Current development of analytical affinity chromatography: Design and biotechnological uses of molecular recognition surfaces

Analytical high performance liquid affinity chromatography (analytical HPLAC) has been investigated as an experimental guide to both synthetic design and affinity technological use of peptide and protein recognition surfaces. This work has progressed from the ongoing use of analytical affinity chromatography to study interaction mechanisms of naturally-occurring peptides and proteins, including enzyme fragment complexes and neuroendocrine biosynthetic precursors. We recently initiated a study to use analytical HPLAC for de novo design of recognition peptides called “anti-sense peptides”. Present data suggest the potential to use anti-sense peptides as “synthetic antibodies”, in immobilized forms, for biomolecular separation and analysis. Analogous studies have been started with immobilized natural antibodies in analytical immuno HPLAC. Our present data typify the growing usefulness of analytical HPLAC when designing recognition molecules, analyzing their interaction characteristics, and devising ways to use them in affinity technology.     

Asymmetric Catalytic Aziridination of Cyclic Enones

The first catalytic method for the asymmetric aziridination of cyclic enones is described. The presented organocatalytic strategy is based on the use of an easily available organocatalyst that is able to convert a wide range of cyclic enones into the desired aziridines with very high enantiomeric purity and good chemical yield. Such a method may very well open up new opportunities to stereoselectively prepare complex chiral molecules that possess an indane moiety, a framework that is found in a large number of bioactive and pharmaceutically important molecules     

The euclidean distance degree of orthogonally invariant matrix varieties

The Euclidean distance degree of a real variety is an important invariant arising in distance minimization problems. We show that the Euclidean distance degree of an orthogonally invariant matrix variety equals the Euclidean distance degree of its restriction to diagonal matrices. We illustrate how this result can greatly simplify calculations in concrete circumstances.     

Interface Energy in the Edwards-Anderson Model

We numerically investigate the spin glass energy interface problem in three dimensions. We analyze the energy cost of changing the overlap from −1 to +1 at one boundary of two coupled systems (in the other boundary the overlap is kept fixed to +1). We implement a parallel tempering algorithm that simulates finite temperature systems and works with both cubic lattices and parallelepiped with fixed aspect ratio. We find results consistent with a lower critical dimension D _c =2.5. The results show a good agreement with the mean field theory predictions.     

Quantitative analysis of two-dimensional gel-separated proteins using isotopically marked alkylating agents and matrix-assisted laser desorption/ionization mass spectrometry

We describe a simple approach for the relative quantification of individual proteins within a mixture. The method is based on the differential labelling of the mixtures by use of a commercially available acrylamide and deuterium-labelled [2,3,3'-d(3)]-acrylamide to alkylate proteins prior to two-dimensional (2-D) gel electrophoresis. The tryptic digests of the separated proteins were subjected to reflector matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF) analysis and the relative peak heights of cysteine-containing peptides were used to quantify their precursor proteins. This approach was tested for the relative quantification of proteins within an artificial mixture of standard proteins and for proteins observed in a 2-D map of rat serum. A good correlation was found between the measured ratios derived from MALDI-TOF data and those theoretically calculated prior to 2-D analysis via known mixing ratios of the two alkylating reagents. The described procedure has proved to be effective for comparative measurements of protein abundances within the investigated mixtures.     

X-ray structures and anionotropic rearrangements of Di-tert-butyl-substituted thiiranium and thiirenium ions. A structure-reactivity relationship

The X-ray structures of c-2,t-3-di-tert-butyl-r-1-methylthiiranium 8 BF(4)(-), t-2,t-3-di-tert-butyl-r-1-methylthiiranium ion 10 BF(4)(-), and 2,3-di-tert-butyl-1-methylthiirenium 11 BF(4)(-) have been determined. The DeltaG()(298) values for the rearrangements from the cis and the trans tert-butyl groups of 8 SbCl(6)(-) to thietanium ion (two intramolecular S(N)2 displacements) and for the rearrangement of 11 SbCl(6)(-) to thietium ion (an intramolecular S(N)2-Vin displacement) are linearly correlated with the strengths of the C-S breaking bonds, suggesting that the two mechanisms are, in the absence of steric hindrance, uniquely governed by the nucleofugality of the sulfonium leaving group.     

Initial operation at liquid-helium temperature of the M =2270 kg Al 5056 gravitational-wave antenna of the Rome group

Summary We report on the cooling at liquid-helium temperature of our 2270 kg 5056 Al bar at CERN. The liquid-helium container had been filled up to 1500 liters ensuring to keep the antenna cold for more than one month. The antenna is equipped with a resonant capacitive transducer operating at constant electrical charge with a FET low-noise amplifier. The transducer is tuned to the antenna within less than I Hz and the two normal-mode frequencies are ν₋=908.160 Hz and ν₊=924.234 Hz with an applied electrical field in the transducer of 10⁶ V/m. The corresponding overall merit factors areQ ₋=5.20·10⁶ andQ ₊=7.25·10⁶. The transducer has been tested up to an electrical field of 6·10⁶ V/m: in this condition we have βQ≈10⁴. The antenna has been in operation for several weeks giving, for the Brownian noise, values in agreement with the calculated values. We report also on the results of tests performed on a DC SQUID, whose input was connected to a commercial capacitor via a transformer with turn ratio of 1000. Supported in part by Japan Society for the Promotion of Science.