Poly(vinylferrocenium) coated disposable pencil graphite electrode for DNA hybridization

Poly(vinylferrocenium) (PVF⁺) modified electrode was developed in this study for the electrochemical sensing of DNA based on the oxidation signals of polymer, adenine and guanine. Experimental parameters, such as; polymeric film thickness, DNA immobilization time and DNA concentration were examined in order to obtain more sensitive and selective electrochemical signals. After optimization studies, DNA hybridization was investigated.     

Comparing Singlet Oxygen Generation of Schiff Base Substituted Novel Silicon Phthalocyanines by Sonophotochemical and Photochemical Applications

Although the sonophotodynamic method has an effective therapeutic outcome for anticancer treatment compared with the photodynamic method, there are not enough related studies in the literature and this study aims to contribute to the development of sonophotodynamic studies. For this purpose, the Schiff base substituted silicon phthalocyanines were designed and synthesized as effective sensitizer candidates and the photophysicochemical and sonophotochemical features of the phthalocyanines were examined to increase singlet oxygen efficiency. The calculated Φ_Δ values indicate that the contribution of substituent groups improved the production of singlet oxygen compared with silicon (IV) phthalocyanine dichloride (SiPcCI₂) and also the sonophotochemical applications increased the singlet oxygen yields. The Φ_Δ values (Φ_Δ = 0.76 for axially bis-{4-[(E)-(pyridin-3-ylimino)methyl]phenol} substituted silicon (IV) phthalocyanine ( 2a ), 0.68 for axially bis-4-[(E)-{[(pyridin-3-yl)methyl]imino}methyl]phenol substituted silicon (IV) phthalocyanine ( 2b ) in photochemical study) reached to Φ_Δ = 0.98 for 2a , 0.94 for 2b in sonophotochemical study. This article will enrich the literature on increasing singlet oxygen yield.     

Theoretical investigation of the Anti-Parkinson drug rasagiline and its salts: conformations and infrared spectra

The conformational analysis of rasagiline [N-propargyl-1(R)-aminoindan] was performed by the density functional theory (DFT) B3LYP method using the 6–31++G (d,p) basis set. A single point energy calculations based on the B3LYP optimized geometries were also performed at MP2/6-31++G (d, p) level. The vibrational frequencies of the most stable conformer of rasagiline was calculated at the B3LYP level and vibrational assignments were made for normal modes on the basis of scaled quantum mechanical force field (SQM) method. The influence of mesylate and ethanedisulfonate salts on the geometry of rasagiline free base and its normal modes are also discussed.      

In vivo biodistribution of <Superscript>131</Superscript>I labeled bleomycin (BLM) and isomers (A2 and B2) on experimental animal models

Bleomycins (BLMs; BLM, A2, and B2) were labeled with ¹³¹I and radiopharmaceutical potentials were investigated using animal models in this study. Quality control procedures were carried out using thin layer radiochromatography (TLRC), high performance liquid chromatography (HPLC), and liquid chromatography (LC/MS/MS). Labeling yields of radiolabeled BLMs were found to be 90, 68, and 71%, respectively. HPLC chromatograms were taken for BLM and cold iodinated BLM (¹²⁷I-BLM). Five peaks were detected for BLM and three peaks for ¹²⁷I-BLM in the HPLC studies. Two peaks belong to isomers of BLM. The isomers of BLM were purified with using HPLC. Biological activity of BLM was determined on male Albino Wistar rats by biodistribution and scintigraphic studies were performed for BLMs by using New Zelland rabbits. The biodistribution results of ¹³¹I-BLM showed high uptake in the stomach, the bladder, the prostate, the testicle, and the spinal cord in rats. Scintigraphic results on rabbits agrees with that of biodistributional studies on rats. The scintigraphy of radiolabeled isomers (¹³¹I-A2 and ¹³¹I-B2) are similiarly found with that of ¹³¹I-BLM.     

Synthesis, characterization and aggregation behaviour of novel peripherally tetra-substituted octacationic water soluble metal-free and metallophthalocyanines

In this study, a new phthalonitrile derivative 3 bearing 1,3-bis[3(dimethylamino)phenoxy]propan-2-ol 1, metal-free phthalocyanine (Pc) 4, metallophthalocyanines (MPcs) 5–7 and their quaternized derivatives 4a–7a were synthesized. Metal-free Pc 4 was prepared by cyclotetramerization of phthalonitrile derivate 3 and MPcs 5–7 were synthesized by heating 3 with NiCl₂, CoCl₂ and CuCl₂ in n-pentanol in the presence of 1,8-diazabicyclo[5.4.0]undec-7-ene, respectively. Quaternization of the dimethylamino functionality produced quaternized octacationic water soluble metal-free, Ni, Co and Cu Pcs which were soluble in water, DMF, DMSO. The aggregation behaviour of these compounds were investigated in different concentrations of chloroform for metal-free, Ni, Co and Cu Pcs. The effect of solvents on absorption spectra were studied in various organic solvents. The novel compounds were characterized using IR, ¹H-, ¹³C NMR, UV–vis and MS spectral data.     

2-Morpholinoethyl-substituted <Emphasis Type="Italic">N</Emphasis>-heterocyclic carbene (NHC) precursors and their silver(I)NHC complexes: synthesis,crystal structure and in vitro anticancer properties

In this study, a series of unsymmetrically 2-morpholinoethyl-substituted benzimidazolium salts and their Ag(I)NHC complexes were synthesized. The 1,3-dialkylbenzimidazolium salts (1a–d) were synthesized in dimethylformamide at 80 °C temperature from the N-(2-morpholinoethyl)benzimidazole and alkyl halides. The Ag(I)NHC complexes (2a–d) were synthesized in dichloromethane at room temperature from the benzimidazolium salts and Ag₂O. All compounds were characterized by spectroscopic techniques (NMR and FT-IR) and elemental analyses. Also, the salt 1c and complex 2c were characterized by single-crystal X-ray crystallography. Anticancer activities of 2-morpholinoethyl-substituted benzimidazolium salts and Ag(I)NHC complexes were investigated against the MCF-7 breast cancer cell line, and the IC₃₀ and IC₅₀ values of these compounds were found to be in the range of 241–490 and 6–14 µM, respectively.     

RNA-sensitive N-isopropylacrylamide/vinylphenylboronic acid random copolymer

Random copolymers of N-isopropylacrylamide (NIPA) and 4-vinylphenylboronic acid (VPBA) were obtained by solution polymerization using 2,2′-azobisizobutyronitrile as the initiator in ethanol at 65 °C. NIPA-co-VPBA copolymer exhibited both temperature- and pH-sensitivity. Thermally reversible phase transitions were observed both in the acidic and alkaline pH region for the copolymers produced with different VPBA/NIPA feed ratios. The pH dependency of the lower critical solution temperature (LCST) was stronger for the copolymers produced with higher VPBA feed concentrations. RNA was selected as a model biomolecule having vicinal-diol and amino groups that were potentially reactive with the boronic acid groups of NIPA-co-VPBA copolymer. The effect of RNA concentration on the LCST of NIPA-co-VPBA copolymer was investigated in aqueous media at different pHs. Although no significant effect was observed at pH 4, 7 or 10.5, the LCST decreased linearly with increasing RNA concentration at a pH approximately equal to the pK_a of boronic acid. This behavior was explained by considering the binding of RNA onto the copolymer chains to occur via two types of complex formation. For the formation of these complexes, the amino and vicinal-diol groups of RNA should react with the boronic acid groups of the copolymer in the tetrahedral anionic form. The results indicated that NIPA-co-VPBA copolymer could be utilized as a new reagent for the determination of RNA concentration in aqueous media. The proposed method was valid for the RNA concentration range of 0–4 g · mL⁻¹.

The schematical representation of the possible interactions between NIPA-co-VPBA copolymer and RNA. (A) A typical structure of single-stranded RNA. (B) Tetrahedral anionic form of boronic acid groups. (C) The interaction between the amino groups of the unpaired bases of RNA and the boronic acid groups of the copolymer. (D) Cyclic borate ester formation by the interaction between vicinal diol groups located at the 3′-end of RNA and boronic acid groups of the copolymer.     

Superparamagnetic iron oxide nanoparticle (SPION) mediated in vitro radiosensitization at megavoltage radiation energies

The purpose of this study was to assess SPION’s in vitro radiosensitizer effect at 6MV-energies and to calculate nanoparticle enhancement ratio (NER) of SPIONs. Citrate coated-SPION’s were synthesized. Trypan-blue, metabolic activity tests were performed. Cell cultures were irradiated at 0,2,4,6,8 Gy at 6MV-energy. Clonogenic survival assays, NER calculations were carried out. SPIONs were biocompatible. NERs were cell-line specific and dose dependent. The highest radiosensitization were seen in radiosensitive MCF-7 and MDAH-2447 cells at 2 Gy (NER:1.49 and 1.39 respectively), in relatively radioresistant MDA-MB-231 cells at 4 Gy (NER:1.20). By increasing doses radiosensitizer effect disappeared. There is possibility that by synergistic effect, SPIONs may cause dose-dependent and cell-line specific radiosensitization at 6MV.     

Effect of reactive and nonreactive surface modifications and compatibilizer use on mechanical and flame-retardant properties of linear low-density polyethylene filled with huntite and hydromagnesite mineral

Journal of Thermal Analysis and Calorimetry - In the current study, huntite and hydromagnesite (HH) was used as flame-retardant additive in linear low-density polyethylene (LLDPE). The effect of HH...