Zn2+-dependent peptide nucleic acids probes

Binding of bis-picolylamine-naphthalene diimide-peptide nucleic acid conjugates to complementary DNA is strongly dependent upon Zn2+; ultimately, hybridization is switched ON in the presence muM Zn2+.     

Spontaneous Assembly of Miktoarm Stars into Vesicular Interpolyelectrolyte Complexes

Mixing a bis‐hydrophilic, cationic miktoarm star polymer with a linear polyanion leads to the formation of unilamellar polymersomes, which consist of an interpolyelectrolyte complex (IPEC) wall sandwiched between poly(ethylene oxide) brushes. The experimental finding of this rare IPEC morphology is rationalized theoretically: the star architecture forces the assembly into a vesicular shape due to the high entropic penalty for stretching of the insoluble arms in non‐planar morphologies. The transmission electron microscopy of vitrified samples (cryogenic TEM) is compared with the samples at ambient conditions (in situ TEM), giving one of the first TEM reports on soft matter in its pristine environment.

     

Different rotamer states of cytosine nucleobases in heteronuclear PtPd-, PtPd2, and Pt2Pd2Ag complexes derived from [Pt(2,2'-bpy)(1-MeC-N3)2]2+ (1-MeC = 1-methylcytosine): first examples of species with head-head oriented 1-MeC(-) ligands

[Pt(2,2'-bpy)(1-MeC-N3)(2)](NO(3))(2) (1) (2,2'-bpy = 2,2'-bipyridine; 1-MeC = 1-methylcytosine) exists in water in an equilibrium of head-tail and head-head rotamers, with the former exceeding the latter by a factor of ca. 20 at room temperature. Nevertheless, 1 reacts with (en)Pd(II) (en = ethylenediamine) to give preferentially the dinuclear complex [Pt(2,2'-bpy)(1-MeC(-)-N3,N4)(2)Pd(en)](NO(3))(2)·5H(2)O (2) with head-head arranged 1-methylctosinato (1-MeC(-)) ligands and Pd being coordinated to two exocyclic N4H(-) positions. Addition of AgNO(3) to a solution of 2 leads to formation of a pentanuclear chain compound [{Pt(2,2'-bpy)(1-MeC(-))(2)Pd(en)}(2)Ag](NO(3))(5)·14H(2)O (5) in which Ag(+) cross-links two cations of 2 via the four available O2 sites of the 1-MeC(-) ligands. 2 and 5 appear to be the first X-ray structurally characterized examples of di- and multinuclear complexes derived from a Pt(II) species with two cis-positioned cytosinato ligands adopting a head-head arrangement. (tmeda)Pd(II) (tmeda = N,N,N',N'-tetramethylethylenediamine) and (2,2'-bpy)Pd(II) behave differently toward 1 in that in their derivatives the head-tail orientation of the 1-MeC(-) nucleobases is retained. In [Pt(2,2'-bpy)(1-MeC(-))(2){Pd(2,2'-bpy)}(2)](NO(3))(4)·10H(2)O (4), both (2,2'-bpy)Pd(II) entities are pairwise bonded to N4H(-) and O2 sites of the two 1-MeC(-) rings, whereas in [Pt(2,2'-bpy)(1-MeC(-))(2){Pd(tmeda)}(2)(NO(3))](NO(3))(3)·5H(2)O (3) only one of the two (tmeda)Pd(II) units is chelated to N4H(-) and O2. The second (tmeda)Pd(II) is monofunctionally attached to a single N4H(-) site. On the basis of these established binding patterns, ways to the formation of mixed Pt/Pd complexes and possible intermediates are proposed. The methylene protons of the en ligand in 2 are special in that they display two multiplets separated by 0.64 ppm in the (1)H NMR spectrum.     

Influence of donor-acceptor distance variation on photoinduced electron and proton transfer in rhenium(i)-phenol dyads

A homologous series of four molecules in which a phenol unit is linked covalently to a rhenium(I) tricarbonyl diimine photooxidant via a variable number of p-xylene spacers (n = 0-3) was synthesized and investigated. The species with a single p-xylene spacer was structurally characterized to get some benchmark distances. Photoexcitation of the metal complex in the shortest dyad (n = 0) triggers release of the phenolic proton to the acetonitrile/water solvent mixture; a H/D kinetic isotope effect (KIE) of 2.0 ± 0.4 is associated with this process. Thus, the shortest dyad basically acts like a photoacid. The next two longer dyads (n = 1, 2) exhibit intramolecular photoinduced phenol-to-rhenium electron transfer in the rate-determining excited-state deactivation step, and there is no significant KIE in this case. For the dyad with n = 1, transient absorption spectroscopy provided evidence for release of the phenolic proton to the solvent upon oxidation of the phenol by intramolecular photoinduced electron transfer. Subsequent thermal charge recombination is associated with a H/D KIE of 3.6 ± 0.4 and therefore is likely to involve proton motion in the rate-determining reaction step. Thus, some of the longer dyads (n = 1, 2) exhibit photoinduced proton-coupled electron transfer (PCET), albeit in a stepwise (electron transfer followed by proton transfer) rather than concerted manner. Our study demonstrates that electronically strongly coupled donor-acceptor systems may exhibit significantly different photoinduced PCET chemistry than electronically weakly coupled donor-bridge-acceptor molecules.     

Nitroxide‐mediated Living Radical Polymerization of Styrene with Fluorescent Initiator

A fluorescence method was used for determination of marked chain ends in polystyrene samples prepared by 4‐substituted TEMPO type nitroxide‐mediated living free radical polymerization of styrene. 2,2,6,6‐Tetramethyl‐1‐(1‐phenylethoxy)‐piperidin‐4‐yl‐4‐pyren‐1‐ylbutanoate (PYNOR) was prepared and used as an unimolecular initiator bearing pyrene as a fluorescence mark on mediating nitroxide fragment. The bulk polymerization of styrene at 120°C, in the presence of new unimolecular initiator, was a typical nitroxide mediated living radical polymerization. For comparison, two different molar ratios of initiator and monomer (1∶400 and 1∶1000 initiator ‐ monomer [I:M]) were used for polymerization. When I:M=1∶400, the obtained polydispersity was 1.12 and maximum molecular weight 27,000 g/mol was obtained at 62% conversion. For ratio 1∶1000, slightly higher polydispersity was obtained ?1.26 and the molecular weight was 53,000 g/mol at 70% conversion. The content of the polystyrene chains bearing mediating nitroxide fragment was determined by fluorescence spectroscopy. The intensity of pyrene fluorescence decreased as the molar mass, and the conversion increased as well. The extent of the incorporation of chromophore at propagating chain end or “livingness” of polymerization decreased despite the fact that the polydispersity did not change. The extent of side reaction leading to broadening of polydispersity is suppressed due to the high viscosity of the system at higher conversion. A low extent of “livingness” will have a very negative effect on possible preparation of block copolymers.     

Psoromic acid is a selective and covalent Rab-prenylation inhibitor targeting autoinhibited RabGGTase

Post-translational attachment of geranylgeranyl isoprenoids to Rab GTPases, the key organizers of intracellular vesicular transport, is essential for their function. Rab geranylgeranyl transferase (RabGGTase) is responsible for prenylation of Rab proteins. Recently, RabGGTase inhibitors have been proposed to be potential therapeutics for treatment of cancer and osteoporosis. However, the development of RabGGTase selective inhibitors is complicated by its structural and functional similarity to other protein prenyltransferases. Herein we report identification of the natural product psoromic acid (PA) that potently and selectively inhibits RabGGTase with an IC(50) of 1.3 μM. Structure-activity relationship analysis suggested a minimal structure involving the depsidone core with a 3-hydroxyl and 4-aldehyde motif for binding to RabGGTase. Analysis of the crystal structure of the RabGGTase:PA complex revealed that PA forms largely hydrophobic interactions with the isoprenoid binding site of RabGGTase and that it attaches covalently to the N-terminus of the α subunit. We found that in contrast to other protein prenyltransferases, RabGGTase is autoinhibited through N-terminal (α)His2 coordination with the catalytic zinc ion. Mutation of (α)His dramatically enhances the reaction rate, indicating that the activity of RabGGTase is likely regulated in vivo. The covalent binding of PA to the N-terminus of the RabGGTase α subunit seems to potentiate its interaction with the active site and explains the selectivity of PA for RabGGTase. Therefore, psoromic acid provides a new starting point for the development of selective RabGGTase inhibitors.     

Inkjet printing of reinforcing patterns for the mechanical stabilization of fragile polymeric microsieves

Inkjet printing is employed to apply a mechanically stable reinforcing pattern to polymeric microsieves prepared by float casting, where particles are used as molds for the pores. A mixture of silica particles and nonvolatile monomers is cast onto a water surface and subsequently photopolymerized to produce membranes consisting of a polymer film with embedded particles. These composite membranes are transferred onto an aluminum foil. Subsequently, a UV-curable ink is directly inkjet-printed onto the membranes in line patterns of grids or honeycombs and cured by UV radiation to create a mechanically reinforcing pattern. Afterwards, the particles and the aluminum foil are removed by chemical etching. The reinforcing pattern overcasts 40% of the previously manufactured membrane, is mechanically stable, and gives the microsieves such a robustness that they can be handled in further manufacturing processes.     

Synthesis of CuCorePtShell Nanoparticles as Model Structures for Core–Shell Electrocatalysts by Direct Platinum Electrodeposition on Copper

The synthesis of Cu(core)Pt(shell) model catalysts by the direct electrochemical deposition of Pt on Cu particles is presented. Cu particles with an average diameter of 200 nm have been deposited on glassy‐carbon electrodes by double pulse electrodeposition from a copper sulfate solution. Subsequent deposition from a platinum nitrate solution under potential control allows for a high selectivity of the Pt deposition towards Cu. Using a combination of cyclic voltammetry, XPS and sputtering, the structure of the generated particles has been analyzed and their core–shell configuration proven. It is shown that the electrocatalytic activity for the oxygen reduction is similar to that of other PtCu catalyst systems. The synthesized structures could allow for the analysis of structure–activity relations of core–shell catalysts on the way to the simple and controlled synthesis of supported Cu(core)Pt(shell) nanoparticles as oxygen reduction catalysts.