Formal catalytic asymmetric total synthesis of fostriecin

The common synthetic intermediate of a potent and promising anticancer agent, fostriecin, was synthesized using a unique method that combines four catalytic asymmetric reactions as shown above.     

Sequence-dependent conformational energy of DNA derived from molecular dynamics simulations: toward understanding the indirect readout mechanism in protein-DNA recognition

Sequence dependence of DNA conformation plays a crucial role in its recognition by proteins and ligands. To clarify the relationship between sequence and conformation, it is necessary to quantify the conformational energy and specificity of DNA. Here, we make a systematic analysis of dodecamer DNA structures including all the 136 unique tetranucleotide sequences at the center by molecular dynamics simulations. Using a simplified conformational model with six parameters to describe the geometry of adjacent base pairs and harmonic potentials along these coordinates, we estimated the equilibrium conformational parameters and the harmonic potentials of mean force for the central base-pair steps from many trajectories of the simulations. This enabled us to estimate the conformational energy and the specificity for any given DNA sequence and structure. We tested our method by using sequence-structure threading to estimate the conformational energy and the Z-score as a measure of specificity for many B-DNA and A-DNA crystal structures. The average Z-scores were negative for both kinds of structures, indicating that the potential of mean force from the simulation is capable of predicting sequence specificity for the crystal structures and that it may be used to study the sequence specificity of both types of DNA. We also estimated the positional distribution of conformational energy and Z-score within DNA and showed that they are strongly position dependent. This analysis enabled us to identify particular conformations responsible for the specificity. The presented results will provide an insight into the mechanisms of DNA sequence recognition by proteins and ligands.     

Solid state photoreactions occurring at the interface between crystallites of two different organic compounds

This paper deals with the solid state bimolecular photoreactions occurring at the interface between crystallites of two different organic compounds prepared as a polycrystalline mixture by melting-resolidification. The photoreactions include the photoaddition of NH compounds to aromatic and olefinic double bonds, hydrogen abstraction, condensation reaction via photoelectron transfer and [2+2] photoaddition. Particular attention is focused on the characterization of the polycrystalline mixture, the selectivity of the photoreactions in the solid state compared with those in the solution phase and the factors controlling the photoreactions.     

High-resolution proton magnetic resonance and infrared spectra of poly(vinyl formal) and its model compounds

High-resolution proton magnetic resonance and infrared spectra of poly(vinyl formal) were studied in comparison with those of the model formals obtained from stereoisomers of pentane-2,4-diol and heptane-2,4,6-triol in order to learn spectral changes due to differences of the steric structures of the polymer. In the NMR spectrum of transformal obtained from dl diol or dl,dl (syndiotactic) triol, all proton signals were well interpreted by assuming a rapid chair-chair inversion of the formal ring. On the other hand, no such inversion was observed spectroscopically in cis-formal obtained from the meso diol or meso,meso (isotactic) triol, and the cis-formal ring was supposed to take a diequatorial form preferentially. Consequently, dioxymethylene protons gave a single peak (equivalent) in trans-formal and an AB quartet (nonequivalent) in cis-formal. In the spectra of poly(vinyl formal), the dioxymethylene signal was an overlap of the singlet and quartet in dimethylsulfoxide solution. Observations of the spectra of various poly(vinyl formals) obtained from poly(vinyl alcohols) of different tacticities and study of temperature dependence of the signal have shown that the singlet and quartet are attributed to trans- and cis- formals, respectively, in the polymer spectrum also. In the infrared spectra of poly(vinyl formals), the 800 and 785 cm^-1 bands were found to be related to cis- and trans-formal rings respectively. A linear relationship was confirmed between D₇₈₅/D₈₀₀ and trans/cis ratios determined from the peak intensities of the dioxymethylene proton signals.     

Selective generation of organic aggregates included within metal-organic micropores through vapor adsorption

The ethanol vapor adsorption behavior and the inclusion crystal structure of a 1D-transformable coordination polymer host were characterized. The adsorption jump was observed during phase transition or two-phase equilibrium with abnormal adsorption enthalpy caused by the nature of "mass induced phase transition." The included ethanol guests selectively form O-H...O hydrogen bonded pairs inside channels, suggesting selective construction of a specific cluster/aggregate in pores under control of thermodynamic factors and cooperative intermolecular interactions among the guest and channel surface.     

Binding of sulfonamides to erythrocyte proteins and possible drug-drug interaction

The mode of binding of sulfonamides to erythrocyte proteins and possible drug-drug interaction between those compounds in erythrocytes resulting in changes in tissue levels were studied in rats using zonisamide (a novel antiepileptic agent possessing a sulfonamide group), several other sulfonamides and some antiepileptics without a sulfonamide group. In Michaelis-Menten plottings, the sulfonamide was found to be concentrated into erythrocytes in vitro and in vivo in a saturable high-affinity mode and in a linear low-affinity mode at ordinary therapeutic plasma levels through a simple diffusion process. Concentration in erythrocytes was affected by the presence of albumin in the extracellular medium. The cellular sulfonamide was readily replaced by extracellular sulfonamides in vitro. Even in vivo, erythrocyte levels of zonisamide were lowered by administration of other sulfonamides, although the plasma and tissue levels were not significantly changed since the plasma and tissue compartments of zonisamide were large relative to the erythrocyte compartment at ordinary therapeutic dose levels of zonisamide in animals and man. Therefore, disposition of zonisamide was not significantly influenced by other sulfonamides, but it is suggested that drug-drug interaction affecting the tissue levels may occur for a combination of sulfonamides with extremely different affinities for erythrocytes and low therapeutic plasma levels.     

Analysis of the release process of phenylpropanolamine hydrochloride from ethylcellulose matrix granules

The release properties of phenylpropanolamine hydrochloride (PPA) from ethylcellulose (EC, ethylcellulose 10 cps (EC#10) and/or 100 cps (EC#100)) matrix granules prepared by the extrusion granulation method were examined. The release process could be divided into two parts, and was well analyzed by applying square-root time law and cube root law equations, respectively. The validity of the treatments was confirmed by the fitness of the simulation curve with the measured curve. At the initial stage, PPA was released from the gel layer of swollen EC in the matrix granules. At the second stage, the drug existing below the gel layer dissolved, and was released through the gel layer. Also, the time and release ratio at the connection point of the simulation curves was examined to determine the validity of the analysis. Comparing the release properties of PPA from the two types of EC matrix granules, EC#100 showed more effective sustained release than EC#10. On the other hand, changes in the release property of the EC#10 matrix granule were relatively more clear than that of the EC#100 matrix granule. Thus, it was supposed that EC#10 is more available for controlled and sustained release formulations than EC#100.     

On the use of methyl substituted poly(vinylnaphthalene) as a reversible singlet oxygen carrier

Poly(1,4-dimethyl-6-vinylnaphthalene) and poly(1,2,4-trimethyl-6-vinylnaphthalene) react with singlet oxygen to give corresponding endoperoxide polymers which on warming generate singlet oxygen efficiently. Singlet oxygenations by the use of these polymers have been described.