Fourier transform infrared and Raman spectra, vibrational assignment and density functional theory calculations of naphthazarin

FT Raman and FTIR spectra of Naphthazarin (5,8-dihydroxy-1,4-naphthoquinone) and its deuterated analogue are recorded. Comparison between the spectra obtained by two techniques, a series of density functional theory (DFT) calculations and the spectral behavior upon deuteration were used for the assignment of the vibrational spectra of this compound. The calculated vibrational frequencies by the B3LYP, B3PW91, G96LYP, G96P86, and MPWLYP density functionals are generally consistent with the observed spectra. Infrared and Raman vibrational transitions predicted by B3LYP/6-311++G** are reported for the titled compound and its deuterated analogous and the assignments are discussed. All experimental and theoretical results support a relatively weak hydrogen bond in naphthazarin (NZ), compared with that in the enol form of normal beta-diketones. The observed nuOH/nuOD and gammaOH/gammaOD appear at about 3060/2220 and 790/560 cm(-1), respectively, which are consistent with the calculated hydrogen bond geometry and proton chemical shift results. Two bands at about 350 and 290 cm(-1) are assigned to the O...O stretching modes belong to A1 and B2 species, respectively.     

Mechanism-of-action determination of GMP synthase inhibitors and target validation in Candida albicans and Aspergillus fumigatus

Mechanism-of-action (MOA) studies of bioactive compounds are fundamental to drug discovery. However, in vitro studies alone may not recapitulate a compound's MOA in whole cells. Here, we apply a chemogenomics approach in Candida albicans to evaluate compounds affecting purine metabolism. They include the IMP dehydrogenase inhibitors mycophenolic acid and mizoribine and the previously reported GMP synthase inhibitors acivicin and 6-diazo-5-oxo-L-norleucine (DON). We report important aspects of their whole-cell activity, including their primary target, off-target activity, and drug metabolism. Further, we describe ECC1385, an inhibitor of GMP synthase, and provide biochemical and genetic evidence supporting its MOA to be distinct from acivicin or DON. Importantly, GMP synthase activity is conditionally essential in C. albicans and Aspergillus fumigatus and is required for virulence of both pathogens, thus constituting an unexpected antifungal target.     

Simple design of an aligned transparent biofilm by magnetic particles and its cellular study

The aim of this study was to produce aligned biodegradable films. In this study, we used magnetic microparticles and strong magnetic field for orientation of gelatin gels. The samples were evaluated by microscopic analyses and cell culture assays with Schwann cells. Results of structural analyses showed a good arrangement and orientation of films under strong magnetic field with movement of magnetite particles. Cellular experiments showed a good cell adhesion and orientation on the designed films compared with those on unmodified ones. This aligned guide appears to have the right organization for testing in vivo nerve tissue engineering studies. Copyright © 2016 John Wiley & Sons, Ltd.     

An ab initio study on substituent and cooperative effects in bifurcated fluorine bonds

Bifurcated fluorine bond (BFB) interactions are studied in model binary complexes pairing N-formyl formamide derivatives and FX molecules (X = F, CN, NC, CF₃ and CCH) by means of ab initio calculations. The calculated F···O binding distances in these complexes are in the range of 2.813–3.048 Å. The corresponding interaction energies lie in a narrow range, from?2.25 to ?16.49 kJ/mol. The nature of BFBs is analysed by a vast number of methods including molecular electrostatic potential, quantum theory of atoms in molecules, non-covalent interaction index and natural bond orbital methods. According to the energy decomposition analysis, the electrostatic and dispersion effects have a dominant role in the formation of these complexes. The formation of a hydrogen- and lithium-bonding interaction tends to increase the strength of BFBs in the ternary XF:NFF-H:NH₃ and XF:NFF-Li:NH₃ complexes, respectively.     

Design and synthesis of new imidazo[1,2-b]pyrazole derivatives,in vitro α-glucosidase inhibition,kinetic and docking studies

Molecular Diversity - A new series of imidazo[1,2-b]pyrazole derivatives 4a–o was designed, synthesized, and screened for in vitro α-glucosidase inhibitory activity. All compounds showed...     

Synthesis and Characterization of Bone Binding Antibiotic-1 (BBA-1), a Novel Antimicrobial for Orthopedic Applications

Osteomyelitis and orthopedic infections are major clinical problems, limited by a lack of antibiotics specialized for such applications. In this paper, we describe the design and synthesis of a novel bone-binding antibiotic (BBA-1) and its subsequent structural and functional characterization. The synthesis of BBA-1 was the result of a two-step chemical conjugation of cationic selective antimicrobial-90 (CSA-90) and the bisphosphonate alendronate (ALN) via a heterobifunctional linker. This was analytically confirmed by HPLC, FT-IR, MS and NMR spectroscopy. BBA-1 showed rapid binding and high affinity to bone mineral in an in vitro hydroxyapatite binding assay. Kirby—Baur assays confirmed that BBA-1 shows a potent antibacterial activity against Staphylococcus aureus and methicillin-resistant S. aureus comparable to CSA-90. Differentiation of cultured osteoblasts in media supplemented with BBA-1 led to increased alkaline phosphatase expression, which is consistent with the pro-osteogenic activity of CSA-90. Bisphosphonates, such as ALN, are inhibitors of protein prenylation, however, the amine conjugation of ALN to CSA-90 disrupted this activity in an in vitro protein prenylation assay. Overall, these findings support the antimicrobial, bone-binding, and pro-osteogenic activities of BBA-1. The compound and related agents have the potential to ensure lasting activity against osteomyelitis after systemic delivery.     

Efficient Reduction of Dioxygen with Ferrocene Catalyzed by Thiocarbohydrazone Tetranuclear Cobalt(III) Coordination Compound

The synthesis, characterization and crystal structure of a tetranuclear cobalt(III) coordination compound, [Co₄(L)₄](HSO₄)₂(SO₄)·4.1(CH₃OH)·H₂O ( 1 ), with thiocarbohydrazone based ligand is reported. This compound can efficiently catalyze the reduction of oxygen (O₂) by a weak electron donor ferrocene, (Fc), at the polarized water/dichloroethane interface which was investigated by voltammetry and biphasic shake-flask experiments. Compound 1 contains four cobalt cores which are connected together by sulphur atoms. By having four cobalt cores this coordination compound provides a multi-electron transfer system for oxygen reduction reactions. The results also suggest that compound 1 catalyzes decomposition of H₂O₂ at the interface.     

Organobase-catalyzed one-pot three-component synthesis of novel pyrano[2,3-d][1,3]thiazolo[3,2-a]pyrimidine derivatives

Research on Chemical Intermediates - An efficient, simple and fast procedure has been developed for the synthesis of a novel types of pyrano[2,3-d][1,3]thiazolo[3,2-a]pyrimidine derivatives through...     

Influence of diazonium-induced surface grafting on PES NF membrane fouling reduction in algal-rich water treatment

The algae bloom phenomenon incurs a major challenge to conventional drinking water treatment processes due to the discharges of a large amount of intracellular pollutant and odor compounds in the water sources. Membrane processes have been considered as promising technologies to treatment of algal-rich water due to complete algal cell rejection however, its application has been limited by membrane fouling. In this work, the high-performance loose antifouling PES NF membranes were fabricated using diazonium-induced grafting and applied for treating real algal effluent. The modified membranes exhibited complete algal dye removal and turbidity removal throughout the long-term filtration. Also, the coupling and radically modified membranes can be able to removed COD by up to 90% and 88%, respectively, while a removal efficiency of 24% was observed for bare membrane. It is worth noting that, a relative smooth behavior in permeate flux by loose modified membranes during prolonged algal dye filtration, demonstrating exceptional anti-fouling property of membranes. In addition, the fouled modified membranes were effectively recovered by water flushing. Both loose modified membranes exhibited excellent resistance in the strongly acidic environment. These high performance antifouling NF membranes affords an innovative methodology toward the treatment of algal-rich water.