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21.
Siering C Grimme S Waldvogel SR 《Chemistry (Weinheim an der Bergstrasse, Germany)》2005,11(6):1877-1888
The first direct assignment of highly dynamic enantiofacial discrimination acting on a single heterocyclic substrate has been achieved by a combination of experimental and theoretical CD spectroscopy. The interaction of chirally modified hosts based on triphenylene ketals with appropriate prochiral guests can lead to the preferential formation of one diastereomeric host-guest complex. This reversible stereoselective binding transmits the chiral information from remote chiral groups in the host to the strongly absorbing triphenylene chromophore, which gives rise to self-induced CD. This effect was exploited for the determination of the enantiofacial recognition in various host-guest systems. Inversion of the steric demand either of the chiral substituents at the host or of the prochiral guest leads to almost complete inversion of the resulting CD spectra. For the assignment of the absolute stereochemistry of the complexes, a combined molecular dynamics/quantum-chemical approach was successfully employed. Despite the size and the highly dynamic character of the supramolecular systems, fundamental properties of the systems and details of the spectra were simulated accurately, providing access to fast and reliable assignment of the enantiofacial preference. The results are highly consistent with available X-ray data. 相似文献
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The nonsymmetric Lanczos method has recently received significant attention as a model reduction technique for large-scale systems. Unfortunately, the Lanczos method may produce an unstable partial realization for a given, stable system. To remedy this situation, unexpensive implicit restarts are developed which can be employed to stabilize the Lanczos generated model.This work was supported in part by ARPA (US Army ORA4466.01), by ARPA (Grant 60NANB2D1272), by the Department of Energy (Contract DE-FG0f-91ER25103) and by the National Science Foundation (Grants CCR-9209349 and CCR-9120008). 相似文献
24.
A newly developed interface coupling a CHN combustion device (elemental analyser 'EA') to an isotope ratio mass spectrometer is described and evaluated. The purpose of the device is to extend the dynamic range of delta(13)C and delta(15)N analysis from less than 2 orders of magnitude to more than 3 orders of magnitude. Carbon isotope ratio measurements of atropine as a model compound have been performed analysing between 1 μg to 5 mg C with acceptable to excellent precision (0.6 to 0.06 per thousand, delta-notation). The correction due to the blank signal is critical for sample amounts smaller than 4 μg C. The maximum sample weight is determined by the combustion capacity of the EA. Larger sample amounts are measured using dilution of a small part of the EA effluent with helium. The dilution mechanism works virtually free of isotope fractionation. Copyright 1999 John Wiley & Sons, Ltd. 相似文献
25.
Dr. Zheng-Wang Qu Dr. Hui Zhu Dr. Nataliya A. Zhukova Prof. Sergey A. Katsyuba Prof. Vakhid A. Mamedov Prof. Stefan Grimme 《ChemCatChem》2021,13(6):1503-1508
Benzimidazoles and benzimidazolones can be efficiently synthesized via acid-catalyzed rearrangements of 3-aroylquinoxalin-2-ones with various nucleophiles. The detailed mechanisms of typical rearrangements of 3-benzoylquinoxalin-2-one ( 1 Q ) with 1,2-benzendiamine ( 1 a , Type I) and with methyl 3-aminocrotonate ( 1 b , Type II) in acetic acid solution are explored by extensive DFT calculations. Acetic acid acts as proton source and efficient proton shuttle during the catalysis. The former rearrangement is initiated by site-selective N⋅⋅⋅C condensation at protonated benzoyl site of 1 Q , while the latter is initiated by two competing C⋅⋅⋅C nucleophilic additions at protonated imine and benzoyl sites of 1 Q that eventually leads to two isomeric products. Both rearrangements proceed via intramolecular SN(ANRORC) mechanism (sequential Addition of Nucleophile, Ring-Opening and Ring-Closing) involving spiro-quinoxalinone intermediates, but with fundamentally different RORC steps via ring-opening anilide cation and isocyanate cation species, respectively. A simple energetic rule is suggested to determine the type of rearrangement by counting the conjugated π-electrons within the spiro-forming ring that may stabilize the ring-opening anilide cation species, which may enable further rational design of novel spiro-quinoxalinone based rearrangements. 相似文献
26.
Tristan J. Keller Christopher Sterzenbach Joshua Bahr Taria L. Schneiders Markus Bursch Julia Kohn Theresa Eder John M. Lupton Stefan Grimme Sigurd Hger Stefan-S. Jester 《Chemical science》2021,12(27):9352
Molecular spoked wheels with D3h and Cs symmetry are synthesized by Vollhardt trimerization of C2v-symmetric dumbbell structures with central acetylene units and subsequent intramolecular ring closure. Scanning tunneling microscopy of the D3h-symmetric species at the solid/liquid interface on graphite reveals triporous chiral honeycomb nanopatterns in which the alkoxy side chains dominate the packing over the carboxylic acid groups, which remain unpaired. In contrast, Cs-symmetric isomers partially allow for pairing of the carboxylic acids, which therefore act as a probe for the reduced alkoxy chain nanopattern stabilization. This observation also reflects the adsorbate substrate symmetry mismatch, which leads to an increase of nanopattern complexity and unexpected templating of alkoxy side chains along the graphite armchair directions. State-of-the-art GFN-FF calculations confirm the overall structure of this packing and attribute the unusual side-chain orientation to a steric constraint in a confined environment. These calculations go far beyond conventional simple space-filling models and are therefore particularly suitable for this special case of molecular packing.Scanning tunneling microscopy investigations of phenylene-based molecular spoked wheels with D3h and Cs symmetries on graphite show the competitive or complementary effects of carboxylic acid groups and alkoxy chains on the nanopattern formation. 相似文献
27.
Prof. Dr. Tunga Salthammer Friederike Monegel Nicole Schulz Dr. Erik Uhde Prof. Dr. Stefan Grimme Jakob Seibert Prof. Dr. Uwe Hohm Dr. Wolf-Ulrich Palm 《Chemistry (Weinheim an der Bergstrasse, Germany)》2021,27(3):1046-1056
The chemical background of olfactory perception has been subject of intensive research, but no available model can fully explain the sense of smell. There are also inconsistent results on the role of the isotopology of molecules. In experiments with human subjects it was found that the isotope effect is weak with acetone and D6-acetone. In contrast, clear differences were observed in the perception of octanoic acid and D15-octanoic acid. Furthermore, a trained sniffer dog was initially able to distinguish between these isotopologues of octanoic acid. In chromatographic measurements, the respective deuterated molecule showed weaker interaction with a non-polar liquid phase. Quantum chemical calculations give evidence that deuterated octanoic acid binds more strongly to a model receptor than non-deuterated. In contrast, the binding of the non-deuterated molecule is stronger with acetone. The isotope effect is calculated in the framework of statistical mechanics. It results from a complicated interplay between various thermostatistical contributions to the non-covalent free binding energies and it turns out to be very molecule-specific. The vibrational terms including non-classical zero-point energies play about the same role as rotational/translational contributions and are larger than bond length effects for the differential isotope perception of odor for which general rules cannot be derived. 相似文献
28.
Markus Bursch Lukas Kunze Dr. Amol M. Vibhute Dr. Andreas Hansen Prof. Dr. Kana M. Sureshan Dr. Peter G. Jones Prof. Dr. Stefan Grimme Prof. Dr. Daniel B. Werz 《Chemistry (Weinheim an der Bergstrasse, Germany)》2021,27(14):4627-4639
The noncovalent interactions between azides and oxygen-containing moieties are investigated through a computational study based on experimental findings. The targeted synthesis of organic compounds with close intramolecular azide–oxygen contacts yielded six new representatives, for which X-ray structures were determined. Two of those compounds were investigated with respect to their potential conformations in the gas phase and a possible significantly shorter azide–oxygen contact. Furthermore, a set of 44 high-quality, gas-phase computational model systems with intermolecular azide–pnictogen (N, P, As, Sb), –chalcogen (O, S, Se, Te), and –halogen (F, Cl, Br, I) contacts are compiled and investigated through semiempirical quantum mechanical methods, density functional approximations, and wave function theory. A local energy decomposition (LED) analysis is applied to study the nature of the noncovalent interaction. The special role of electrostatic and London dispersion interactions is discussed in detail. London dispersion is identified as a dominant factor of the azide–donor interaction with mean London dispersion energy-interaction energy ratios of 1.3. Electrostatic contributions enhance the azide–donor coordination motif. The association energies range from −1.00 to −5.5 kcal mol−1. 相似文献
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30.
Grimme S 《Journal of computational chemistry》2003,24(13):1529-1537
Based on a partitioning of the total correlation energy into contributions from parallel‐ and antiparallel‐spin pairs of electrons, a modified third‐order Møller–Plesset (MP) perturbation theory is developed. The method, termed SCS–MP3 (SCS for spin‐component‐scaled) continues previous work on an improved version of MP2 (S. Grimme, J Chem Phys 2003, 118, 9095). A benchmark set of 32 isogyric reaction energies, 11 atomization energies, and 11 stretched geometries is used to assess to performance of the model in comparison to the standard quantum chemical approaches MP2, MP3, and QCISD(T). It is found, that the new method performs significantly better than usual MP2/MP3 and even outperforms the more costly QCISD method. Opposite to the usual MP series, the SCS third‐order correction uniformly improves the results. Dramatic enhancements are especially observed for the more difficult atomization energies, some of the stretched geometries, and reaction and ionization energies involving transition metal compounds where the method seems to be competitive or even superior to the widely used density functional approaches. Further tests performed for other complex systems (biradicals, C20 isomers, transition states) demonstrate that the SCS–MP3 model yields often results of QCISD(T) accuracy. The uniformity with which the new approach improves for very different correlation problems indicates significant robustness, and suggests it as a valuable quantum chemical method of general use. © 2003 Wiley Periodicals, Inc. J Comput Chem 24: 1529–1537, 2003 相似文献