Development of an Accurate Mass Retention Time Database for Untargeted Metabolomic Analysis and Its Application to Plasma and Urine Pediatric Samples

Liquid-chromatography coupled to high resolution mass spectrometry (LC-HRMS) is currently the method of choice for untargeted metabolomic analysis. The availability of established protocols to achieve a high confidence identification of metabolites is crucial. The aim of this work is to describe the workflow that we have applied to build an Accurate Mass Retention Time (AMRT) database using a commercial metabolite library of standards. LC-HRMS analysis was carried out using a Vanquish Horizon UHPLC system coupled to a Q-Exactive Plus Hybrid Quadrupole-Orbitrap Mass Spectrometer (Thermo Fisher Scientific, Milan, Italy). The fragmentation spectra, obtained with 12 collision energies, were acquired for each metabolite, in both polarities, through flow injection analysis. Several chromatographic conditions were tested to obtain a protocol that yielded stable retention times. The adopted chromatographic protocol included a gradient separation using a reversed phase (Waters Acquity BEH C18) and a HILIC (Waters Acquity BEH Amide) column. An AMRT database of 518 compounds was obtained and tested on real plasma and urine samples analyzed in data-dependent acquisition mode. Our AMRT library allowed a level 1 identification, according to the Metabolomics Standards Initiative, of 132 and 124 metabolites in human pediatric plasma and urine samples, respectively. This library represents a starting point for future metabolomic studies in pediatric settings.     

Bragg grating writing through the polyimide coating of high NA optical fibres with femtosecond IR radiation

Bragg gratings are written with ultrafast 800 nm radiation and a phase mask through the polyimide polymer coatings of commercially available high NA fibres that are both unloaded and loaded with high pressure hydrogen gas. For polyimide coated fibres with very high germanium core concentrations, index modulations greater than 1 × 10⁻⁴ are induced. Stable core index modulations 60% of their original value were present after 115 h at 500 °C.     

Electron transfer in pristine and functionalised single-walled carbon nanotubes

Since their very first days, electron transfer has always played a special role in carbon nanotubes' life. In view of their structural and electronic uniqueness, carbon nanotubes have been proposed either as bulk electrode materials for sensing and biosensing in advanced electrochemical devices, or as molecular-sized electrodes for very fast electrode kinetics investigations. Alternatively, electron transfer has been used to probe the electronic properties of carbon nanotubes by either direct voltammetric inspection or coupling with spectroscopic techniques, ultimately allowing, in the case of true solutions of individual uncut single-walled carbon nanotubes (SWNTs), to single-out their redox potentials as a function of diameter. For their redox properties, as emerged from these studies, SWNTs represent unique building blocks for the construction of photofunctional nanosystems to be used in efficient light energy conversion devices.     

Amperometric Detection of Ethanol Vapors by Screen Printed Electrodes Modified by Paper Crowns Soaked with Room Temperature Ionic Liquids

A convenient assembly recently proposed for screen printed gold electrodes (SPEs) suitable for measurements in gaseous samples is here tested for the analysis of the ethanol content in alcoholic drinks. This assembly involves the use of a circular crown of filter paper, soaked in the room temperature ionic liquid (RTIL) 1-butyl-3-methylimidazolium hydrogen sulfate, which is simply placed upon a disposable screen printed cell, so as to contact the outer edge of the gold disc working electrode, as well as peripheral counter and reference electrodes. The electrical contact between the paper crown soaked in RTIL and the SPE electrode is assured by a gasket and all components are installed in a polylactic acid holder. This assembly provides a portable and disposable electrochemical platform, assembled by the easy immobilization onto a porous and inexpensive supporting material such as paper of a RTIL characterized by profitable electrical conductivity and negligible vapor pressure. The electroanalytical performance of this device was assayed for the flow injection analysis of the ethanol concentration in some real samples of wine and beer and the results obtained are compared with the alcoholic degree reported in the relevant bottle-labels, thus highlighting a substantially satisfactory agreement. Repeatable sharp peaks (RSD=6–8 %) were detected for ethanol over a wide linear range (1–20 % v/v in water) and a detection and quantitation limit of 0.55 % v/v and 1.60 % v/v were inferred for a signal-to-noise ratio of 3 and 10, respectively.     

Pore-filling-dependent selectivity effects in the vapor-phase separation of xylene isomers on the metal-organic framework MIL-47

Vapor-phase adsorption and separation of the C8 alkylaromatic components p-xylene, m-xylene, o-xylene, and ethylbenzene on the metal-organic framework MIL-47 have been studied. Low coverage Henry adsorption constants and adsorption enthalpies were determined using the pulse chromatographic technique at temperatures between 230 and 290 degrees C. The four C8 alkylaromatic components have comparable Henry constants and adsorption enthalpies. Adsorption isotherms of the pure components were determined using the gravimetric technique at 70, 110, and 150 degrees C. The adsorption capacity and steepness of the isotherms differs among the components and are strongly temperature dependent. Breakthrough experiments with several binary mixtures were performed at 70-150 degrees C and varying total hydrocarbon pressure from 0.0004 to 0.05 bar. Separation of the different isomers could be achieved. In general, it was found that the adsorption selectivity increases with increasing partial pressure or degree of pore filling. The separation at a high degree of pore filling in the vapor phase is a result of differences in packing modes of the C8 alkylaromatic components in the pores of MIL-47.     

Fullerenes: multitask components in molecular machinery

Molecular machines are molecular-scale devices that carry out predetermined tasks derived from molecular motion. This Minireview illustrates how fullerenes can be used as multitask building blocks in molecular machinery, providing new perspectives for fullerenes. Indeed, C(60) can be applied as a photo- and electroactive stopper owing to its size, as a probe for molecular motion as a result of its well-defined physicochemical properties, and to induce motion through pi-pi interactions. Such molecular motion can be employed to modulate light-driven electron-transfer events, extending the potential applications of molecular machines to the typical fields of application of fullerenes.     

An electrochemically driven molecular shuttle controlled and monitored by C60

Herein we describe a fullerene rotaxane, in which shuttling between two well-defined and distant co-conformations is both induced and monitored by the C60 stopper.     

Length exclusion in the adsorption of chain molecules on chabazite type zeolites

In the adsorption of linear C1-C8 alkanes, alkenes and alcohols on zeolite chabazite, molecules smaller than 6.7 A are adsorbed in significant amounts, whereas longer chains are almost fully excluded from the micropores.     

Point and ring defects in nematics under capillary confinement

The textures exhibited by nematic liquid crystals confined to cylindrical capillaries under homeotropic anchoring have been studied for nearly thirty years. One of the reasons behind this maintained interest is that the processing of many high-performance fibers including carbon fibers and spider silks involves these textures. Three of these textures, the planar radial with line defect, the planar polar with two line defects (PPLD), and the escape radial (ER), are relatively well understood. A third one, the escape radial with point defects presents, however, some unresolved issues and recent studies have questioned the real nature and dimensionality of the defects involved in this texture. It seems that the defects are not in the form of points but rather in the form of closed lines or rings. This paper presents a detailed study on the connection between point and ring defects in a cylindrical cavity using three-dimensional simulations based on the continuum Landau-de Gennes theory. The results show that true point defects cannot exist in cylindrical cavities and that the merging of two ringlike defects may lead to two qualitatively different stable textures, namely, the ER and PPLD textures. The various results are in qualitative agreement with recent molecular dynamic studies and with theoretical predictions based on experimental observations. The predictions provide new insights on the structural connections between synthetic and biological superfibers.