Case Study of N-iPr versus N-Mes Substituted NHC Ligands in Nickel Chemistry: The Coordination and Cyclotrimerization of Alkynes at [Ni(NHC)2]

A case study on the effect of the employment of two different NHC ligands in complexes [Ni(NHC)₂] (NHC=ⁱPr₂Im^Me 1^Me , Mes₂Im 2 ) and their behavior towards alkynes is reported. The reaction of a mixture of [Ni₂(ⁱPr₂Im^Me)₄(μ-(η² : η²)-COD)] B / [Ni(ⁱPr₂Im^Me)₂(η⁴-COD)] B’ or [Ni(Mes₂Im)₂] 2 , respectively, with alkynes afforded complexes [Ni(NHC)₂(η²-alkyne)] (NHC=ⁱPr₂Im^Me: alkyne=MeC≡CMe 3 , H₇C₃C≡CC₃H₇ 4 , PhC≡CPh 5 , MeOOCC≡CCOOMe 6 , Me₃SiC≡CSiMe₃ 7 , PhC≡CMe 8 , HC≡CC₃H₇ 9 , HC≡CPh 10 , HC≡C(p-Tol) 11 , HC≡C(4-^tBu-C₆H₄) 12 , HC≡CCOOMe 13 ; NHC=Mes₂Im: alkyne=MeC≡CMe 14 , MeOOCC≡CCOOMe 15 , PhC≡CMe 16 , HC≡C(4-^tBu-C₆H₄) 17 , HC≡CCOOMe 18 ). Unusual rearrangement products 11 a and 12 a were identified for the complexes of the terminal alkynes HC≡C(p-Tol) and HC≡C(4-^tBu-C₆H₄), 11 and 12 , which were formed by addition of a C−H bond of one of the NHC N-ⁱPr methyl groups to the C≡C triple bond of the coordinated alkyne. Complex 2 catalyzes the cyclotrimerization of 2-butyne, 4-octyne, diphenylacetylene, dimethyl acetylendicarboxylate, 1-pentyne, phenylacetylene and methyl propiolate at ambient conditions, whereas 1^Me is not a good catalyst. The reaction of 2 with 2-butyne was monitored in some detail, which led to a mechanistic proposal for the cyclotrimerization at [Ni(NHC)₂]. DFT calculations reveal that the differences between 1^{M e} and 2 for alkyne cyclotrimerization lie in the energy profile of the initiation steps, which is very shallow for 2 , and each step is associated with only a moderate energy change. The higher stability of 3 compared to 14 is attributed to a better electron transfer from the NHC to the metal to the alkyne ligand for the N-alkyl substituted NHC, to enhanced Ni-alkyne backbonding due to a smaller C_NHC−Ni−C_NHC bite angle, and to less steric repulsion of the smaller NHC ⁱPr₂Im^Me.     

Using In Silico Fragmentation to Improve Routine Residue Screening in Complex Matrices

Targeted residue screening requires the use of reference substances in order to identify potential residues. This becomes a difficult issue when using multi-residue methods capable of analyzing several hundreds of analytes. Therefore, the capability of in silico fragmentation based on a structure database (“suspect screening”) instead of physical reference substances for routine targeted residue screening was investigated. The detection of fragment ions that can be predicted or explained by in silico software was utilized to reduce the number of false positives. These “proof of principle” experiments were done with a tool that is integrated into a commercial MS vendor instrument operating software (UNIFI) as well as with a platform-independent MS tool (Mass Frontier). A total of 97 analytes belonging to different chemical families were separated by reversed phase liquid chromatography and detected in a data-independent acquisition (DIA) mode using ion mobility hyphenated with quadrupole time of flight mass spectrometry. The instrument was operated in the MS^E mode with alternating low and high energy traces. The fragments observed from product ion spectra were investigated using a “chopping” bond disconnection algorithm and a rule-based algorithm. The bond disconnection algorithm clearly explained more analyte product ions and a greater percentage of the spectral abundance than the rule-based software (92 out of the 97 compounds produced ≥1 explainable fragment ions). On the other hand, tests with a complex blank matrix (bovine liver extract) indicated that the chopping algorithm reports significantly more false positive fragments than the rule based software.

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Porous electrospun nanocomposite mats based on chitosan–cellulose nanocrystals for wound dressing: effect of surface characteristics of nanocrystals

Randomly oriented fiber mats of chitosan–polyethylene oxide matrix reinforced with cellulose nanocrystals (CNCs) were prepared by electrospinning technique. The cellulose nanocrystals used were isolated using hydrochloric acid (CNC_HCl) or sulphuric acid (\({\text{CNC}}_{{{\text{H}}_{ 2} {\text{SO}}_{ 4} }}\)) and the concentration of CNCs was 50 wt% in the electrospun mats. The surface characteristics of the nanocrystals were found to affect the dispersion, viscosity, conductivity and zeta-potential of the respective spinning solutions and resulted in better spinnability, homogeneity as well as crosslinking of CNC_HCl based nanocomposite fiber mats compared to \({\text{CNC}}_{{{\text{H}}_{ 2} {\text{SO}}_{ 4} }}\) ones. The microscopy studies showed that the diameter of the electrospun fibers decreased with the inclusion of both types of nanocrystals and that crosslinking decreased the porosity of the mats. The tensile strength and tensile modulus of the mats increased with the addition of nanocrystals and increased further for the CNC_HCl based mats (58 MPa, 3.1 GPa) after crosslinking. The as-spun CNC_HCl based mats had average pore diameters of 1.6 μm and porosity of 38 %. The water vapor permeability and the O₂/CO₂ transmission increased with the addition of CNC_HCl. The used nanocrystals as well as electrospun mats showed non-cytotoxic impact on adipose derived stem cells (ASCs), which was considered favorable for wound dressing.     

Regioselective Catalytic and Stepwise Routes to Bulky,Functional‐Group‐Appended,and Luminescent 1,2‐Azaborinines

The regioselective syntheses of 1,2‐azaborinines is achieved using an unsymmetrical iminoborane through both catalytic and stepwise modular routes. The 1,2‐azaborinine ring can be selectively functionalized in the 4‐ and/or 6‐position through control of the stepwise reaction sequence, allowing access to vinyl‐functionalized and redox‐active, luminescent, donor‐functionalized 1,2‐azaborinines. The electrochemistry and photochemistry of a tetraarylamine‐substituted 1,2‐azaborinine are studied. Cyclic voltammetry of this compound, relative to a non‐B,N‐substituted reference molecule, showed an additional oxidation wave assigned to the oxidation of the azaborinine ring, while emission spectroscopy indicated that the azaborinine was significantly more fluorescent than the reference.     

Gel formation in suspensions of oppositely charged colloids: mechanism and relation to the equilibrium phase diagram

We study gel formation in a mixture of equally-sized oppositely charged colloids both experimentally and by means of computer simulations. Both the experiments and the simulations show that the mechanism by which a gel is formed from a dilute, homogeneous suspension is an interrupted gas-liquid phase separation. Furthermore, we use Brownian dynamics simulations to study the relation between gel formation and the equilibrium phase diagram. We find that, regardless of the interaction range, an interrupted liquid-gas phase separation is observed as the system is quenched into a state point where the gas-liquid separation is metastable. The structure of the gel formed in our experiments compares well with that of a simulated gel, indicating that gravity has only a minor influence on the local structure of this type of gel. This is supported by the experimental evidence that gels squeezed or stretched by gravity have similar structures, as well as by the fact that gels do not collapse as readily as in the case of colloid-polymer mixtures. Finally, we check whether or not crystallites are formed in the gel branches; we find crystalline domains for the longer ranged interactions and for moderate quenches to the metastable gas-liquid spinodal regime.     

Spherulitic growth of hen egg-white lysozyme crystals

In protein crystallography, spherulites are considered the result of a failed crystallization experiment. Understanding the formation of these structures may contribute to finding methods to prevent their formation. Here, we present an in situ study on lysozyme spherulites grown from sodium nitrate and sodium thiocyanate solutions, investigating their morphology and growth kinetics using optical microscopy. In a morphodrom, we indicate the conditions at which spherulites form for the lysozyme-nitrate system, showing that liquid-liquid phase separation is not a prerequisite to form sheaflike spherulites and that supersaturation is not the only factor determining their creation. Despite their sheaflike morphology, the spherulites all appear to be formed through heterogeneous nucleation. The spherulites are of a new polymorphic form and are less stable than the monoclinic form. For a single needle, growth kinetics indicate surface processes to be the rate-limiting step during growth, but for an entire spherulite volume, diffusion still plays a role. Spherulites simulated by using a time-dependent, tip-splitting model are found to compare well to experimentally observed spherulites.     

The difference between doubly nonnegative and completely positive matrices

The convex cone of n×n completely positive (CP) matrices and its dual cone of copositive matrices arise in several areas of applied mathematics, including optimization. Every CP matrix is doubly nonnegative (DNN), i.e., positive semidefinite and component-wise nonnegative, and it is known that, for n4 only, every DNN matrix is CP. In this paper, we investigate the difference between 5×5 DNN and CP matrices. Defining a bad matrix to be one which is DNN but not CP, we: (i) design a finite procedure to decompose any n×n DNN matrix into the sum of a CP matrix and a bad matrix, which itself cannot be further decomposed; (ii) show that every bad 5×5 DNN matrix is the sum of a CP matrix and a single bad extreme matrix; and (iii) demonstrate how to separate bad extreme matrices from the cone of 5×5 CP matrices.     

A novel microfluidics-based method for probing weak protein-protein interactions

We report the use of a novel microfluidics-based method to detect weak protein-protein interactions between membrane proteins. The tight junction protein, claudin-2, synthesised in vitro using a cell-free expression system in the presence of polymer vesicles as membrane scaffolds, was used as a model membrane protein. Individual claudin-2 molecules interact weakly, although the cumulative effect of these interactions is significant. This effect results in a transient decrease of average vesicle dispersivity and reduction in transport speed of claudin-2-functionalised vesicles. Polymer vesicles functionalised with claudin-2 were perfused through a microfluidic channel and the time taken to traverse a defined distance within the channel was measured. Functionalised vesicles took 1.19 to 1.69 times longer to traverse this distance than unfunctionalised ones. Coating the channel walls with protein A and incubating the vesicles with anti-claudin-2 antibodies prior to perfusion resulted in the functionalised vesicles taking 1.75 to 2.5 times longer to traverse this distance compared to the controls. The data show that our system is able to detect weak as well as strong protein-protein interactions. This system offers researchers a portable, easily operated and customizable platform for the study of weak protein-protein interactions, particularly between membrane proteins.     

A network modelling approach for assessing the efficiency of prevention strategies

Survey data and a simulation model based on a stochastic pair formation process are used to construct networks of sexual contacts. We model heterosexual partnerships which can be steady or casual depending on their average duration. Transmission of an infectious disease can take place in pairs of a susceptible and an infected individual. We study networks of sexual contacts accumulated during 1 year for different types of mixing patterns. The networks are constructed on the basis of data from a survey in The Netherlands. We analyze the network structure for different mixing patterns and investigate the relationship between network structure and disease spread; furthermore we study the effect of prevention measures on the structure of the network.