Über Verbindungen mit Urotropin-Struktur, 37. Mitt.: Eine neue Methode zur Herstellung von Hydroxy-ketonen und Diketonen sowie ihre Anwendung auf die Synthese des 2,4-Dioxa-adamantan-Ringsystems

Zusammenfassung Es wird eine neue Methode zur Herstellung von Hydroxyketonen und Diketonen beschrieben, die im ersten Schritt der Reaktionsfolge die Umsetzung von Hydroxycarbonsäureestern mit Phenylsulfonalkylmagnesiumbromid zu -Sulfonylketonen erfordert. Diese werden dann im zweiten Schritt mit Al-Amalgam zu den Hydroxyketonen oder den Halbketalen der Diketone entschwefelt. Mit Hilfe dieser Reaktionsfolge gelang auch, ausgehend von 3,5-Dihydroxy-phenylessigsäureester, die Synthese des bisher noch unbekannten Ringsystems des 2,4-Dioxa-adamantans.Herrn Prof. Dr. habil.Friedrich Asinger zum 60. Geburtstag in freundschaftlicher Verbundenheit zugeeignet36. Mitt.:H. Stetter, J. Gärtner undP. Tacke, Chem. Ber.99, 1435 (1966).     

Bestimmung des Gleichgewichts der salpetrigen Säure mit Nitritacidium-Ion auf chemischem Wege

Zusammenfassung Die Struktur des Nitritacidium-Ions¹ kann nach einer Interpretation vonSeel mit der Mesomerie zwischen zwei Grenzzuständen A und B (s. S. 428) erklärt werden. Es ist anzunehmen, daß sich bei einer Verminderung der Aktivität des Wassers der Resonanzzustand des Ions in Richtung von A nach B verschiebt. In sehr schwach perchlorsaurer, wäßriger Lösung läßt sich die Gleichgewichtskonstante der Bildung des Nitritacidium-Ions aus salpetriger Säure und Wasserstoffion aus kinetischen Daten vonHermann Schmid näherungsweise berechnen. In sehr stark perchlorsaurer, wäßriger Lösung läßt sich diese Gleichgewichtskonstante unter Verwendung der SäurefunktionJ ₀ aus Gleichgewichtsmessungen des Salpetrigsäurezerfalles ermitteln. (Der gefundene Wert stimmt mit den vonSeel und vonDeno, Berkheimer, Evans undPeterson aus optischen Untersuchungen erhaltenen Werten und mit dem kürzlich vonGerhard Schmid undU. Neumann mit Hilfe der NO/NO⁺-Elektrode gemessenen Wert größenordnungsmäßig überein.) Der vonChallis undRidd gefundene Mediumeffekt bei der Diazotierung aromatischer Amine in perchlorsaurer, wäßriger Lösung kann durch die oben erwähnte Verschiebung in der Resonanzstruktur des Nitritacidium-Ions erklärt werden.     

Predicting 19F NMR Chemical Shifts: A Combined Computational and Experimental Study of a Trypanosomal Oxidoreductase–Inhibitor Complex

The absence of fluorine from most biomolecules renders it an excellent probe for NMR spectroscopy to monitor inhibitor–protein interactions. However, predicting the binding mode of a fluorinated ligand from a chemical shift (or vice versa) has been challenging due to the high electron density of the fluorine atom. Nonetheless, reliable ¹⁹F chemical-shift predictions to deduce ligand-binding modes hold great potential for in silico drug design. Herein, we present a systematic QM/MM study to predict the ¹⁹F NMR chemical shifts of a covalently bound fluorinated inhibitor to the essential oxidoreductase tryparedoxin (Tpx) from African trypanosomes, the causative agent of African sleeping sickness. We include many protein–inhibitor conformations as well as monomeric and dimeric inhibitor–protein complexes, thus rendering it the largest computational study on chemical shifts of ¹⁹F nuclei in a biological context to date. Our predicted shifts agree well with those obtained experimentally and pave the way for future work in this area.     

Improving splitless injection with electronic pressure programming

An experimental injection port has been designed for split or splitless sample introduction in capillary gas chromatography; the inlet uses electronic pressure control, in order that the column head pressure may be set from the GC keyboard, and the inlet may be used in the constant flow or constant pressure modes. Alternatively, the column head pressure may be programmed up or down during a GC run in a manner analogous to even temperature programming. Using electronic pressure control, a method was developed which used high column head pressures (high column flow rates) at the time of injection, followed by rapid reduction of the pressure to that required for optimum GC separation. In this way, high flow rates could be used at the time of splitless injection to reduce sample discrimination, while lower flow rates could be used for the separation. Using this method, up to 5 μl of a test sample could be injected in the splitless mode with no discrimination; in another experiment, 2.3 times as much sample was introduced into the column by using electronic pressure programming. Some GC peak broadening was observed in the first experiment.     

Pseudopotential calculations on Rb+2, Cs+2, RbH+, CsH+ and the mixed alkali dimer ions

Semi-empirical pseudopotentials are used in calculating the ground-state potentials curves for single valence-electron molecular ions. Very accurate results are obtained and a number of predictions given. The ionization energies of the neutral dimers are evaluated. A spectroscopic rule enables us to estimate the A ¹Σ⁺ state of KRb and RbCs.     

Calculation of hydrophobic interactions from molecular dynamics,surface areas,and experimental hydrocarbon solubilities

Using experimental solubilities and partial pressures for hydrocarbon solution in water and molecular dynamics calculations of hydrocarbon water interaction energies, hydrocarbon–water cavity potentials are obtained and then plotted vs. accessible surface area. The data used is mainly for aliphatic hydrocarbons, but benzene is included. Molecular dynamics calculations of pairs of hydrocarbon molecules together with the cavity potential curve are then used to obtain hydrophobic interaction free energies between the hydrocarbon pairs. While the cavity potential change is related to a change in surface area for hydrocarbon systems, the hydrocarbon–water interaction energy is not, so that the hydrophobic binding energy is not. The results are in agreement with previous results by a different method (R.B. Hermann, In Seventh Jerusalem Symposium on Quantum Pharmacology, E. Bergman and B. Pullman, Eds., D. Reidel, Dordrecht, 1974, p. 441) in that there is little or no solvent-induced binding free energy between small hydrocarbon molecules in a dilute aqueous solution. It is proposed that the cavity potential vs. accessible surface area curve obtained here can be used together with OPLS parameters to calculate both hydrocarbon–water solvation free energies and hydrophobic interactions. © 1993 John Wiley & Sons, Inc.     

Electrophoretic isolation of membrane proteins from acrylamide gels

Protocols for the optimal resolution of membrane and watersoluble proteins in SDS-denatured state (Tricine SDS-PAGE and Blue Tricine SDS-PAGE; Laemmli SDS-PAGE and Blue Laemmli SDSPAGE) and in the native state (Blue Native PAGE) are presented. The protocols for protein recovery from these gels include techniques of electroelution and electroblotting optimized to the type of the preceding electrophoresis system. Native and denatured proteins thus are obtainable in near quantitative yield in soluble and in immobilized form. These techniques can optionally be performed in the milligram range, e.g., for the use of immunization and N-terminal protein sequencing, or in the analytical range.     

An interlaboratory capillary zone electrophoresis-UV study of various monoclonal antibodies,instruments, and ε-aminocaproic acid lots

Capillary zone electrophoresis ultraviolet (CZE-UV) has become increasingly popular for the charge heterogeneity determination of mAbs and vaccines. The ε-aminocaproic acid (eACA) CZE-UV method has been used as a rapid platform method. However, in the last years, several issues have been observed, for example, loss in electrophoretic resolution or baseline drifts. Evaluating the role of eACA on the reported issues, various laboratories were requested to provide their routinely used eACA CZE-UV methods, and background electrolyte compositions. Although every laboratory claimed to use the He et al. eACA CZE-UV method, most methods actually deviate from He's. Subsequently, a detailed interlaboratory study was designed wherein two commercially available mAbs (Waters’ Mass Check Standard mAb [pI 7] and NISTmAb [pI 9]) were provided to each laboratory, along with two detailed eACA CZE-UV protocols for a short-end, high-speed, and a long-end, high-resolution method. Ten laboratories participated each using their own instruments, and commodities, showing excellence method performance (relative standard deviations [RSDs] of percent time-corrected main peak areas from 0.2% to 1.9%, and RSDs of migration times from 0.7% to 1.8% [n = 50 per laboratory], analysis times in some cases as short as 2.5 min). This study clarified that eACA is not the main reason for the abovementioned variations.     

Generation of Ethyl Metathiophosphate by Thermal Fragmentation of O-Ethyl N-Substituted Phosphoramidothioates

O-Ethyl N-1-adamantylphosphoramidothioate was synthesized and found to fragment on heating in inert solvents to form the pyrophosphate AdNHP(S)(OEt)OP(S)(OEt)OH. The proposed mechanism involves an elimination of the amine portion with release of ethyl metathiophosphate (EtOP(S)O), as was confirmed in previous work for the comparable structure with oxygen. This transient compound then phosphorylates the starting phosphoramidothioate. O-Ethyl N,N-diethylphosphoramidothioate was also synthesized, and while it gave a similar pyro compound on heating, the reaction mixture was more complex. Both phosphoramidothioates, however, served effectively as thiophosphorylating agents toward alcohols, a silanol, and the silanol groups on the surface of silica gel. Exploratory experiments showed that these phosphoramidothioates also could thiophosphorylate the OH group of a monoester of phosphoric acid, as well as that of phosphinic acids, forming anhydrides with the partial structure