DFT investigation of structural, electronic, and catalytic properties of diiron complexes related to the [2Fe](H) subcluster of Fe-only hydrogenases

Hydrogenases catalyze the reversible oxidation of dihydrogen to protons and electrons. The structures of two Fe-only hydrogenases have been recently reported [Peters, J. W.; Lanzilotta, W. N.; Lemon, B. J.; Seefeldt, L. C. Science 1998, 282, 1853-1858. Nicolet, Y.; Piras, C.; Legrand, P.; Hatchikian, E. C.; Fontecilla-Camps, J. C. Structure 1999, 7, 13-23], showing that the likely site of dihydrogen activation is the so-called [2Fe](H) cluster, where each Fe ion is coordinated by CO and CN(-) ligands and the two metals are bridged by a chelating S-X(3)-S ligand. Moreover, the presence of a water molecule coordinated to the distal Fe2 center suggested that the Fe2 atom could be a suitable site for binding and activation of H(2). In this contribution, we report a density functional theory investigation of the structural and electronic properties of complexes derived from the [(CO)(CH(3)S)(CN)Fe(II)(mu-PDT)Fe(II)(CO)(2)(CN)](-1) species, which is related to the [2Fe](H) cluster observed in Fe-only hydrogenases. Our results show that the structure of the [2Fe](H) cluster observed in the enzyme does not correspond to a stable form of the isolated cluster, in the absence of the protein. As a consequence, the reactivity of [(CO)(CH(3)S)(CN)Fe(II)(mu-PDT)Fe(II)(CO)(2)(CN)](-1) derivatives in solution may be expected to be quite different from that of the active site of Fe-only hydrogenases. In fact, the most favorable path for H(2) activation involves the two metal atoms and one of the bridging S atoms and is associated with a very low activation energy (5.3 kcal mol(-1)). The relevance of these observations for the catalytic properties of Fe-only hydrogenases is discussed in light of available experimental and theoretical data.     

Density functional theory investigation of the active site of Fe-hydrogenases. systematic study of the effects of redox state and ligands hardness on structural and electronic properties of complexes related to the [2Fe](H) subcluster

Density functional theory has been used to investigate complexes related to the [2Fe](H) subcluster of [Fe]-hydrogenases. In particular, the effects on structural and electronic properties of redox state and ligands with different sigma-donor pi-acceptor character, which replace the cysteine residue coordinated to the [2Fe](H) subcluster in the enzyme, have been investigated. Results show that the structural and electronic properties of fully reduced Fe(I)Fe(I) complexes are strongly affected by the nature of the ligand L, and in particular, a progressive rotation of the Fe(d)(CO)(2)(CN) group, with a CO ligand moving from a terminal to a semibridged position, is observed going from the softest to the hardest ligand. For the partially oxidized Fe(I)Fe(II) complexes, two isomers of similar stability, characterized either by a CO ligand in a terminal or bridged position, have been observed. The switching between the two forms is associated with a spin and charge transfer between the two iron atoms, a feature that could be relevant in the catalytic mechanism of dihydrogen activation. The structure of the fully oxidized Fe(II)Fe(II) models is extremely dependent on the nature of the L ligand; one CO group coordinated to Fe(d) switches from terminal to bridging position going from complexes characterized by neutral to anionic L ligands.     

The Michael addition of indoles to alpha,beta-unsaturated ketones catalyzed by CeCl3.7H2O-NaI combination supported on silica gel

Alkylation of indoles by means of the Michael addition has been the subject of a number of investigation. It is well established that regioselectivity in the additions of indoles to electron-deficient alkenes is strongly controlled by the reaction medium. In a continuation of the work on developing greener and cleaner technologies, the cerium(III) chloride heptahydrate and sodium iodide combination supported on silica gel catalyzes the alkylation of various indoles with alpha,beta-unsaturated ketones giving 3-(3-oxoalkyl)indole derivatives in good yields. The substitution on the indole nucleus occurred exclusively at the 3-position, and N-alkylation products have not been observed.     

A correlation between the extension of the miscibility gaps and the nature of the components in some binary systems

The liquid-liquid equilibrium regions in binary systems, one component of which is a dicarboxylic aliphatic acid, are examined by the linear equation in (x ₁/x₁)=a+bT. Theb term is plottedvs. the difference of polar character and one graph is obtained for the different systems.We thank the CNR (Rome) for financial aid.     

Iron-Iridium Mixed-Metal Carbonyl Clusters: A Mössbauer Study of the Structure and of the Adsorption of [Fe2Ir2(CO)12]2− on MgO

¹⁹³Ir and ⁵⁷Fe Mössbauer spectroscopy was used to investigate the structure of the [Fe₂Ir₂(CO)₁₂]^2- cluster compound and the adsorption of this cluster on hydrated MgO. Supported samples were prepared by impregnation of the magnesia with solutions of [Et₄N]₂[Fe₂Ir₂(CO)₁₂] in acetone. The Mössbauer and FT-IR spectra of the MgO-supported cluster confirm that the bimetallic carbonyl is molecularly physisorbed onto MgO without undergoing any transformation or decomposition. The easy solvent extraction of the intact cluster from the oxide surface excludes ion pairing between the cluster anion and the Mg²⁺ surface sites. Mössbauer spectra are in agreement with the refined structure of the molecular cluster and the temperature dependence of the ⁵⁷Fe Mössbauer spectra above 80 K is consistent with the low degree of interaction of the cluster with the support. This technique, therefore, appears to be promising in order to infer structural information when X-ray determination fails.     

Mechanism of formation and decay of the compound nuclei150Gd produced by two entrance channels (16O+134Ba) and (40Ar+110Pd)

Excitation functions have been drawn for evaporation residues issued from¹⁵⁰Gd, a compound nucleus produced either by¹⁶O ions on¹³⁴Ba, or by⁴⁰Ar on¹¹⁰Pd. Absolute cross sections were measured for^145–147Gd,^145–147Eu,^141m Sm,^143m Sm,^140m Pm and^139m Nd. Complete fusion cross sections have been obtained and compared to calculated estimations based, at low energies, on the simple expressionσ _CF=πR _Fuss ² (1?V _Fus/E) whereR _Fus andV _Fus are respectively the distance and the potential for fusion atdV/dr=0. For high energies σ_CF=πR _cr ² (1?V_cr/E) with the model of critical distanceR _cr and critical potentialV _cr. Thresholds energies have been determined with a particular care. The analysis of the shape and the width of excitation functions, particularly for the emission of 4 and 5 neutrons, has been carried out and compared to calculated values. The difference between argon and oxygen induced reactions has been attributed to the difference inl population in the entrance channel.     

Supercooling phenomena in the binary systems: Acetamide-electrolytes

This paper presents a final discussion on studies of solutions of electrolytes in molten acetamide. These studies deal with cryoscopic and ultrasonic (by shear waves) techniques and reveal the complexity of the behaviour of these systems due to strong ion-solvent interactions.

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Zusammenfassung Die über Lösungen von Elektrolyten in geschmolzenem Acetamid ausgeführten Untersuchungen werden diskutiert. Diese Untersuchungen erstrecken sich auf kryoskopische und Ultraschall-Methoden und vermitteln ein Bild von der durch starke Ionen-Lösungsmittel-Wechselwirkungen bedingten Komplexität des Verhaltens dieser Systeme.

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Thanks are due to CNR and MPI (Rome) for financial support, and to R. Borgarucci for technical assistance.     

Axial Imidazole Distortion Effects on the Catalytic and Binding Properties of Chelated Deuterohemin Complexes

The effect of strain in the axial coordination of imidazole to the heme has been studied in the chelate complexes deuterohemin-histidine (DH-His) and deuterohemin-alanylhistidine (DH-AlaHis). Molecular mechanics calculations indicate that three types of distortion of the axial ligand occur in DH-His, due to the relatively short length of the arm carrying the donor group: tilting off-axis, tipping, and inclination of the imidazole plane with respect to the axial Fe-N bond. The effects of tilting (Deltagamma approximately 10 degrees ) and inclination of the imidazole ring (Deltadelta approximately 17 degrees ) are dominant, while tipping is small and is probably of little importance here. By contrast, the axial imidazole coordination is normal in DH-AlaHis and other computed deuterohemin-dipeptide or -tripeptide complexes where histidine is the terminal residue, the only exception being DH-ProHis, where the rigidity of the proline ring reduces the flexibility of the chelating arm. The distortion in the axial iron-imidazole bond in DH-His has profound and negative influence on the binding and catalytic properties of this complex compared to DH-AlaHis. The former complex binds more weakly carbon monoxide, in its reduced form, and imidazole, in its oxidized form, than the latter. The catalytic efficiency in peroxidative oxidations is also reduced in DH-His with respect to DH-AlaHis. The activity of the latter complex is similar to that of microperoxidase-11, the peptide fragment incorporating the heme that results from hydrolytic cleavage of cytochrome c.     

Enthalpies of solvation for N-alkylamides in water and in carbon tetrachloride at 25°C

Molar enthalpies of solution at infinite dilution have been determined at 25°C for several N-alkyl and N,N-dialkylamides in water and in carbon tetrachloride, using a Calvet-type rotating calorimeter, and solution concentrations below 5×10^–2 molal. Relevant enthalpies of transfer between the two solvents also have been derived. Molar enthalpies of solvation have been obtained by adding enthalpies of vaporization to solution values. Results are compared with those of other laboratories on other substituted amides, and their dependence on the number of carbon atoms in the chain is discussed. A possible computation of solvation enthalpies of functional groups is suggested and results for hydration of peptide or similar groups present in the compounds examined are discussed in terms of current models of their hydration and hydrogen bond formation.Presented at the sixth Italian meeting on Calorimetry and Thermal Analysis (AICAT) held in Naples, December 4–7, 1984.     

Open-shell localized Hartree-Fock method based on the generalized adiabatic connection Kohn-Sham formalism for a self-consistent treatment of excited states

An effective exact-exchange Kohn-Sham approach for the treatment of excited electronic states, the generalized adiabatic connection open-shell localized Hartree-Fock (GAC-OSLHF) method is presented. The GAC-OSLHF method is based on the generalized adiabatic connection Kohn-Sham formalism and therefore capable of treating excited electronic states, which are not the energetically lowest of their symmetry. The method is self-interaction free and allows for a fully self-consistent computation of excited valence as well as Rydberg states. Results for atoms and small- and medium-size molecules are presented and compared to restricted open-shell Hartree-Fock (ROHF) and time-dependent density-functional results as well as to experimental data. While GAC-OSLHF and ROHF results are quite close to each other, the GAC-OSLHF method shows a much better convergence behavior. Moreover, the GAC-OSLHF method as a Kohn-Sham method, in contrast to the ROHF approach, represents a framework which allows also for a treatment of correlation besides an exchange by appropriate functionals. In contrast to the common time-dependent density-functional methods, the GAC-OSLHF approach is capable of treating doubly or multiply excited states and can be easily applied to molecules with an open-shell ground state. On the nodal planes of the energetically highest occupied orbital, the local multiplicative GAC-OSLHF exchange potential asymptotically approaches a different, i.e., nonzero, value than in other regions, an asymptotic behavior which is known from exact Kohn-Sham exchange potentials of ground states of molecules.