Spectrophotometric Studies of Entrapped Thymol Phtalein pH Indicator into Sol‐Gel Matrix

This research involves the behavior of thymol phtalein pH indicator entrapped into the sol‐gel derived inorganic matrix. The method is based on the physical entrapment of the reagent molecules in the sol‐gel matrix. The immobilized thymol phthalein pH indicator shows behavior similar to its solution counterpart. The UV/vis spectra indicate that the thymol phthalein retains its structure during the sol‐gel reactions in terms of response to pH. Thymol phthalein can be regarded as uniformly distributed in the sol‐gel matrix. This observation has been confirmed using polarized microscopy. This research shows that thymol phtalein can be immobilized in sol‐gel glasses and used as a solid pH sensor.     

Entrapment of pH Universal Indicator into Sol‐Gel Matrix

This study involves the behavior of universal indicator entrapped into the sol‐gel matrix. The encapsulation of universal indicator has been prepared by acid catalyzed sol‐gel reaction of tetraethylorthosilicate (TEOS) in the presence of universal indicator to produce transparent monolithic silica doping with universal indicator. The immobilized universal indicator pH‐indicator shows behavior similar to its solution counterpart. The UV/VIS spectra indicate that the universal indicator retains its structure during the sol‐gel reactions in terms of response to pH. The universal indicator can be regarded as uniformly distributed in the sol‐gel matrix. The use of SDS surfactant has positive effects on the immobilized universal indicator monolithic disk due to homogenizing the polymerizing system. This observation has been confirmed using polarized microscopy.     

An improved capillary electrophoresis method for in vitro monitoring of the challenging early steps of Aβ1–42 peptide oligomerization: Application to anti‐Alzheimer's drug discovery

We report an improved CE method to monitor in vitro the self‐assembly of monomeric amyloid β‐peptide (42 amino acids amyloid β‐peptide, Aβ_1–42) and in particular the crucial early steps involved in the formation of the neurotoxic oligomers. In order to start the kinetics from the beginning, sample preparation was optimized to provide samples containing exclusively the monomeric form. The CE method was also improved using a dynamic coating and by reducing the separation distance. Using this method, the disappearance of the monomer as well as the progressive formation of four species during the self‐assembly process can now be monitored and quantified over time. The hydrodynamic radius of the species present at the initial kinetics step was estimated around 1.8 nm by Taylor dispersion analysis while SDS‐PAGE analyses showed the predominance of the monomer. These results confirmed that the Aβ_1–42 species present at this initial time was the monomer. Methylene blue, an anti‐Alzheimer disease candidate, was then evaluated. In spite of an oligomerization inhibition, the enhanced disappearance of the Aβ_1–42 monomer provoked by methylene blue was demonstrated for the first time. This method, allowing the monomeric and smallest oligomeric species to be monitored, represents a new accurate and precise way to evaluate compounds for drug discovery.     

1, 3-dipolar cycloaddition of C-phenyl carbamoyl-N-phenyl nitrone with some dialkyl-substituted 2-benzylidenecyclopropane-1,1-dicarboxylates: theoretical analysis of mechanism and regioselectivity

The regiochemistry of 1,3-dipolar cycloaddition reactions of C-phenyl carbamoyl-N-phenyl nitrone with some dialkyl-substituted 2-benzylidenecyclopropane-1,1-dicarboxylates as dipolarophile was investigated using density functional theory-based reactivity indexes and activation energy calculations at B3LYP/6-31G(d) level of theory. Analysis of the geometries and bond orders at the TS structures associated with the different reaction pathways shows that these 1,3-dipolar cycloaddition reactions occur via an asynchronous concerted mechanism. Analysis of the local electrophilicity and nucleophilicity indexes based on Parr functions only for reaction between 1 + 2a and based on Fukui functions only for 1 + 2b gives correct regioselectivity. The theoretical results obtained in the work clearly predict the regiochemistry of the isolated cycloadducts and agree to experimental results.     

Efficient Catalytic and Thermal Syntheses of Novel Thiadiazole,Triazole, Benzothiazole,and Fused Quinazoline Derivatives

Russian Journal of Organic Chemistry - A thiourea derivative, 4-chloro-N-[(4-chlorophenyl)carbamothioyl]benzamide, was oxidized with iodine in acetic acid to give the corresponding disulfide,...     

Comparison of the activation time effects and the internal energy distributions for the CID,PQD and HCD excitation modes

Reproducibility among different types of excitation modes is a major bottleneck in the field of tandem mass spectrometry library development in metabolomics. In this study, we specifically evaluated the influence of collision voltage and activation time parameters on tandem mass spectrometry spectra for various excitation modes [collision‐induced dissociation (CID), pulsed Q dissociation (PQD) and higher‐energy collision dissociation (HCD)] of Orbitrap‐based instruments. For this purpose, internal energy deposition was probed using an approach based on Rice–Rampserger–Kassel–Marcus modeling with three thermometer compounds of different degree of freedom (69, 228 and 420) and a thermal model. This model treats consecutively the activation and decomposition steps, and the survival precursor ion populations are characterized by truncated Maxwell–Boltzmann internal energy distributions. This study demonstrates that the activation time has a significant impact on MS/MS spectra using the CID and PQD modes. The proposed model seems suitable to describe the multiple collision regime in the PQD and HCD modes. Linear relationships between mean internal energy and collision voltage are shown for the latter modes and the three thermometer molecules. These results suggest that a calibration based on the collision voltage should provide reproducible for PQD, HCD to be compared with CID in tandem in space instruments. However, an important signal loss is observed in PQD excitation mode whatever the mass of the studied compounds, which may affect not only parent ions but also fragment ions depending on the fragmentation parameters. A calibration approach for the CID mode based on the variation of activation time parameter is more appropriate than one based on collision voltage. In fact, the activation time parameter in CID induces a modification of the collisional regime and thus helps control the orientation of the fragmentation pathways (competitive or consecutive dissociations). Copyright © 2014 John Wiley & Sons, Ltd.     

Study of the usability of sinusoidal function heat flux based on enthalpy-porosity technique for PCM-related applications

Journal of Thermal Analysis and Calorimetry - The present study summarizes a two-dimensional (2D) numerical simulation of a phase change material (PCM) melting/solidification processes in a square...     

Identification tree based on fragmentation rules for structure elucidation of organophosphorus esters by electrospray mass spectrometry

Organophosphorus compounds have played important roles as pesticides, chemical warfare agents and extractors of radioactive material. Structural elucidation of phosphonates poses a particular challenge because their initial forms can be hydrolyzed, thus, degradation products may predominate in samples acquired in the field. The analysis of non‐volatile organophosphorus compounds and their degradation products is possible using electrospray tandem mass spectrometry ESI‐MS/MS. Here, we present a generic strategy that allows the unambiguous identification of substituents for two families of organophosphorus compounds: the phosphonates and phosphates. General fragmentation rules were deduced based on the study of decomposition pathways of 55 organophosphorus esters, including examples found in the literature. Multistage MS (MSⁿ) experiments at high resolution in a hybrid mass spectrometer provide accurate mass measurements, whereas collision‐induced dissociation experiments in a triple quadrupole give access to small fragment ions. The creation of a specific nomenclature for each possible structure of organophosphorus compound, depending on the alkyl side chain linked to the oxygen, was achieved by applying these fragmentation rules. This led to the creation of an ‘identification tree’ based upon the unique consecutive decomposition pathways uncovered for each individual compound. Hence, seven structural motifs were created that orient an unequivocal identification using the ‘identification tree’. Despite the similar structures of the ensemble of phosphate and phosphonate esters, distinct identifications based upon characteristic neutral losses and diagnostic fragment ions were possible in all cases. Copyright © 2013 John Wiley & Sons, Ltd.     

Gamma spectrometry of 234Th (238U) in environmental samples

Environmental samples from a wide-range of aquatic and soil deposits, mainly of Scandinavian origin, were analysed for 234Th (238U) using low-level gamma-spectrometry. The diversity of the samples, in terms of composition and ages, allowed a detailed evaluation of the analytical problems associated with gamma-ray spectrometry with focus on the reliability of the 234Th peaks for absolute determination of the 234Th activities. The X-ray contributions in the 93 keV peak were compared with the corresponding self-absorption corrected activities of the 63 keV peak. These X-ray contributions were, also, correlated with the 238U, 232Th, 235U, 40K and 137Cs activities of the samples. Despite the difficulties imposed by the self-absorption corrections, the 63 keV peak is still the best option. Large variability in the 93 keV peak interferences, due to X-rays from Th, exists in sediment and soil samples. Only in the case of young ombrotrophic peat samples was it possible to conclude that the 93 keV peak is free from X-ray contributions and can be as good as the 63 keV Monte-Carlo self-absorption corrected peak. X-ray contributions in the samples correlated with the 238U and 232Th activities, only, in closed environmental systems where a secular equilibrium with the daughters of the U/Th series can occur.