Biosynthetic Conclusions from the Functional Dissection of Oxygenases for Biosynthesis of Actinorhodin and Related Streptomyces Antibiotics

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Highlights? ActVA-ORF5 is a flavin-dependent monooxygenase required for actinorhodin biosynthesis ? ActVA-ORF5 and its three close homologs were functionally dissected ? ActVA-ORF5 and Gra-21 are bifunctional at C-6/C-8, while Med-7 acts only for C-6 ? AlnT exhibits different regiospecificity for oxidation of tricyclic substrates     

Reconstitution of Nucleosome Demethylation and Catalytic Properties of a Jumonji Histone Demethylase

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Highlights? Catalytic domain of JMJD2A (cJMJD2A) removes methyl marks in a distributive manner ? Homogeneously methylated nucleosomes were used as substrates ? Quantitative assay for nucleosome demethylation has been developed     

Voltammetric Determination of Boric Acid Using the Ternary Complexation System with Salicylaldehyde and H‐Acid

A square‐wave voltammetric method for the determination of boric acid in water has been described based on the new understanding of the electrochemical behavior of boric acid‐Azomethine H complexation. Salicylaldehyde and H‐acid were used as the starting materials of boric acid‐Azomethine H complex and their concentrations were optimized for boric acid determination in water. A glassy carbon electrode, instead of a conventional mercury electrode, was used in the measurement. The detection limit of the proposed method was 0.10 mg B dm^?3. The proposed method was successfully used for boric acid determination in the water from a seawater desalination RO plant.     

A novel condition for capillary electrophoretic analysis of reductively aminated saccharides without removal of excess reagents

We have identified novel CE conditions for the separation of 7‐amino‐4‐methylcoumarin‐labeled monosaccharides and oligosaccharides from glycoproteins. Using a neutrally coated capillary and alkaline borate buffer containing hydroxypropylcellulose and ACN, saccharide derivatives form anionic borate complexes, which move from the cathode to the anode in an electric field and are detected near the anodic end. Excess labeling reagents and other fluorescent products remain at the cathodic end. Fluorimetric detection using an LED as a light source enables determination of monosaccharide derivatives with good linearity between at least 0.4 and 400 μM, may correspond to 140 amol to 140 fmol. The lower LOD (S/N = 5) is only 80 nM in the sample solution (ca. 28 amol). The results were comparable to reported values using fluorometric detection LC. The method was also applied to the analysis of oligosaccharides that were enzymatically released from glycoproteins. Fine resolution enables profiling of glycans in glycoproteins. The applicability of the method was examined by applying it to other derivatives labeled with nonacidic tags such as ethyl p‐aminobenzoate‐ and 2‐aminoacridone‐labeled saccharides.     

Tailoring of ionic supramolecular assemblies based on ammonium carboxylates toward liquid‐crystalline micellar cubic mesophases

Ionic liquid crystals based on ionic complexation of tris(2‐aminoethyl)amine (1) with 3,4,5‐tris(7,7,8,8,9,9,10,10,11,11,12,12,12‐tridecafluorododecyloxy)benzoic acid (2) and with 3,4,5‐tris(2‐octyldodecyloxy)benzoic acid (3) were investigated. The ionic complex with the partially fluorinated alkyl chains (1·2) exhibited a morphological transition from a hexagonal columnar mesophase to a Pm3n micellar cubic phase upon increasing the molar ratio of 2 to 1. For the complex with the branched alkyl chains (1·3) a micellar cubic mesophase was exclusively generated at appropriate composite ratios. The generation of the micellar cubic mesophases is attributed to the introduction of the laterally expanded volume of the alkyl chains compared with the corresponding normal dodecyl chains. Their thermal stabilities were most enhanced at a specific molar ratio of 1:5 for 1·2 and 1:4 for 1·3. This result corresponds to the most suitable chain volume for the stable micellar cubic mesophase.     

NMR and DFT studies on persistent carbocations derived from benzo[kl]xanthene,dibenzo[d,d′]benzo[1,2‐b:4,3‐b′]difuran,and dibenzo[d,d′]benzo[1,2‐b:4,5‐b′]difuran in superacidic media

Persistent carbocations generated by the protonation of hetero‐polycyclic aromatic compounds with oxygen atom(s) were studied by experimental NMR and density function theory calculations. Benzo[kl]xanthene ( 1 ), dibenzo[d,d′]benzo[1,2‐b:4,3‐b′]difuran ( 2 ), and dibenzo[d,d′]benzo[1,2‐b:4,5‐b′]difuran ( 3 ) were synthesized by the annulation of arenediazonium salts. Compound 1 in FSO₃H‐SbF₅ (4:1)/SO₂ClF and 3 in FSO₃H‐SbF₅ (1:1)/SO₂ClF ionized to 1aH⁺ with protonation at C(4) and to 3aH⁺ with protonation at C(6), and these cations were successfully observed by NMR at low temperatures. The density function theory calculations indicated that 1aH⁺ and 3aH⁺ were the most stable protonated carbocations and that 2 should ionize to 2aH⁺ with protonation at C(6). According to the changes in ¹³C chemical shifts (Δδ¹³C), the positive charge was delocalized into the naphthalene unit for 1aH⁺ , into one benzo[b,d]furan unit for 2aH⁺ , and into one benzo[b,d]furan unit for 3aH⁺ . Copyright © 2015 John Wiley & Sons, Ltd.     

Study on transport of molecules in gel by surface-enhanced Raman spectroscopy

Cellulose - Surface-enhanced Raman spectroscopy (SERS)-based biosensors have recently been extensively developed because of their high sensitivity and nondestructive nature. Conventional SERS...     

Enhanced CO2 adsorptivity of SWCNT by polycyclic aromatic hydrocarbon intercalation

We tuned the electronic properties of single wall carbon nanotube (SWCNT) with intercalation of naphthalene derivatives (NDs) having different electron donor or acceptor property in the SWCNT bundles. Characterization of the adsorbed SWCNT with Raman spectroscopy and electrical conductivity measurement clearly indicate the charge transfer interaction of ND molecules with SWCNT. Also X-ray diffraction supports the intercalation of ND molecules in the interstitial spaces and groove sites of SWCNT bundle. Intercalation of ND molecules enhances remarkably the CO₂ adsorptivity, which can be ascribed to the key importance of the interaction of the quadrupole moment of CO₂ with the local electrical field on the SWCNT induced by the charge transfer interaction.     

Unsymmetrical Pincer‐Type Ruthenium Complex Containing β‐Protic Pyrazole and N‐Heterocyclic Carbene Arms: Comparison of Brønsted Acidity of NH Groups in Second Coordination Sphere

A reaction of a 2‐(imidazol‐1‐yl)methyl‐6‐(pyrazol‐3‐yl)pyridine with [RuCl₂(PPh₃)₃] resulted in tautomerization of the imidazole unit to afford the unsymmetrical pincer‐type ruthenium complex 2 containing a protic pyrazole and N‐heterocyclic carbene (NHC) arms. Deprotonation of 2 with one equivalent of a base led to the formation of the NHC–pyrazolato complex 3 , indicating that the protic NHC arm is less acidic. When 2 was treated with two equivalents of a base under H₂ or in 2‐propanol, the hydrido complex 4 containing protic NHC and pyrazolato groups was obtained through metal–ligand cooperation.     

Mapping Platinum Species in Polymer Electrolyte Fuel Cells by Spatially Resolved XAFS Techniques

There is limited information on the mechanism for platinum oxidation and dissolution in Pt/C cathode catalyst layers of polymer electrolyte fuel cells (PEFCs) under the operating conditions though these issues should be uncovered for the development of next‐generation PEFCs. Pt species in Pt/C cathode catalyst layers are mapped by a XAFS (X‐ray absorption fine structure) method and by a quick‐XAFS(QXAFS) method. Information on the site‐preferential oxidation and leaching of Pt cathode nanoparticles around the cathode boundary and the micro‐crack in degraded PEFCs is provided, which is relevant to the origin and mechanism of PEFC degradation.