Orientational effects on atomic photoelectric cross sections and their relevance to photoelectron spectra from single crystals

We have examined the dependence of the photoelectric cross section from individual atomic orbitals and from groups of orbitals adapted to crystal symmetries in order to ascertain the relevance of this effect to the photoelectron spectra arising from single crystals.     

Reactions of sodium sulphide—I : With compounds containing hydroxyl groups

Aqueous solutions of sodium sulphide (ca 10%) reagent were reacted at 250° with compounds containing OH groups. This work was part of a programme designed to test the usefulness of the Na₂S solution degradation technique for determining the primary structure of humic acids. The compounds reacted here and the principal products detected (shown in brackets) were: cinnamyl alcohol (benzyl alcohol, benzoic acid, 3-phenylpropan-1-ol, 3-phenylpropionic acid), benzyl alcohol (little reaction), 3-phenylpropan-1-ol (little reaction), 1,2-dihydroxy-1-phenylethane (phenylacetic acid, acetophenone, 1-phenylethanol), catechol and hydroquinone (recovered starting compounds+ polymer products). Sodium hydroxide gave the same products with cinnamyl alcohol, but in different proportions. Possible mechanisms for these reactions are discussed.     

A biosensor for monitoring formaldehyde using a new lipophilic tetrathiafulvalene-tetracyanoquinodimethane salt and a polyurethane membrane

The fabrication and application of an end-column amperometric detection (AD) system with a carbon electrode for capillary-column liquid chromatography (CLC) were described. This new amperometric detector showed good sensitivity and stability in detecting the thiocompounds and other analytes with CLC. In order to obtain the better separation and detection performance for analytes, several operational parameters had been investigated: the working potentials, pH and flow rate. Under the optimum conditions, the method could effectively separate and determine cysteine (Cys), glutathione (GSH), dopamine (DA) and 6-thiopurine (6-TP). Good repeatability for retention time was obtained with a relative standard deviation (R.S.D.) value of 0.5%. The linear range covered over three orders of magnitude and the limits of detection were 8 fmol for cysteine, 20 fmol for glutathione, 8 fmol for dopamine and 20 fmol for 6-thiopurine. This method was successfully applied in determination of urinary sample with characteristics of simplicity, high sensitivity and good repeatability.     

Multi-step polymer-assisted solution-phase (PASP) library synthesis of functionalized diaminobenzamides

A parallel solution-phase library synthesis of functionalized diaminobenzamides is described. The four-step library synthesis is accomplished using polymer-assisted solution-phase (PASP) synthesis techniques. This high-yielding, multi-step sequence utilizes sequestering resins for the removal of reactants, reactant by-products, and employs a resin capture/release strategy as a key library synthesis step. Step one of the sequence relies on the displacement of an activated fluoro-group from the aromatic ring of 1a, b with a variety of primary amines to introduce the first diversity position. Step two is hydrolysis of the benzoate ester to a benzoic acid which is subsequently captured on a polyamine resin, washed, and released to give 4a, b in pure form. Step three utilizes PASP resins to mediate the amide coupling of a benzoic acid with a variety of primary amines to give the aminonitrobenzamides 5a, b and introduces the second diversity position. Step four is the parallel reduction of the aminonitrobenzamides 5a, b to the functionalized diaminobenzamides 6a, b. This library synthesis proceeds with high overall purities which average 80 % over the 4-step sequence.     

Commercially available 5'-DMT phosphoramidites as reagents for the synthesis of vinylphosphonate-linked oligonucleic acids

[reaction: see text]. Commercially available cyanoethyl phosphoramidites derived from T, d(C), d(A), and d(G) were hydrolyzed (1H-tetrazole, MeCN/H2O) to give the corresponding H-phosphonates in excellent yields. Palladium(0)-catalyzed cross-coupling of each of these with the thymidine-derived vinylbromide 2 afforded the corresponding vinylphosphonate-linked dimers TT, d(C)T, d(A)T, and d(G)T in modest to good yields. The TT dimer was further elaborated to give a 5'-DMT-TT-3'-CEP building block, and this was used in the automated synthesis of the TpTTpT tetramer.     

Development and application of a simple routine method for the determination of selenium in serum by octopole reaction system ICPMS

The aim of the study was to develop an inductively coupled plasma mass spectrometry (ICPMS) method for robust and simple routine determination of selenium in serum. Polyatomic interferences on ⁷⁶Se, ⁷⁷Se, and ⁷⁸Se were removed by applying an octopole reaction system ICPMS with the reaction cell pressurized with H₂ gas. We developed a novel simple optimization routine for the H₂ gas flow based on a signal-to-noise ratio (SNR) calculation of the selenium signal measured in a single selenium standard. The optimum H₂ flow was 2.9 mL min^–1. The selenium content in serum was determined after a 50-fold dilution with 0.16 M HNO₃ and quantified by using addition calibration and gallium as an internal standard. The method detection limit was 0.10 g L^–1 for ⁷⁶Se and ⁷⁸Se and 0.13 g L^–1 for ⁷⁷Se. Human serum samples from a case-control study investigating if selenium was associated with risk of colorectal adenoma were analyzed. The average selenium concentration for the control group (n=768) was 137.1 g L^–1 and the range was 73.4–305.5 g L^–1. The within-batch repeatability (a batch is ten samples) estimated from 182 replicate analyses was 6.3% coefficient of variation (CV), whereas the between-batch repeatability was 7.4% CV estimated from 361 replicates between batches. The method accuracy was evaluated by analysis of a human serum certified reference material (Seronorm Serum level II, Sero A/S, Norway). There was a fairly good agreement between the measured average of 145±3 g L^–1 (n=36) and the certified value of 136±9 g L^–1. In addition the method was successfully applied for analysis of zinc serum concentrations without further optimization. For the Seronorm certified reference material a value of 911±75 g L^–1 (n=31) for zinc was obtained, which corresponds well to the certified zinc value of 920±60 g L^–1.     

Collision-Induced dissociations of deprotonated peptides. Dipeptides containing aspartic or glutamic acids

Deprotonated dipeptides, on collisional activation, fragment by the characteristic process NH₂CH(R¹) CONHCH(R²)CO₂^? → NH₂^?C(R¹)CONHCH(R²)CO₂H → ^?NHCH(R²)CO₂H + NH₂C(R¹)?C?O, when R¹ and R² = H or alkyl. However, when one of the constituent amino acids is either aspartic acid or glutamic acid, the standard cleavage becomes minor in comparison with fragmentation through the α-side-chain of Asp or Glu. For example, [Asp-Leu - H]^? and [Leu-Asp - H]^? both fragment principally by loss of water, a fragmentation not normally noted for peptides. In addition, [Leu-Asp - H]^? loses CO₂ and also forms HO₂CCH?CHCO₂^?˙. These fragmentations establish that Asp is the C-terminal amino acid. In contrast, isomeric Glu dipeptides, e.g. [Glu-Ala - H]^? and [Ala-Glu - H]^? undergo similar fragmentation, both competitively losing H₂O and CO₂. Both spectra also contain a product ion at m/z 128, identified as the pyroglutamate anion. Product ion and deuterium-labelling studies have been used in an attempt to elucidate the complex fragmentation mechanisms in these systems.     

Examination of the electrophoretic behavior of liposomes

The electromigration of liposomes is a complex process resulting in many unexpected behaviors that are difficult to address with existing theories. In this study, the electrophoretic behaviors of liposome populations under various conditions were examined through the use of capillary electrophoresis and the results compared to classical electrokinetic, colloid, and spheroid theories. To elucidate the possible effects of applied field strength, bilayer rigidity, and surface charge on these behaviors, the electrophoretic mobilities of liposome populations were monitored while varying the applied potential, ionic strength of the medium, and the surface charge and cholesterol content of the liposomes. On the basis of comparisons made to the theoretical predictions, our results suggest that liposomal deformation and field-induced polarization may occur during electrophoresis and these mechanisms help to describe many of the observed behaviors.     

Benchmark studies of the BCRLM reactive scattering code: Implications for accurate quantum calculations

Summary The Bending Corrected Rotating Linear Model (BCRLM), developed by Hayes and Walker, is a simple approximation to the true multidimensional scattering problem for reactions of the type: A + BC AB + C. While the BCRLM method is simpler than methods designed to obtain accurate three-dimensional quantum scattering results, this turns out to be a major advantage in terms of our benchmarking studies. The computer code used to obtain BCRLM scattering results is written for the most part in standard FORTRAN and has been ported to several scalar, vector, and parallel architecture computers including the IBM 3090-600J, the Cray XMP and YMP, the Ardent Titan, IBM RISC System/6000, Convex C-1 and the MIPS 2000. Benchmark results will be reported for each of these machines with an emphasis on comparing the scalar, vector, and parallel performance for the standard code with minimum modifications. Detailed analysis of the mapping of the BCRLM approach onto both shared and distributed memory parallel architecture machines indicates the importance of introducing several key changes in the basic strategy and algorithms used to calculate scattering results. This analysis of the BCRLM approach provides some insights into optimal strategies for mapping three-dimensional quantum scattering methods, such as the Parker-Pack method, onto shared or distributed memory parallel computers.