones 14, 19, 24 and 38 isomerize by fragmentation to the furanes 12, 23, 33 and 39 respectively, on contact with traces of acid or by heating. However, for 19 and 4 , Type B cleavage may lead to the furanes 23 and 39 . On UV. irradiation of the epoxy-enone 4 the initially formed (E/Z)-isomers 34 and 35 yield on π,π*-excitation the enones 37 and 40 by a vinylogous β-fragmentation. In addition, on n,π*-excitation 34 isomerizes to 35 , which decarbonylates exclusively to the enone 37 . The reactions of 1–4 with BF₃ · O(C₂H₅)₂ were also studied (see appendix). The epoxy-enones 1 and 2 isomerize by an 1,2-alkyl shift in good yield to the 1,4-dicarbonyl compounds 79 and 81 , whereas 3 gives the 1,4-diketone 83 , and in small amounts the 1,5-diketone 84 . On the other hand, 4 is converted to the fluorohydroxy-enone 85 and to the 1,5-dicarbonyl product 34 , the only isomer in this series which is identical with one of the photoproducts.