Intramolecular Dynamics of Tetranuclear Iridium Carbonyl Cluster Compounds. Part III. Crystallographic and dynamic evidence for the intermediate of the ‘merry-go-round’ process in nonacarbonyl-μ3-(1,3,5-trithiane)-tetrairidium

The title complex crystallises in two C_3v, isomeric forms differing in carbonyl-ligand arrangement. In solution, the isomer 1b with three edge-bridging carbonyls on a common face of the metal tetrahedron converts via an endothermic equilibrium into the isomer 1u with no bridging carbonyls. The latter was shown by ¹³C-NMR to be the intermediate of the ‘merry-go-round’ process which exchanges the sites of the basal CO's.     

Unexpected one-pot synthesis of highly conjugated pentacyclic diquinoid compounds

A new class of pentacyclic diquinoid compounds has been synthesized with a facile one-pot reaction of two molecules of 2-hydroxynaphthoquinone and 1-bromoalkanes in the presence of ferrocene. These molecules were isolated as enol tautomers that exhibit intramolecular hydrogen bond and extended electronic conjugation as proved by the intense absorption spectrum with a broad band between 400 and 600 nm. The spectroscopic and electrochemical characterization of this new class of compounds has been performed. One of the synthesized diquinoid derivatives showed a significant cytotoxicity with IC(50) values of 25-50 μM against Cisplatin-Resistant SKOV3 and colon carcinoma SW480 cell lines. The results of our study provide a valuable tool to a one-pot synthesis of highly conjugated polyquinones, analogous to important biological systems, with significant antitumoral activity.     

A variable temperature study of Ru3(CO)12 in the solid state and the generation of alternative crystal structures

Summary The molecular and crystal structure of Ru₃(CO)₁₂ has been reinvestigated on single-crystal X-ray diffraction data collected at 100 and 150 K. Thermal motion analysis on high-order diffraction data have been used to characterize the motion about equilibrium positions of the molecule as a whole and of groups of atoms. It has been shown that, while the molecule undergoes an almost isotropic rigid-body librational and translational motion, the three Ru(CO)₄ units undergo different librational motions about the axes passing between each Ru atom and bisecting the opposite 615-01 bond. Packing potential energy calculations and computer graphics have been used to show that the most favoured packing motif in the experimental crystal is based on interlocking between tetracarbonyl units formed by two pairs of CO ligands at right angles along a 615-02 edge. Starting from the structure of Ru₃(CO)₁₂, alternative crystal arrangements have been generated and compared with the experimental crystal structure in terms of packing efficiency and cohesive energy.     

Dinuclear ruthenium bipyridine complexes with a bis(iminodioxolene)-meta-phenylene ligand: magnetic coupling and mixed valence character of the semiquinonato species

The dinuclear bis-iminosemiquinonato [Ru(bpy)(2)(L)(2)Ru(bpy)(2)](PF(6))(2) complex where L is the deprotonated form of N,N'-bis(3,5-di-tert-butyl-2-hydroxyphenyl)-1,3-phenylenediamine (H(4)L), has been synthesised. For comparison purposes, the mononuclear iminosemiquinonato [Ru(bpy)(2)L']PF(6) formed by the N-phenyl-o-aminophenol (H(2)L') was also investigated. Magnetic investigation evidences that the bis-semiquinonato species is characterised by a moderately strong ferromagnetic interaction (H=JS(1) x S(2), J=-85(5) cm(-1)). This result is the theoretically expected one and it is contrasting with the antiferromagnetic interaction observed in previously investigated complexes containing the same ligand. It is suggested that the different behaviour is determined by the different coordination requirements occurring in these complexes. The spectroelectrochemical analysis provides a clear evidence of the valence trapped character of the mono-semiquinonato forms of the ligand. The two mixed valence semiquinonato species containing the quinonato-semiquinonato and semiquinonato-catecholato bridging ligand can be described as class II, but show a significantly different electronic coupling. The electronic factors determining this behaviour are discussed.     

Intramolecular Dynamics of Five-coordinate iron Carbonyl Complexes with olefinic ligands as studied by variable-pressure 1H-NMR spectroscopy

Variable-pressure ¹H-NMR Spectroscopy has been used to study the fluxionality of some five-coordinated Fe complexes in solution. For [Fe(CO)₂ 1,3-cyclooctadiene (PPh₃)], the CO site exchange is known (by analogy with [Fe(CO)₃(1,3-cyclooctadiene)]) to be a non-dissociative process, and an activation volume of ca. 0 cm³.mol^?1 was indeed obtained. However, for [Fe(CO₂){2,3-η:O-σ-(7,7-dimethoxybicyclo[2.2.1]hept-2-ene)}(PPh₃)], the activation volume of +5 cm³ mol^?1 suggests that an unprecedented dissociation process is responsible for the CO site exchange. The molecular structure of [Fe(CO)₂(1,3-cyclooctadiene)(PPh₃)] was ascertained by single-crystal X-ray diffractometry. The crystals are triclinic, space group P1 , a = 9.606(3), b = 16.795(2), c = 7.743(8) Å, α = 97.83(4), β = 109.63(4), γ = 83.37(2)°. The structure determination has shown that the complex possesses a tetragonal pyramidal coordination, with the endocyclic C?C bond and PPh₃ occupying basal sites.     

Solvent effects on the vibrational activity and photodynamics of the green fluorescent protein chromophore: a quantum-chemical study

Vibrational activities in the Raman and resonance Raman spectra of the cationic, neutral, and anionic forms of 4'-hydroxybenzylidene-2,3-dimethyl-imidazolinone, a model compound for the green fluorescent protein chromophore, have been obtained from quantum-chemical calculations in vacuo and with the inclusion of solvent effects through the polarizable continuum model. It is found that inclusion of solvent effects improves slightly the agreement with experimental data for the cationic and neutral forms, whose spectra are qualitatively well-described already by calculations in vacuo. In contrast, inclusion of solvent effects is crucial to reproduce correctly the activities of the anionic form. The structural effects of solvation are remarkable both in the ground and in the lowest excited state of the anionic chromophore and influence not only the vibrational activity but also the photodynamics of the lowest excited state. CASPT2//CASSCF photoreaction paths, computed by including solvent effects at the CASSCF level, indicate a facile torsional deformation around both exocyclic CC bonds. Rotation around the exocyclic CC double bond is shown to lead to a favored radiationless decay channel, more efficient than that in gas phase, and which explains the ultrafast fluorescence decay and ground-state recovery observed in solution. Conversely, rotation around the exocyclic CC single bond accounts for the bottleneck observed in the ground-state recovery cycle. It is also speculated that the ultrafast radiationless decay channel would be hampered in protein for unfavorable electrostatic interactions and steric reasons.     

Gel-like lyomesophases formed in organic solvents by self-assembled guanine ribbons

Lipophilic guanosine derivatives are self-assembled into ribbonlike aggregates, both in the crystal state and in solution. The structure of the ribbons has been characterised by single-crystal X-ray diffraction and, in solution, by NMR spectroscopy and ESI-MS. Two different ribbons with different patterns of hydrogen bonds are present in the solid state and in chloroform solutions. The gel-like phases obtained in hexadecane, toluene and chloroform have been investigated by optical microscopy and small-angle X-ray diffraction: the type of phase observed is related to the molecular structure of the compounds and depends dramatically on the solvent. The structures of the phases are discussed, with the presence of the two different ribbons being taken into account.     

Synthesis and characterisation of nu3-octahedral [Ni36Pd8(CO)48]6- and [Ni35Pt9(CO)48]6- clusters displaying unexpected surface segregation of Pt atoms and molecular and/or crystal substitutional Ni/Pd and Ni/Pt disorder

The synthesis and structure, as well as the chemical and electrochemical characterisation of two new nu(3)-octahedral bimetallic clusters with the general [Ni(44-x)M(x)(CO)(48)](6-) (M = Pd, x = 8; M = Pt, x = 9) formula is reported. The [Ni(35)Pt(9)(CO)(48)](6-) cluster was obtained in reasonable yields (56 % based on Pt) by reaction of [Ni(6)(CO)(12)](2-) with 1.1 equivalents of Pt(II) complexes, in ethyl acetate or THF as the solvent. The [Ni(36)Pd(8)(CO)(48)](6-) cluster was obtained from the related reaction with Pd(II) salts in THF, and was isolated only in low yields (5-10 % based on Pd), mainly because of insufficient differential solubility of its salts. The unit cell of the [NBu(4)](6)[Ni(35)Pt(9)(CO)(48)] salt contains a substitutionally Ni-Pt disordered [Ni(24)(Ni(14-x)Pt(x))Pt(6)(CO)(48)](6-) (x = 3) hexaanion. A combination of crystal and molecular disorder is necessary to explain the disordering observed for the Ni/Pt sites. The unit cell of the corresponding [Ni(36)Pd(8)(CO)(48)](6-) salt contains two independent [Ni(30)(Ni(8-x)Pd(x))Pd(6)(CO)(48)](6-) (x = 2) hexaanions. The two display similar substitutional Ni-Pd disorder, which probably arises only from crystal disorder. The structure of [Ni(36)Pd(8)(CO)(48)](6-) establishes the first similarity between the chemistry of Ni-Pd and Ni-Pt carbonyl clusters. A comparison of the chemical and electrochemical properties of [Ni(35)Pt(9)(CO)(48)](6-) with those of the related [Ni(38)Pt(6)(CO)(48)](6-) cluster shows that surface colouring of the latter with Pt atoms decreases redox as well as protonation propensity of the cluster. In contrast, substitution of all internal Pt and two surface Ni with Pd atoms preserves the protonation behaviour and is only detrimental with respect to its redox aptitude. A qualitative rationalisation of the different surface-site selectivity of Pt and Pd, based on distinctive interplays of M--M and M--CO bond energies, is suggested.