Quality management of preanalytical phase: impact of lithium heparin vacuum tubes changes on clinical chemistry tests

The validation process is essential in accredited laboratory medicine, but is rarely regarded as an issue in the preanalytical management. The aim of this study was to validate five kinds of lithium heparin vacuum tubes for routine clinical chemistry laboratory testing. Blood specimens from 100 volunteers in five different plasma vacuum tubes (Tube I: VACUETTE^®, Tube II: LABOR IMPORT^®, Tube III: S-Monovette^®, Tube IV: PST^® and Tube V: PST II^®) were collected by a single expert phlebotomist. The routine clinical chemistry tests were performed on a Cobas^® 6000 <c501> module. The significance of the differences between samples was statistically assessed at p < 0.005. The biases from the different tubes were compared with the current desirable quality specifications. Basically, significant differences could be confirmed by RM ANOVA for the results of the clinical chemistry tests on the following components: glucose, urea, creatinine, alkaline phosphatase, amylase, aspartate aminotransferase, alanine aminotransferase, lactate dehydrogenase, total bilirubin, phosphate, Ca, Mg, Fe and K. Clinically significant variations as compared with the current desirable quality specifications were found for glucose, creatinine, amylase, aspartate aminotransferase, alanine aminotransferase, lactate dehydrogenase, Ca, Mg and K. In conclusion, our results do not support arbitrary interchange among brands of plasma vacuum tubes. Future investigations are needed to understand the reasons of these observations; in the meantime, we suggest that laboratory managers standardize the procedures and frequently evaluate the quality of in vitro diagnostic devices.     

Optimization of headspace solid-phase microextraction for analysis of β-caryophyllene in a nanoemulsion dosage form prepared with copaiba (Copaifera multijuga Hayne) oil

Recent studies have shown the anti-inflammatory activity of Copaiba oils may be addressed to the high content of β-caryophyllene, the most common sesquiterpene detected, especially in the Copaifera multijuga Hayne species. In the present study, nanoemulsions were proposed as a delivery system for copaiba oil in view to treat locally inflamed skin. This article describes the optimization and validation of a stability-indicating SPME-GC method, for β-caryophyllene analysis in the nanoemulsions produced by high pressure homogenization. SPME methods are performed with PDMS (polydimethylsiloxane) fiber (100 μm). Three SPME parameters were evaluated by a three-level-three-factor Box–Behnken factorial design as potentially affecting the technique efficiency. According to the results obtained, the best conditions to extract β-caryophyllene were: (i) sampling temperature of 45 °C, (ii) sampling time of 20 min and (iii) no NaCl addition. Results coming from the forced degradation tests showed a reduction of β-caryophyllene peak area when both caryophyllene methanolic solution and nanoemulsions were exposed to acid hydrolysis, UV-A irradiation, oxidative (H₂O₂) and thermolitic (60 °C) conditions. Such reduction occurred in lower extent in the nanoemulsions, suggesting a protective effect of the formulation to β-caryophyllene content. Since no degradation products were detected in the same retention time of β-caryophyllene, the specificity of the method was demonstrated. The method was linear in the range of 0.14–0.68 μg mL⁻¹ of β-caryophyllene (r² > 0.999), and was also validated for precision (R.S.D. ≤ 5.0%), accuracy (97.85–101.87%) and robustness. Finally, the method was applied to quantification of β-caryophyllene content in the developed formulations.     

In-depth performance investigation of a nano-LC gradient generator

An innovative approach for nano-liquid chromatography (LC) gradient generation is presented. This system represents an optimized and refined version of a prototype proposed by the authors a few years ago: the current version is characterized by a new configuration that guarantees complete automation and easier operation. The core of the system is an electronically controlled, multiposition valve that hosts six loops, filled with different mobile phase compositions of increasing strength. A conventional flow rate of water is reduced at nano-scale through a split device to push the content of the on-line loop into the column. No mixing occurs between solvents inside the loops, due to the low flow rate and the reduced loop diameter. Valve actuation allows the selection of the on-line loop to obtain the solvent gradient. The evaluation of the system performance takes into account gradient accuracy, precision, delay time, shape (linear, convex, or concave), and organic solvent consumption. Results highlight the reliability and the competitiveness of the system, especially in terms of accuracy and precision. A comparison between the described system and a conventional split-based one demonstrates that the new approach reduces the solvent consumption by about 40 times, improving green chromatography and cutting laboratory costs.     

Structural Changes in a Protein Fragment from Abalone Shell during the Precipitation of Calcium Carbonate

Mineralized tissues grow through biologically controlled processes in which specific macromolecules are involved. Some of these molecules, which are present in very low concentrations and are difficult to localize and characterize, become entrapped inside the mineralized tissue. Herein, a protein fragment, GP, which was obtained by the alkaline digestion of the green sheet of the abalone shell, is used as a probe to study the changes in molecular structure that occur during the precipitation of calcium carbonate. This important goal was achieved by exploiting a fluorescent tag in GP. The experimental results that were obtained by using spectroscopic‐, chromatographic‐, and microscopic techniques indicate that GP controls the precipitation kinetics and morphology of calcium carbonate crystals, and that it only undergoes structural reorganization when entrapped inside calcium carbonate crystals. To the best of our knowledge, this report represents one of the first studies on the conformational changes of a protein fragment that is involved in biomineralization processes on moving from the solution phase into the mineral phase.     

Equivariant entire solutions to the elliptic system \Delta u=W_u(u) for general G-invariant potentials

We consider the system $\Delta u - W_u(u) = 0$ , where $u: \mathbb R ^n \rightarrow \mathbb R ^m$ , for potentials $W: \mathbb R ^m \rightarrow \mathbb R $ that possess $N$ global minima and are invariant under a finite reflection group $G$ . We prove the existence of nontrivial $G$ -equivariant entire solutions connecting the $N$ minima of $W$ . Our proof only requires the minima of $W$ to be nondegenerate and an assumption on the behavior of $W$ for large $u$ .     

Combinatorial peptide ligand libraries and plant proteomics: A winning strategy at a price

The mechanism of action and properties of a solid-phase ligand library made of hexapeptides (combinatorial peptide ligand libraries or CPLL), for capturing the “hidden proteome”, i.e. the low- and very low-abundance proteins constituting the vast majority of species in any proteome, as applied to plant tissues, are reviewed here. Plant tissues are notoriously recalcitrant to protein extraction and to proteome analysis. Firstly, rigid plant cell walls need to be mechanically disrupted to release the cell content and, in addition to their poor protein yield, plant tissues are rich in proteases and oxidative enzymes, contain phenolic compounds, starches, oils, pigments and secondary metabolites that massively contaminate protein extracts. In addition, complex matrices of polysaccharides, including large amount of anionic pectins, are present. All these species compete with the binding of proteins to the CPLL beads, impeding proper capture and identification / detection of low-abundance species. When properly pre-treated, plant tissue extracts are amenable to capture by the CPLL beads revealing thus many new species among them low-abundance proteins. Examples are given on the treatment of leaf proteins, of corn seed extracts and of exudate proteins (latex from Hevea brasiliensis). In all cases, the detection of unique gene products via CPLL capture is at least twice that of control, untreated sample.     

Oxygenated cembranoids of the decaryiol type from the Indonesian soft coral Lobophytum sp.

Three novel cembrane diterpenoids, decaryiols B-D (5-7), characterized by a bicyclic skeleton of the decaryiol-type, have been isolated from the Indonesian soft coral Lobophytum sp., along with three known cembranoids. The stereostructures of these metabolites have been established through extensive NMR spectroscopic analysis, application of the modified Mosher method, and chemical conversion. Cembranoids obtained from Lobophytum sp. (2-7) and six semisynthetic derivatives (9-14) prepared from decaryiol were tested for cell growth inhibitory activity against three different cell lines. O-Methyl decaryiol (10) exhibited a significant and selective activity against glioma cell lines.     

Steady‐state electrophoresis of RNA against a gradient of cationic charges in a polyacrylamide matrix

A novel method for separation of RNA fragments is reported here, based on migrating the polyanionic RNA fragments in a polycationic polyacrylamide gel, made by incorporating positively charged monomers (the Immobilines used for creating immobilized pH gradients) into the neutral polyacrylamide backbone. Separations are typically performed in a 0–10 mM, pK 10.3 Immobiline gradient under denaturing conditions (6 M urea). In the 100–1000 bp length, it is shown that separations of RNA are optimal and very sharp bands can be obtained, in comparison with conventional electrophoresis, due to the “focusing” effect originated by the charge balancing between the positively charged gel matrix and the negatively charged RNA species. Excellent separations are also obtained from micro‐RNAs, single‐stranded RNA molecules of 21–23 nucleotides in length, which appear to regulate gene expression in animal and plant tissues. As a third example, 2‐D runs in control and polycationic gels are shown. Under native conditions, RNAs are not aligned in a diagonal, suggesting that molecular shape has a strong influence on the interaction between RNA and the charged gel matrix. Thus, 2‐D runs in cationic matrices might be exploited for structural studies of RNA molecules.