Theory construction in auditory perception: need for development of teaching materials

Beginning investigators in the field of auditory perception receive essentially no instruction in how to go about constructing new and useful theories. This article considers some of the characteristics of good theory in this field and is intended to serve as a call for further discussion of the processes by which such theory is created and for the development of appropriate theory-construction teaching materials.     

Direct identification of proteins from T47D cells and murine brain tissue by matrix-assisted laser desorption/ionization post-source decay/collision-induced dissociation

The purpose of this study is to determine the feasibility of the direct matrix-assisted laser desorption/ionization (MALDI) identification of proteins in fixed T47D breast cancer cells and murine brain tissues. The ability to identify proteins from cells and tissue may lead to biomarkers that effectively predict the onset of defined disease states, and their dynamic behavior could be an important hint for drug target discoveries. Direct tissue application of trypsin allows protein identification in cells and tissues, while maintaining spatial integrity and intracellular organization. Using a chemical printer, matrix was co-registered on trypsinized human T47D breast cancer cells and cryo-preserved sections of murine brain tissue, followed by MALDI post-source decay (PSD) or MALDI collision-induced dissociation (CID), respectively. Mass-to-charge (m/z) data from the cells and brain tissues were processed using Mascot software interrogation of the National Center for Biotechnology Information (NCBI) database. Histone H2B was identified from cultured T47D human breast cancer cells. Tubulin beta2 was identified from mouse brain cortex following an induced stroke. These results suggest that MALDI PSD/CID, combined with bioinformatics, can be used for the direct identification of proteins from cells and tissues. Refinements in preparation techniques may improve this approach to provide a tool for quantitative proteomics and clinical analysis.     

4-Aryl-1,3,2-oxathiazolylium-5-olates as pH-controlled NO-donors: the next generation of S-nitrosothiols

S-Nitrosothiols (RSNOs) are important exogenous and endogenous sources of nitric oxide (NO) in biological systems. A series of 4-aryl-1,3,2-oxathiazolylium-5-olates derivatives with varying aryl para-substituents (-CF3, -H, -Cl, and -OCH3) were synthesized. These compounds were found to release NO under acidic condition (pH = 5). The decomposition pathway of the aryloxathiazolyliumolates proceeded via an acid-catalyzed ring-opening mechanism after which NO was released and an S-centered radical was generated. Electron paramagnetic resonance (EPR) spin trapping studies were performed to detect NO and the S-centered radical using the spin traps of iron(II) N-methyl-D-glucamine dithiocarbamate [(MGD)2-FeII] and 5,5-dimethyl-1-pyrroline N-oxide (DMPO). Also, EPR spin trapping and UV-vis spectrophotometry were used to analyze the effect of aryl para substitution on the NO-releasing property of aryloxathiazolyliumolates. The results showed that the presence of an electron-withdrawing substituent such as -CF3 enhanced the NO-releasing capability of the aryloxathiazolyliumolates, whereas an electron-donating substituent like methoxy (-OCH3) diminished it. Computational studies using density functional theory (DFT) at the PCM/B3LYP/6-31+G**//B3LYP/6-31G* level were used to rationalize the experimental observations. The aryloxathiazolyliumolates diminished susceptibility to reduction by ascorbate or gluthathione, and their capacity to cause vasodilation as compared to other S-nitrosothiols suggests potential application in biological systems.     

Vibrationally selective optimal control of alignment and orientation using infrared laser pulses: application to carbon monoxide

Optimal control methods are used to study molecular alignment and orientation using infrared laser pulses. High order molecule-field interactions are taken into account through the use of the electric-nuclear Born-Oppenheimer approximation [G. G. Balint-Kurti et al., J. Chem. Phys. 122, 084110 (2005)]. High degrees of alignment and orientation are achieved by optimized infrared laser pulses of duration on the order of one rotational period of the molecule. It is shown that, through the incorporation of a vibrational projection operator into the optimization procedure, it is possible not only to maximize the alignment and orientation but also to bring the whole system into a single prescribed vibrational manifold. Numerical calculations are performed for carbon monoxide using ab initio potential energies computed in the presence of external electric fields.     

Resonance Cassie-Wenzel wetting transition for horizontally vibrated drops deposited on a rough surface

The transition between the Cassie and Wenzel wetting regimes has been observed under horizontal vibrations of a water drop placed on the rough micrometrically scaled polymer pattern. The observed transition has a distinct resonance character. The resonance frequencies as established experimentally coincide with the calculated eigenfrequencies of capillary-gravity standing waves on the drop surface. The resonance Cassie-Wenzel transition is related to the displacement of the triple line caused by both the inertia force and the increase in the Laplace pressure. This strengthens the idea that the Cassie-Wenzel wetting transition is most likely a 1D affair stipulated by the triple-line behavior. The study of the vibrated drop deposited on the rough surface supplied valuable information concerning the Cassie-Wenzel wetting transition.     

Localization due to damage in fiber-reinforced composites

Fiber pull-out is one of the fracture features of fiber-reinforced ceramic matrix composites. The onset of this mechanism is predicted by using Continuum Damage Mechanics, and corresponds to a localization of the deformations. Alter deriving two damage models from a uniaxial bundle approach, different configurations are analysed through analytical and numerical (F.E. calculations) methods. For one model some very simple criteria can be derived, whereas for the second one none of these criteria can be derived and the general criterion of localization has to be used.     

The Influence of the Framework: An Anion‐Binding Study Using Fused [n]Polynorbornanes

A series of bis‐thiourea‐functionalized [n]polynorbornane hosts ( 1 – 6 ) with increasing size were synthesized and their anion‐binding properties were evaluated by using ¹H NMR spectroscopic titration and Job’s plot analysis. The larger bis‐thiourea‐[3]polynorbornane scaffolds 4 and 5 bound acetate in a 1:1 (cooperative) arrangement, whereas the corresponding smaller norbornane host 2 , identical in preorganization, bound acetate in a 1:2 (independent) arrangement. In contrast, the size of the framework had no influence on the binding of dihydrogenphosphate. These results clearly highlight the subtle influence that the framework itself can have on host–guest interactions.     

On the growth behavior of one-dimensional acceleration waves in the linear theory of viscoelasticity

The growth behavior of one-dimensional accelaration waves which propagate in linear viscoelastic materials with time-dependent relaxation functions is examined. Such a time dependence arises either by linearizing the constitutive equation of a simple material about an arbitrary deformation history or by linearizing about a natural state when there is an aging process taking place in the body. Explicit results are obtained for simple types of time dependence and the results are then compared with those which follow in the usual theory of isothermal linear viscoelasticity.     

Crossover from superexchange to hopping as the mechanism for photoinduced charge transfer in DNA hairpin conjugates

The mechanism and dynamics of photoinduced charge separation and charge recombination have been investigated in synthetic DNA hairpins possessing donor and acceptor stilbenes separated by one to seven A:T base pairs. The application of femtosecond broadband pump-probe spectroscopy, nanosecond transient absorption spectroscopy, and picosecond fluorescence decay measurements permits detailed analysis of the formation and decay of the stilbene acceptor singlet state and of the charge-separated intermediates. When the donor and acceptor are separated by a single A:T base pair, charge separation occurs via a single-step superexchange mechanism. However, when the donor and acceptor are separated by two or more A:T base pairs, charge separation occurs via a multistep process consisting of hole injection, hole transport, and hole trapping. In such cases, hole arrival at the electron donor is slower than hole injection into the bridging A-tract. Rate constants for charge separation (hole arrival) and charge recombination are dependent upon the donor-acceptor distance; however, the rate constant for hole injection is independent of the donor-acceptor distance. The observation of crossover from a superexchange to a hopping mechanism provides a "missing link" in the analysis of DNA electron transfer and requires reevaluation of the existing literature for photoinduced electron transfer in DNA.