Decongestion of methylene spectra in biological and non-biological systems using picosecond 2DIR spectroscopy measuring electron-vibration–vibration coupling

Methylene is found in the repeat units of many polymers including proteins. In some cases it appears to be a useful reporter of variation in local environment whilst in other contexts average behaviour seems to dominate. In this paper we apply a particular 2DIR technique to a range of systems containing methylene groups, showing that mode frequencies, linewidths and splittings can be easily extracted even when the infrared absorption bands are too congested to allow reliable analysis. 2DIR spectra of polyethylene and several liquid alkanes are compared and it is shown for the case of l-arginine that the methylene scissor modes are split and that this can be resolved by tracking the 2DIR spectrum as a function of time. Calculations from first principles reveal that for most of the methylene modes studied, electrical anharmonicity is the dominant contributor to the 2DIR cross-peak intensity, with the mechanical anharmonicity making only a small contribution.     

Assessment of the UVR protection provided by different tree species

In recent years, SunSmart campaigns have emphasized the importance of the use of shade as a strategy in the reduction of human exposure to solar UV radiation (UVR), particularly in early life with the provision of shade in schools. Trees can play an important role in shade provision, either as the main shade provider or to augment shade structures and increase UVR protection provided to the general population. A study to measure the protection provided by a range of trees common in Australian urban environments was undertaken during the summers of 2004/2005 and 2005/2006. Solar UVR beneath the trees was measured using UVR sensitive polysulphone badges positioned horizontally within the shaded area and were compared with those in full sunshine to give an indication of the protection provided. Measurements made on sunny days during the months of October to April indicated that the shade cover provided by the trees depended upon the tree species and changed with season as a result of changing foliage and sun angles. Measured protection factors ranged from 5 to 10 and were generally a maximum in the height of summer when the sun was highest in the sky and the foliage was densest.     

Reinvestigation of the electronic spectroscopy of the Au-Ar complex

The Au-Ar complex is reinvestigated employing resonance-enhanced multiphoton ionization spectroscopy. Spectra are reported, corresponding to the atomic transition Au(6p<--6s). This electronic excitation yields (2)Pi and (2)Sigma(+) states of Au-Ar, which interact under the influence of spin-orbit coupling. The spectra are consistent with strong sigma-pi mixing induced by the large spin-orbit coupling of Au, leading to strong interaction of the two Omega=12 states, which arise from the Ar((1)S(0))+Au((2)P(12,32)) asymptotes, and the consequent formation of a "shelf" on the outer wall of the lowest Omega=12 state. In addition, high-level ab initio calculations are reported on the ground electronic state, X (2)Sigma(+), including extrapolation to the basis set limit.     

Oxygen dynamics in epitaxial YBa2Cu3O7-δ thin films

We have investigated epitaxial YBCO films by Perturbed γγ-Angular Correlation Spectroscopy (PAC) using ¹¹¹In probe atoms. The probes substitute on the yttrium lattice site and hyperfine parameters have been determined unambiguously. Excellent agreement is achieved with full potential electric field gradient (efg) calculations. Good reproducibility has been achieved by our preparation method allowing us to study the influence of oxygen motion on the structural orthorhombic to tetragonal phase transition. This revised version was published online in August 2006 with corrections to the Cover Date.     

Multi-gigabit WDM optical networking for next generation avionics system communications

It is envisaged that photonic networking will play a significant role in improving performance and reliability in both civil and military avionics systems. Of all the available photonic multiplexing technologies, wavelength-division multiplexing (WDM) has been the primary focus of attention within mainstream telecommunications offering increased throughput at a reasonable cost, with scope for enhanced routing flexibility, connectivity and network survivability. A direct mapping of techniques and devices from the maturing telecommunications sector is, however, not possible because of the stringent requirements of systems operating in the hostile aerospace environment. This paper gives an outline of these requirements and discusses, in detail, the design and development of a multi-gigabit, broadband optical WDM network architecture, specifically for use on aerospace platforms. The paper will also discuss a key element in the system, the arrayed-waveguide grating (AWG) wavelength multiplexing component, which has been designed to allow operation over the full military temperature specification without environmental conditioning.     

Unravelling overlaps and torsion-facilitated coupling using two-dimensional laser-induced fluorescence

Two-dimensional laser-induced fluorescence (2D-LIF) spectroscopy is employed to identify contributions to fluorescence excitation spectra that arise from both overlapping bands and coupling between zero-order states (ZOSs). Evidence is found for the role of torsional motion in facilitating the coupling between vibrations that particularly involves the lowest-wavenumber out-of-plane vibrational modes. The experiments are carried out on jet-cooled p-fluorotoluene, where the molecules are initially in the lowest two torsional levels. Here we concentrate on the 390–420?cm^?1 features in the S₁?←?S₀ excitation spectrum, assigning the features seen in the 2D-LIF spectrum, aided by separate dispersed fluorescence spectra. The 2D-LIF spectra allow the overlapping contributions to be cleanly separated, including some that arise from vibrational-torsional coupling. Various coupling routes open up because of the different symmetries of the lowest two torsional modes; these combine with the vibrational symmetry to provide new symmetry-allowed vibration-torsion (‘vibtor’) interactions, and the role of the excited m?=?1 torsional level is found to be significant.     

NUMERICAL SIMULATION OF THE XZ TAURI SUPERSONIC ASTROPHYSICAL JET

Computational gas dynamical simulations using the WENO-LF method are applied to modeling the high Mach number astrophysical jet XZ Tauri, including the effects of radiative cooling. Mach 55 simulations of the pulsed proto-jet are presented and analyzed in terms of interacting nonlinear waves： terminal Mach disks, bow shocks, and Meshkov-Richtmyer instabilities of the leading jet contact boundary.     

Low-lying isomers and finite temperature behavior of (H2O)6 -

(H2O)(6) (-) appears as a "magic" number water cluster in (H2O)(n) (-) mass spectra. The structure of the (H2O)(6) (-) isomer dominating the experimental population has been established only recently [N. I. Hammer et al., J. Phys. Chem. A 109, 7896 (2005)], and the most noteworthy characteristic of this isomer is the localization of the excess electron in the vicinity of a double-acceptor monomer. In the present work, we use a quantum Drude model to characterize the low-energy isomers and the finite temperature properties of (H2O)(6) (-). Comparison with ab initio calculations shows that the use of a water model employing distributed polarizabilities and distributed repulsive sites is necessary to correctly reproduce the energy ordering of the low-lying isomers. Both the simulations and the ab initio calculations predict that there are several isomers of (H2O)(6) (-) significantly lower in energy than the experimentally observed species, suggesting that the experimental distribution is far from equilibrium.     

FTIR microscopy of biological cells and tissue: data analysis using resonant Mie scattering (RMieS) EMSC algorithm

Transmission and transflection infrared microscopy of biological cells and tissue suffer from significant baseline distortions due to scattering effects, predominantly resonant Mie scattering (RMieS). This scattering can also distort peak shapes and apparent peak positions making interpretation difficult and often unreliable. A correction algorithm, the resonant Mie scattering extended multiplicative signal correction (RMieS-EMSC), has been developed that can be used to remove these distortions. The correction algorithm has two key user defined parameters that influence the accuracy of the correction. The first is the number of iterations used to obtain the best outcome. The second is the choice of the initial reference spectrum required for the fitting procedure. The choice of these parameters influences computational time. This is not a major concern when correcting individual spectra or small data sets of a few hundred spectra but becomes much more significant when correcting spectra from infrared images obtained using large focal plane array detectors which may contain tens of thousands of spectra. In this paper we show that, classification of images from tissue can be achieved easily with a few (<10) iterations but a reliable interpretation of the biochemical differences between classes could require more iterations. Regarding the choice of reference spectrum, it is apparent that the more similar it is to the pure absorption spectrum of the sample, the fewer iterations required to obtain an accurate corrected spectrum. Importantly however, we show that using three different non-ideal reference spectra, the same unique correction solution can be obtained.     

Determining a Rotation of a Tetrahedron from a Projection

The following problem, arising from medical imaging, is addressed: Suppose that T is a known tetrahedron in ?³ with centroid at the origin. Also known is the orthogonal projection U of the vertices of the image ?T of T under an unknown rotation ? about the origin. Under what circumstances can ? be determined from T and U?