Synthesis of (±)-cyclic dehypoxanthine futalosine, the biosynthetic intermediate in an alternative biosynthetic pathway for menaquinones

The first synthesis of (±)-cyclic dehypoxanthine futalosine (cyclic DHFL), a biosynthetic intermediate in the futalosine pathway for menaquinones operating in microorganisms, has been achieved. Efficient growth of the Streptomyces coelicolor mutant, which lacks the cyclic DHFL synthetase gene (mqnC gene) was observed in the presence of synthetic (±)-cyclic DHFL.     

Enantioselective resolutions and circular dichroism studies of lanthanide-containing Keggin-type [Ln(PW11O39)2](11-) polyoxometalates

Enantiopure crystals of K(1.3)Na(3.2)H(6.5)[l-Pr(PW(11)O(39))(2)]·8.3l-proline·21.5H(2)O (1), K(1.3)Na(3.2)H(6.5)[d-Pr(PW(11)O(39))(2)]·8.3d-proline·17H(2)O (2), and K(1.3)Na(3.2)H(6.5)[l-Er(PW(11)O(39))(2)]·8.3l-proline·22.5H(2)O (3) were successfully obtained by using l- and d-proline (pro) as chiral auxiliary agents. In these crystals, l- and d-[Ln(PW(11)O(39))(2)](11-) anions are attached by two l- and d-pro molecules, respectively, through a O···N hydrogen-bonding interaction between the square-antiprismatic LnO(8) center and amino-N atoms. The l- and d-[Pr(PW(11)O(39))(2)](11-) anions in aqueous solutions exhibited a couple of mirror-imaged CD spectra due to (3)H(4/2)→(3)P(0,1,2) and (1)D(2) transitions in the stereogenic Pr(3+) center. Chirality inductions by l- and d-pro from a racemic solution of [Er(PW(11)O(39))(2)](11-) was demonstrated by means of CD spectroscopy.     

Five non‐synonymous SNPs in the gene encoding human deoxyribonuclease I‐like 2 implicated in terminal differentiation of keratinocytes reduce or abolish its activity

Several non‐synonymous SNPs in the human deoxyribonuclease I‐like 2 (DNase 1L2) gene responsible for DNA degradation during terminal differentiation of epidermal keratinocytes have been identified. However, only limited population data are available, and furthermore the effect of these SNPs on the DNase 1L2 activity remains unknown. Genotyping of all of the 17 SNPs was performed using the PCR‐RFLP method in three ethnic groups including 14 different populations. A series of amino acid‐substituted DNase 1L2 corresponding to each SNP was expressed, and its activity was measured. All of the six non‐synonymous SNPs exhibited a mono‐allelic distribution, whereas the distribution of some SNPs other than exonic ones was ethnicity‐dependent. Each of the minor alleles in SNPs, p.Ala20Asp, p.Val104Leu, p.Asp197Ala, p.Glu274Lys and p.Asp287Asn, among the non‐synonymous SNPs produced low or no activity‐harbouring DNase 1L2. DNase 1L2 is well conserved, retaining full levels of enzymatic activity, with regard to these exonic SNPs in human populations. It seems plausible to assume that these SNPs affecting the activity may be one of the factors responsible for a genetic pre‐disposition for failure of differentiation‐associated cell death in various keratinocyte lineages, thereby leading to the development of parakeratosis. Our results may have clinical implications in relation to the pathogenesis of parakeratosis.     

Investigation of adsorption behavior and energy transfer of cationic porphyrins on clay surface at low loading levels by picosecond time-resolved fluorescence measurement

Time-resolved fluorescence and steady-state spectroscopic measurements were performed with +4-charged cationic porphyrins adsorbed on an anionic-type clay (Sumecton SA; SSA) surface at a low molecular loading level (10 % vs. cation-exchange capacity of clay) corresponding to an occupied area of ca 50 nm² per molecule. Absorption spectra indicated no interaction between transition moments of the porphyrins on the clay surface. An efficient energy-transfer process from donor to acceptor porphyrin was observed on the clay surface even under low porphyrin loading conditions. The efficiency of energy transfer obtained from the steady-state measurement was 65 %. Real-time behavior of the porphyrins was successfully captured during energy transfer. The rate constant of the energy transfer obtained from time-resolved fluorescence measurements was found to be 5.3 × 10⁸ s^?1. According to the efficiency and the rate constant, it is proposed that the adsorbed porphyrins did not have a uniform and fixed distribution.     

Stereocontrolled total synthesis and biological evaluation of (−)- and (+)-petrosin and its derivatives

Total synthesis of (−)- and (+)-petrosin was accomplished. Stereocontrolled construction of the quinolizidine ring was achieved through a diastereoselective Mannich reaction and an aza-Michael reaction. Head-to-tail dimerization was performed by assembly of the two monomers using Suzuki–Miyaura cross coupling and subsequent ring-closing metathesis to construct the 16-membered ring. Biological evaluation of synthetic (−)- and (+)-petrosin and its derivatives indicated that the bispiperidine structure was necessary for the inhibition of syncytium formation.     

Characterization of Stress-Exposed Granulocyte Colony Stimulating Factor Using ELISA and Hydrogen/Deuterium Exchange Mass Spectrometry

Information on the higher-order structure is important in the development of biopharmaceutical drugs. Recently, hydrogen/deuterium exchange coupled with mass spectrometry (HDX-MS) has been widely used as a tool to evaluate protein conformation, and unique automated systems for HDX-MS are now commercially available. To investigate the potential of this technique for the prediction of the activity of biopharmaceuticals, granulocyte colony stimulating factor (G-CSF), which had been subjected to three different stress types, was analyzed using HDX-MS and through comparison with receptor-binding activity. It was found that HDX-MS, in combination with ion mobility separation, was able to identify conformational changes in G-CSF induced by stress, and a good correlation with the receptor-binding activity was demonstrated, which cannot be completely determined by conventional peptide mapping alone. The direct evaluation of biological activity using bioassay is absolutely imperative in biopharmaceutical development, but HDX-MS can provide the alternative information in a short time on the extent and location of the structural damage caused by stresses. Furthermore, the present study suggests the possibility of this system being a versatile evaluation method for the preservation stability of biopharmaceuticals. Graphical Abstract

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Thermal unfolding of proteins probed by laser spray mass spectrometry

The stability and conformational changes of cytochrome c (cyt c) at different temperatures and pH have been well examined so far by using various analytical methods. We have found that laser spray mass spectrometry enables much faster and more convenient monitoring of those changes of cyt c compared with other methods. The results correlated well with circular dichroism (CD) experiments under relatively acidic conditions, which destabilize the protein. Laser spray mass spectra of cyt c at various pH were obtained at different levels of laser power. Bimodal charge-state distributions of the protein were observed in laser spray mass spectra, indicating the two-state model of structural change; the lower charges correspond to the folded state, the higher charges to the unfolded state. Based on this result, the presumed denaturation curve of the protein was plotted as a function of laser power, and laser power by which 50% of the protein was assumed to be denatured, E50%, as obtained at each pH. We also examined the melting temperatures, Tm, of cyt c at various values of pH by using CD spectroscopy. The correlation coefficient between E50% and Tm for cyt c was 0.999, demonstrating an excellent correlation. Furthermore, laser spray analysis of ubiquitin, which is found to be more thermally stable than cyt c, gave a higher E50% than cyt c. These results indicate that laser spray mass spectrometry can be an extremely convenient method for probing thermal stabilities and dynamic conformational changes of proteins with subtle structural differences caused by slight changes in pH.     

Polymorphic packing and dynamics of biodegradable poly(3-hydroxypropionate)

The packing and dynamics of the beta-, gamma-, and delta-forms of poly(3-hydroxypropionate) (P3HP), which represents the basic skeleton of bacterial poly(3-hydroxyalkanoate)s, were investigated by the variable-temperature FTIR and (13)C solid-state NMR measurements (SNMR). Under cooling, most of IR bands in the 1500-750 cm(-1) region were noted to be distinctively blueshifted and enhanced, which should reflect the increased intermolecular interaction and depend on the chain packing of each crystal form. Furthermore, the temperature-dependent splitting of vibration were found to occur at the CH2 bending and rocking for the gamma-form, and at the CH2 bending and C-O-C stretching for the delta-form, while be absent for the beta-form. All the FTIR results indicate that the gamma-form has a stronger intermolecular interaction than the beta-form, although both adopt the all-trans conformation. The IR evidence measured during heating further reveal that the melting of the tightly packed gamma-form would pass through some mesophase, which lacks the regular packing but hold the long-range order along the chains. The delta-form was also found to be tightly packed, and contain at least and most possibly two chains in one unit cell. The CP/MAS (13)C SNMR spectrum of the delta-form was compared with those of the beta- and gamma-forms, and was well explained by combining the gamma-gauche and gamma-eclipsed effects. With considering possible differences in the magnetic dipole-dipole interaction among three crystal forms, the molecular mobilities of crystalline phases were estimated by the values of (13)C spin-lattice relaxation time to rank as delta < gamma < beta. The diversified mobilities of three polymorphic crystalline phases, which is the key to crystalline-structure dependent biodegradability of P3HP, were discussed with considering the packing and conformation.     

Enantiopure anthrylene-ethynylene cyclic tetramer and racemization via rotation of anthracene unit about acetylenic axes

Four anthracene and four acetylene units are used to construct a chiral pi-conjugate macrocycle, the chirality of which is due to the restricted rotation about acetylenic axes. Enantiomers were readily resolved by chiral HPLC and racemized slowly even at 70 degrees C.