Evidence of a new pulse-shortening mechanism in a load-limited MILO

Experimental evidence shows that the electron flow in a load-limited magnetically insulated transmission line oscillator (MILO) is only partially magnetically insulated at the launch point, yet fully insulated along the downstream slow-wave structure (SWS). This results in a microwave pulse duration substantially less than that of the beam. Computer simulations suggest that anode plasma formation is responsible for this pulse shortening and are able to replicate key features of the experimental data     

Infrared negative luminescent devices and higher operating temperature detectors

Infrared LEDs and negative luminescent devices, where less light is emitted than in equilibrium, have been attracting an increasing amount of interest recently. They have a variety of applications, including as a ‘source’ of IR radiation for gas sensing; radiation shielding for, and non-uniformity correction of, high sensitivity staring infrared detectors; and dynamic infrared scene projection. Similarly, infrared (IR) detectors are used in arrays for thermal imaging and, discretely, in applications such as gas sensing. Multi-layer heterostructure epitaxy enables the growth of both types of device using designs in which the electronic processes can be precisely controlled and techniques such as carrier exclusion and extraction can be implemented. This enables detectors to be made which offer good performance at higher than normal operating temperatures, and efficient negative luminescent devices to be made which simulate a range of effective temperatures whilst operating uncooled. In both cases, however, additional performance benefits can be achieved by integrating optical concentrators around the diodes to reduce the volume of semiconductor material, and so minimise the thermally activated generation-recombination processes which compete with radiative mechanisms. The integrated concentrators are in the form of Winston cones, which can be formed using an iterative dry etch process involving methane/hydrogen and oxygen. We present results on negative luminescence in the mid- and long-IR wavebands, from devices made from indium antimonide and mercury cadmium telluride, where the aim is sizes greater than 1 cm×1 cm. We also discuss progress on, and the potential for, operating temperature and/or sensitivity improvement of detectors, where very high-performance imaging is anticipated from systems which require no mechanical cooling.     

Role of ions in a crossed-field diode

The effect of ions in a magnetically insulated crossed-field gap is studied using a single particle orbit model, shear flow model, and particle-in-cell simulation. It is found that, in general, the presence of ions in a crossed-field gap always increases the electrons' excursion toward the anode region, regardless of the location of the ions. Thus, the rate at which the electrons migrate toward the anode, which is a measure of the diode closure rate, is related to the rate at which ions are introduced into the crossed-field gap. This anode migration of electrons is unrelated to crossed-field ambipolar diffusion. The implications of these findings are explored, such as pulse shortening in relativistic magnetrons and bipolar flows in pulsed-power systems.     

"Forbidden" disulfides: their role as redox switches

Seminal studies by Richardson and Thornton defined the constraints imposed by protein structure on disulfide formation and flagged forbidden regions of primary or secondary structure seemingly incapable of forming disulfide bonds between resident cysteine pairs. With respect to secondary structure, disulfide bonds were not found between cysteine pairs: A. on adjacent beta-stands; B. in a single helix or strand; C. on non-adjacent strands of the same beta-sheet. In primary structure, disulfide bonds were not found between cysteine pairs: D. adjacent in the sequence. In the intervening years it has become apparent that all these forbidden regions are indeed occupied by disulfide-bonded cysteines, albeit rather strained ones. It has been observed that sources of strain in a protein structure, such as residues in forbidden regions of the Ramachandran plot and cis-peptide bonds, are found in functionally important regions of the protein and warrant further investigation. Like the Ramachandran plot, the earlier studies by Richardson and Thornton have identified a fundamental truth in protein stereochemistry: "forbidden" disulfides adopt strained conformations, but there is likely a functional reason for this. Emerging evidence supports a role for forbidden disulfides in redox-regulation of proteins.     

Dynamics of flow–soot interaction in wrinkled non-premixed ethylene–air flames

A two-dimensional simulation of a non-premixed ethylene–air flame was conducted by employing a detailed gas-phase reaction mechanism considering polycyclic aromatic hydrocarbons, an aerosol-dynamics-based soot model using a method of moments with interpolative closure, and a grey gas and soot radiation model using the discrete transfer method. Interaction of the sooting flame with a prescribed decaying random velocity field was investigated, with a primary interest in the effects of velocity fluctuations on the flame structure and the associated soot formation process for a fuel-strip configuration and a composition with mature soot growth. The temporally evolving simulation revealed a multi-layered soot formation process within the flame, at a level of detail not properly described by previous studies based on simplified soot models utilizing acetylene or naphthalene precursors for initial soot inception. The overall effect of the flame topology on the soot formation was found to be consistent with previous experimental studies, while a unique behaviour of localised strong oxidation was also noted. The imposed velocity fluctuations led to an increase of the scalar dissipation rate in the sooting zone, causing a net suppression in the soot production rate. Considering the complex structure of the soot formation layer, the effects of the imposed fluctuations vary depending on the individual soot reactions. For the conditions under study, the soot oxidation reaction was identified as the most sensitive to the fluctuations and was mainly responsible for the local suppression of the net soot production.     

Modeling of the water network at protein-RNA interfaces

Water plays an important role in the mediation of biomolecular interactions. Thus, accurate prediction and evaluation of water-mediated interactions is an important element in the computational design of interfaces involving proteins, RNA, and DNA. Here, we use an algorithm (WATGEN) to predict the locations of interfacial water molecules for a data set of 224 protein-RNA interfaces. The accuracy of the prediction is validated against water molecules present in the X-ray structures of 105 of these complexes. The complexity of the water networks is deconvoluted through definition of the characteristics of each water molecule based on its bridging properties between the protein and RNA and on its depth in the interface with respect to the bulk solvent. This approach has the potential for scoring the water network for incorporation into the computational design of protein-RNA complexes.     

Combined investigation of bulk diffusion and surface exchange parameters of silver catalyst coated yttrium-doped BSCF membranes

The combined effect of minor yttrium doping and silver catalyst deposition on the surface kinetics (k(chem)) and bulk diffusion (D(chem)) of BSCF (Ba(0.5)Sr(0.5)Co(0.8)Fe(0.2)O(3-δ)) perovskite membranes was explored using electrical conductivity relaxation (ECR) and validated using oxygen permeation measurements. Yttrium doping of BSCF to form Ba(0.5)Sr(0.5)Co(0.8)Fe(0.175)Y(0.025)O(3-δ) (BSCFY) improved both the surface exchange kinetics and the bulk diffusion by an average of 44% and 177% respectively, supporting improved oxygen permeation measurements. The deposition of a silver catalyst on BSCFY further improved the surface kinetics by 63-450% at intermediate operating temperatures (600-750 °C), and reduced the activation energy from 163 to 90 kJ mol(-1). Interestingly, these improvements did not translate into enhanced oxygen fluxes for the silver coated thicker 0.5 and 1 mm membranes, indicating that the oxygen ion transport was limited by bulk diffusion. However, oxygen permeation measurements on catalyst-coated 0.3 mm-thick membranes yielded improvements of 20-35% in the range 600-900 °C. The silver catalyst was beneficial in overcoming surface kinetic limitations for the thinner 0.3 mm BSCFY membranes, thus suggesting that the critical thickness of BSCFY membranes lies around ～0.4 mm and validating the ECR measurements.     

Monte Carlo simulation of radiative heat transfer and turbulence interactions in methane/air jet flames

A Photon Monte Carlo method combined with a composition PDF method is employed to model radiative heat transfer in combustion applications. Turbulence-radiation interactions (TRIs) can be fully taken into account using the proposed method. Sandia's Flame D and artificial flames derived from it are simulated and good agreement with experimental data is found. The effects of different TRI components are investigated. It is shown that, to predict the radiation field accurately, emission TRI must be taken into account, while, as expected, absorption TRI is negligible in the considered nonsooting methane/air jet flames if the total radiation quantities are concerned, but non-negligible for evaluation of local quantities. The influence of radiation on the turbulent flow field is also discussed.     

A second-order Monte Carlo method for the solution of the Ito stochastic differential equation

A difference approximation that is second-order accurate in the time step his derived for the general Ito stochastic differential equation. The difference equation has the form of a second-order random walk in which the random terms are non-linear combinations of Gaussian random variables. For a wide class of problems, the transition pdf is joint-normal to second order in h; the technique then reduces to a Gaussian random walk, but its application is not limited to problems having a Gaussian solution. A large number of independent sample paths are generated in a Monte Carlo solution algorithm; any statistical function of the solution (e.g., moments or pdf's) can be estimated by ensemble averaging over these paths     

Large-eddy Simulation of Motored Flow in a Two-valve Piston Engine: POD Analysis and Cycle-to-cycle Variations

Large-eddy simulation (LES) has been performed for a single-cylinder, two-valve, four-stroke-cycle piston engine through 70 consecutive motored cycles. Initial comparisons of ensemble-averaged velocity fields have been made between LES and experiment, and proper orthogonal decomposition (POD) has been used to analyze the complex in-cylinder turbulent flows. Convergence of POD modes has been quantified, several POD variants have been explored, and sensitivity of results to analyzing different subsets of engine cycles has been studied. In general, it has been found that conclusions that were drawn earlier from POD analysis of a simplified non-compressing piston-cylinder assembly with a fixed valve carry over to the much more complex flow in this motored four-stroke-cycle engine. For the cases that have been examined, the first POD mode essentially corresponds to the ensemble-averaged mean velocity. The number of engine cycles required to extract converged POD modes increases with mode number, and varies with phase (piston position). There is little change in the lower-order phase-invariant POD modes when as few as 24 phases per cycle (30° between samples) are used, and complex 3-D time-dependent in-cylinder velocity fields through full engine cycles can be reconstructed using a relatively small number of POD modes. Quantification of cycle-to-cycle variations and insight into in-cylinder flow dynamics can be extracted through analysis of phase-invariant POD modes and coefficients.