CHLOROPHYLL PHOTOSENSITIZED ELECTRON TRANSFER REACTIONS IN LIPID BILAYER VESICLES: VECTORIAL ELECTRON TRANSFER ACROSS THE BILAYER FROM REDUCED CYTOCHROME c IN THE INNER COMPARTMENT TO OXIDIZED FERREDOXIN IN THE OUTER COMPARTMENT

A negatively charged large unilamellar vesicle system containing a membrane-bound photo-sensitizer (chlorophyll, Chi), a reduced redox protein [cytochrome c, cyt c(red)] in the inner aqueous compartment, an oxidized redox protein [ferredoxin, Fd(ox)] in the outer aqueous compartment, and propylene diquat (PDQ²⁺) as a mediator, was investigated using both flash and steady-state photolysis techniques. The results demonstrate that the light-generated triplet state of Chi (³Chl) was initially quenched by PDQ²⁺ at the outer membrane surface to form Chi cation radical (Chl⁺) and the reduced diquat (PDQ⁺). This was succeeded by a biphasic recombination between Chi⁺ and PDQ⁺. The slow phase of the recombination process, which represents reverse electron transfer between Chl⁺ and those PDQ⁺ molecules which escaped from the membrane surface, could be suppressed effectively both by the reduction of Chl^ in the inner monolayer of the vesicles by cyt c(red), and by the reoxidation of PDQ⁺ by Fd(ox) in the outer aqueous compartment. These reactions lead to the permanent accumulation of oxidized and reduced product proteins, i.e. cyt c(ox) in the inner compartment and Fd(red) in the outer compartment. The yields of such accumulation were 11%, based on the ³Chl quenched, and 1.4%, based on absorbed quanta, under the conditions used in the present study. This system mimics one of the key events in natural photosynthesis and results in an appreciable storage of electromagnetic energy in the reaction products.     

Activity coefficient measurements of the system HCl−ZnCl2−H2O at 25 and 35°C

Electromotive force measurements were carried out on the HCl–ZnCl₂–H₂O system at constant total ionic strengths of 0.1, 0.2, 0.5, 1.0 and 2.0 mol-kg^–1 at 25 and 35°C using a cell consisting of Pt, H₂(g, 1 atm)|HCl(m_A), ZnCl₂(m_B)|AgCl/Ag. The data were interpreted by the mixed electrolyte equations of Pitzer and Kim in order to evaluate mixing ion-interaction parameters. The activity coefficients of ZnCl₂ and the Gibbs excess free energies of mixing are calculated and presented at I=2.0 mol-kg^–1 and compared with similar systems containing transition metal chlorides.     

Closed loop coherent control of electronic transitions in gallium arsenide

A genetic algorithm was used to control the photoluminesce-nce (PL) from GaAs(100). A spatial light modulator (SLM) used feedback from the emission to optimize the spectral phase profile of an ultrashort laser pulse. Most of the experiments were performed using a sine phase function to optimize the integrated PL spectrum over a specified wavelength range, with the amplitude and period of the phase function treated as genetic parameters. An order of magnitude increase in signal was achieved after only one generation, and an optimized waveform, consisting of three equally spaced pulses approximately 0.8 ps apart, was obtained after 15 generations. The effects of fluence, polarization, relative phase of the subpulses, and spectral range of the optimized PL were investigated. In addition, preliminary experiments were performed using the phases of individual pixels of the SLM as genetic variables. The PL spectrum is identified with recombination of electron-hole pairs in the L-valley of the Brillouin zone. Control is achieved by coherent manipulation of plasma electrons. It is proposed that hot electrons excite lattice phonons, which in turn scatter carriers into the L-valley.     

Protein phosphatase 2a (PP2A) binds within the oligomerization domain of striatin and regulates the phosphorylation and activation of the mammalian Ste20-Like kinase Mst3

Background

The repertoire of the antigen-binding receptors originates from the rearrangement of immunoglobulin and T-cell receptor genetic loci in a process known as V(D)J recombination. The initial site-specific DNA cleavage steps of this process are catalyzed by the lymphoid specific proteins RAG1 and RAG2. The majority of studies on RAG1 and RAG2 have focused on the minimal, core regions required for catalytic activity. Though not absolutely required, non-core regions of RAG1 and RAG2 have been shown to influence the efficiency and fidelity of the recombination reaction.

Results

Using a partial proteolysis approach in combination with bioinformatics analyses, we identified the domain boundaries of a structural domain that is present in the 380-residue N-terminal non-core region of RAG1. We term this domain the Central Non-core Domain (CND; residues 87-217).

Conclusions

We show how the CND alone, and in combination with other regions of non-core RAG1, functions in nuclear localization, zinc coordination, and interactions with nucleic acid. Together, these results demonstrate the multiple roles that the non-core region can play in the function of the full length protein.     

Binuclear cobalt(II/II) and cobalt(II/III) chelates with O<Subscript>2</Subscript>N<Subscript>2</Subscript> ligands: synthesis,structure and magnetic studies

Abstract  The title complexes and have been synthesized in excellent yields by reacting Co(OAc)₂·4H₂O with H₂L¹ and H₂L², respectively, in acetonitrile solution. Here, [L¹]²⁻ and [L²]²⁻ are the deprotonated forms of N,N-bis(2-hydroxybenzyl)-N′,N′-dimethylethylenediamine and N,N-bis(2-hydroxybenzyl)-2-picolylamine, respectively. The crystal structures of and were determined by x-ray crystallography. In , each cobalt atom has distorted trigonal bipyramid geometry, while in , each cobalt atom has distorted octahedral geometry. Variable temperature magnetic moment measurements show weak antiferromagnetic interaction in . The magnetic characterization for is in agreement with the presence of Co(II) and Co(III) centers. Graphical Abstract  The title complexes and have been synthesized in excellent yields by reacting Co(OAc)₂·4H₂O with dianionic N₂O₂ coordinating ligands. In complex 1, each cobalt atom has distorted trigonal bipyramid geometry, while in complex 2, each cobalt atom has distorted octahedral geometry. Variable temperature magnetic moment measurements show weak antiferromagnetic interaction in complex 1. The magnetic characterization for complex 2 is in agreement with the presence of Co(II) and Co(III) centers. Electronic supplementary material  The online version of this article (doi:) contains supplementary material, which is available to authorized users.     

Chemical pressure and rare-earth orbital contributions in mixed rare-earth silicides La(5-x)Y(x)Si4 (0 ≤ x ≤ 5)

A crystallographic study and theoretical analysis of the structural and La/Y site preferences in the La(5-x)Y(x)Si(4) (0 ≤ x ≤ 5) series prepared by high-temperature methods is presented. At room temperature, La-rich La(5-x)Y(x)Si(4) phases with x ≤ 3.0 exhibit the tetragonal Zr(5)Si(4)-type structure (space group P4(1)2(1)2, Z = 4, Pearson symbol tP36), which contains only Si-Si dimers. On the other hand, Y-rich phases with x = 4.0 and 4.5 adopt the orthorhombic Gd(5)Si(4)-type structure (space group Pnma, Z = 4, Pearson symbol oP36), also with Si-Si dimers, whereas Y(5)Si(4) forms the monoclinic Gd(5)Si(2)Ge(2) structure (space group P2(1)/c, Z = 4, Pearson symbol mP36), which exhibits 50% "broken" Si-Si dimers. Local and long-range structural relationships among the tetragonal, orthorhombic, and monoclinic structures are discussed. Refinements from single crystal X-ray diffraction studies of the three independent sites for La or Y atoms in the asymmetric unit reveal partial mixing of these elements, with clearly different preferences for these two elements. First-principles electronic structure calculations, used to investigate the La/Y site preferences and structural trends in the La(5-x)Y(x)Si(4) series, indicate that long- and short-range structural features are controlled largely by atomic sizes. La 5d and Y 4d orbitals, however, generate distinct, yet subtle effects on the electronic density of states curves, and influence characteristics of Si-Si bonding in these phases.     

Dissociative electron attachment to CH2Cl2, CHCH3Cl2, and C(CH3)2Cl2

We perform theoretical studies of dissociative electron attachment (DEA) for the compounds CH(2-n)(CH(3))(n)Cl(2), n = 0, 1, 2, by combining the finite-element discrete model with the resonance R-matrix theory. An unexpectedly low DEA cross section for CH(2)Cl(2) is likely due to the relatively large resonance width for this compound that confirms experimental observations. However, there are some quantitative discrepancies with the experimental results. Since DEA cross sections are very sensitive to the resonance width, a slight adjustment of its value can significantly improve agreement between theory and experiment. Our calculation of the thermal rate coefficients show that there are some inconsistencies between beam and swarm measurements and between different swarm measurements of the rate coefficients for DEA to CH(2)Cl(2). Further experimental and theoretical studies are warranted.     

Three methods for calculation of the hyper-Wiener index of molecular graphs

The hyper-Wiener index WW of a graph G is defined as WW(G) = (summation operator d (u, v)(2) + summation operator d (u, v))/2, where d (u, v) denotes the distance between the vertices u and v in the graph G and the summations run over all (unordered) pairs of vertices of G. We consider three different methods for calculating the hyper-Wiener index of molecular graphs: the cut method, the method of Hosoya polynomials, and the interpolation method. Along the way we obtain new closed-form expressions for the WW of linear phenylenes, cyclic phenylenes, poly(azulenes), and several families of periodic hexagonal chains. We also verify some previously known (but not mathematically proved) formulas.     

Spin-state alteration from sterically enforced ligand rotation in bis(indenyl)chromium(II) complexes

The rotational orientation of cyclopentadienyl rings usually has no effect on d-orbital energy levels and splitting in transition metal complexes. With related but less symmetrical carbocyclic ligands, however, the magnetic properties of the associated complexes can be altered by the alignment of the ligands. Examples of this effect are found in substituted organochromium(II) bis(indenyl) complexes. The monosubstituted compounds (1-RC(9)H(6))(2)Cr (R = t-Bu, SiMe(3)) are prepared from the substituted lithium indenides and CrCl(2) in THF; they are high-spin species with four unpaired electrons. Their spin state likely reflects that in the unknown monomeric (C(9)H(7))(2)Cr, which is calculated to have a high-spin (S = 2) ground state in the staggered configuration (180 degrees rotation angle). However, the analogous bis(indenyl) complexes containing t-Bu or SiMe(3) groups in both the 1 and 3 positions on the indenyl ligands ((1,3-R(2)C(9)H(5))(2)Cr) are low-spin compounds with two unpaired electrons. X-ray diffraction results indicate that [1-(t-Bu)C(9)H(6)](2)Cr exists in a staggered conformation, with Cr-C (av) = 2.32(4) A. In contrast, the average Cr-C distances in [1,3-(t-Bu or SiMe(3))(2)C(9)H(5)](2)Cr are 2.22(2) and 2.20(2) A, respectively, and the rings are in a gauche configuration, with rotation angles of 87 degrees. The indenyl conformations are sterically imposed by the bulk of the t-Bu and SiMe(3) substituents. The change from a staggered to a gauche indenyl orientation lowers the symmetry of a (C(9)H(7))(2)M complex and allows greater mixing of metal and ligand orbitals. Calculations indicate that previously nonbonding pi orbitals of the indenyl anion are able to interact with the chromium d orbitals, producing bonding and antibonding combinations. The latter remain unpopulated, and the resulting increase in the HOMO-LUMO gap forces the complexes to adopt a low-spin configuration. The possibility of using sterically imposed ligand rotation as a means of spin-state manipulation makes indenyl compounds a potentially rich source of magnetically adjustable molecules.