Application of displacement chromatography for the proteome analysis of a human plasma protein fraction

It was the aim of this study to compare the performance of displacement chromatography with gradient elution chromatography both applied as the cation-exchange separation step for a proteome analysis in a bottom-up approach using multidimensional chromatography for the separation of tryptic peptides prior to their mass spectrometric analysis. The tryptic digest of the human Cohn fraction IV-4 served as a sample. For both chromatography modes commonly used operating parameters were chosen thus ensuring optimal separation results of equal sample amounts for each mode. All resulting fractions were analyzed with an HPLC-chip–LC–MS system. The eluate of the HPLC-chip column was ionized by electrospray ionization (ESI) and analyzed with an ion-trap mass spectrometer. For guaranteeing high confidence concerning the identity of the peptides, the mass spectrometric data were processed by different bioinformatic tools applying stringent criteria. By the displacement approach the total amount of identified proteins (78) was significantly higher than in the gradient mode (58). The results showed that displacement chromatography is a well suited alternative in comparison to gradient elution separation for analysis of proteomes via the bottom-up approach applying multidimensional chromatography, especially in those cases when larger quantities of proteins are available.     

Oxygen as a site specific probe of the structure of water and oxide materials

The method of oxygen isotope substitution in neutron diffraction is introduced as a site specific structural probe. It is employed to measure the structure of light versus heavy water, thus circumventing the assumption of isomorphism between H and D as used in more traditional neutron diffraction methods. The intramolecular and intermolecular O-H and O-D pair correlations are in excellent agreement with path integral molecular dynamics simulations, both techniques showing a difference of ?0.5% between the O-H and O-D intramolecular bond distances. The results support the validity of a competing quantum effects model for water in which its structural and dynamical properties are governed by an offset between intramolecular and intermolecular quantum contributions.     

Adaption of a diffractometer for time‐resolved X‐ray resonant magnetic scattering

A new set‐up is presented to measure element‐selective magnetization dynamics using the ALICE chamber [Grabis et al. (2003), Rev. Sci. Instrum. 74 , 4048–4051] at the BESSY II synchrotron at the Helmholtz‐Zentrum Berlin. A magnetic‐field pulse serves as excitation, and the magnetization precession is probed by element‐selective X‐ray resonant magnetic scattering. With the use of single‐bunch‐generated X‐rays a temporal resolution well below 100 ps is reached. The ALICE diffractometer environment enables investigations of thin films, described here, multilayers and laterally structured samples in reflection or diffuse scattering geometry. The combination of the time‐resolved set‐up with a cryostat in the ALICE chamber will allow temperature‐dependent studies of precessional magnetization dynamics and of damping constants to be conducted over a large temperature range and for a large variety of systems in reflection geometry.     

Bending insensitivity of fiber Bragg gratings in suspended-core optical fibers

This Letter presents simulation and experimental results that explore bending insensitivity of fiber Bragg gratings in suspended-core optical fibers. The implementation of thin silica bridge in the fibers enhances index contrast of the fiber core and reduces bending-induced strain transfer to the fiber core. This fiber design lead to a reduction of over 7 times in strain-induced fiber Bragg grating resonant peak shifts in the suspended-core fiber compared with that in standard telecommunication fiber, and an 0.14 dB bending loss at a bending radius of 6.35 mm.     

Synthesis of new amphiphilic and lypophilic polymer networks containing 2‐methyl‐ and 2‐nonyl‐2‐oxazoline by the macroinitiator method

New amphiphilic and lypophilic polymer networks were obtained by the copolymerization of 2‐methyl‐2‐oxazoline (MeOXA), and/or 2‐nonyl‐2‐oxazoline (NoOXA) and 2,2′‐tetramethylenebis(2‐oxazoline) (BisOXA), respectively, initiating the copolymerization by random copolymers of chloromethylstyrene and methyl methacrylate or of chloromethylstyrene and styrene (macroinitiator method). Potassium iodide was used as an activator agent and the reaction was carried out in benzonitrile at 110 °C. In general, the polymer gels were obtained with a yield of 62 to 88%. The networks were characterized by high‐resolution magic angle spinning (HRMAS) NMR spectroscopy and by its absorption of polar and nonpolar solvents. In the case of amphiphilic polymer networks, the absorption of solvents depends on the molar ratio of 2‐methyl‐ to 2‐nonyl‐2‐oxazoline inside the polymer network favoring the absorption of polar solvents with a higher content of 2‐methyl‐2‐oxazoline. These gels showed a maximal swelling degree of 13 mL of water, 20 mL of methanol, and 13 mL of chloroform, respectively, per g of polymer. The lypophilic polymer networks containing only 2‐nonyl‐2‐oxazoline showed a maximal swelling degree of 8 mL of toluene, 14 mL of chloroform, and 2 mL of methanol, respectively, per g of the lypophilic network. © 2004 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 43: 122–128, 2005