Optimization and Verification of Droplet Digital PCR Even-Specific Methods for the Quantification of GM Maize DAS1507 and NK603

In recent years, digital polymerase chain reaction (dPCR), a new molecular biology technique, has been gaining in popularity. Among many other applications, this technique can also be used for the detection and quantification of genetically modified organisms (GMOs) in food and feed. It might replace the currently widely used real-time PCR method (qPCR), by overcoming problems related to the PCR inhibition and the requirement of certified reference materials to be used as a calibrant. In theory, validated qPCR methods can be easily transferred to the dPCR platform. However, optimization of the PCR conditions might be necessary. In this study, we report the transfer of two validated qPCR methods for quantification of maize DAS1507 and NK603 events to the droplet dPCR (ddPCR) platform. After some optimization, both methods have been verified according to the guidance of the European Network of GMO Laboratories (ENGL) on analytical method verification (ENGL working group on “Method Verification.” (2011) Verification of Analytical Methods for GMO Testing When Implementing Interlaboratory Validated Methods). Digital PCR methods performed equally or better than the qPCR methods. Optimized ddPCR methods confirm their suitability for GMO determination in food and feed.     

Optimisation of sample pre-treatment method for the determination of triclosan in marine sediments by high-performance liquid chromatography and marine benthic quality assessment in the southern Baltic Sea

This study comprises optimisation of sample preparation and HPLC analytical procedure for the determination of a personal care product ingredient, triclosan (TCS), in marine sediments. The testing of several varying pre-treatment parameters confirmed that ultrasonic extraction is an effective method for the isolation of TCS from marine sediments, and that the choice of extraction solvent appeared to be of major importance. The selection of the mobile-phase composition and the absorption wavelength was made for the high-performance liquid chromatography analysis step. Based on the validated method, a preliminary assessment of the benthic ecosystem quality with regards to TCS contamination has been demonstrated in the southern Baltic Sea – a semi-enclosed sea, characterised by poor water exchange, thus particularly susceptible to anthropopression. TCS has been identified and quantified in situ in marine bottom sediments, sediment dwelling isopod – Saduria entomon L. and estimated in silico in pore waters based on the equilibrium partition theory in order to assess the potential exposure and uptake from the aqueous phase. TCS concentrations identified in the bottom sediments of the Gdansk Basin, as the natural habitat for studied S.entomon L., appear to be threatening to the benthic environment. Particularly when considering S. entomon L. as a major nutrition source for cod (Gadus morhua) undergoing the feminisation process, since the recent studies prove TCS to have a potential to induce critical alterations in the endocrine system of marine ichthyofauna.     

Hydrodynamics and mass transfer coefficients for a modified Raschig ring packed column

The pressure drop, the liquid holdup, as well as the liquid film mass transfer coefficients (k_L) for a modified Raschig packing, with turbulence promoters, used in absorption columns, were determined experimentally. The aim of this work is to verify the improved mass transfer properties of this new packing for the randomly and, particularly, for the arranged packed columns. The experiments were performed at gas velocities ranging from 800 to 2,000 m h^?1 and liquid velocities scaling between 2.5 and 8.11 m h^?1, ranges that cover most of the absorption column operation conditions. Experimental data and correlations for the pressure drop, the liquid holdup and the gas–liquid mass transfer coefficients (k_L) for modified Raschig ring packed columns are presented. The influence of the gas and the liquid velocities on the column hydrodynamics and the mass transfer coefficients have been obtained experimentally and also, have been compared with literature data.     

Reversible adsorption of spherical particles from binary mixtures: long-time behaviour

Formation of monolayers of spherical particles in processes with reversible adsorption from mixtures of large and small particles was simulated in computer experiments. Computer program was based on an algorithm that took into account random sequential adsorption, desorption and lateral diffusion of adsorbed particles (RSA–DLD model). Computer experiments were performed for systems with rate constants of particle adsorption at least 10³ times higher than rate constants of desorption. In processes with very fast adsorption and slow desorption, formation of monolayer can be divided into two stages. During the first stage, the total surface coverage (the coverage with particles of both types) increases very fast and becomes very close to that at equilibrium. During the second stage, the total coverage changes very slowly and the system approaches equilibrium mainly by the replacement of large particles with the small ones. A simple kinetic model for evolution of the monolayer composition during the second stage has been proposed. Kinetic equations related to this model allow the determination of large particles’ desorption rate constants on the basis of changes in the surface concentrations of adsorbed large and small microspheres. The validity of the model has been tested comparing large particles’ desorption rate constants values that had been used for simulations with values of the corresponding rate constants determined using analytical equations, with a view to analysing the simulation results. To cite this article: S. Slomkowski et al., C. R. Chimie 6 (2003).     

Resistance of Cu(Aβ4–16) to Copper Capture by Metallothionein‐3 Supports a Function for the Aβ4–42 Peptide as a Synaptic CuII Scavenger

Aβ4‐42 is a major species of Aβ peptide in the brains of both healthy individuals and those affected by Alzheimer's disease. It has recently been demonstrated to bind Cu^II with an affinity approximately 3000 times higher than the commonly studied Aβ1‐42 and Aβ1‐40 peptides, which are implicated in the pathogenesis of Alzheimer's disease. Metallothionein‐3, a protein considered to orchestrate copper and zinc metabolism in the brain and provide antioxidant protection, was shown to extract Cu^II from Aβ1‐40 when acting in its native Zn₇MT‐3 form. This reaction is assumed to underlie the neuroprotective effect of Zn₇MT‐3 against Aβ toxicity. In this work, we used the truncated model peptides Aβ1‐16 and Aβ4‐16 to demonstrate that the high‐affinity Cu^II complex of Aβ4‐16 is resistant to Zn₇MT‐3 reactivity. This indicates that the analogous complex of the full‐length peptide Cu(Aβ4‐42) will not yield copper to MT‐3 in the brain, thus supporting the concept of a physiological role for Aβ4‐42 as a Cu^II scavenger in the synaptic cleft.     

Photoreduction of Terrigenous Fe‐Humic Substances Leads to Bioavailable Iron in Oceans

Humic substances (HS) are important iron chelators responsible for the transport of iron from freshwater systems to the open sea, where iron is essential for marine organisms. Evidence suggests that iron complexed to HS comprises the bulk of the iron ligand pool in near‐coastal waters and shelf seas. River‐derived HS have been investigated to study their transport to, and dwell in oceanic waters. A library of iron model compounds and river‐derived Fe‐HS samples were probed in a combined X‐ray absorption spectroscopy (XAS) and valence‐to‐core X‐ray emission spectroscopy (VtC‐XES) study at the Fe K‐edge. The analyses performed revealed that iron complexation in HS samples is only dependent on oxygen‐containing HS functional groups, such as carboxyl and phenol. The photoreduction mechanism of Fe^III‐HS in oceanic conditions into bioavailable aquatic Fe^II forms, highlights the importance of river‐derived HS as an iron source for marine organisms. Consequently, such mechanisms are a vital component of the upper‐ocean iron biogeochemistry cycle.     

Determination of Fluoroquinolones in Animal Feed by Ion Pair High-performance Liquid Chromatography with Fluorescence Detection

A sensitive and simple method is described for the determination of fluoroquinolones by high-performance liquid chromatography (HPLC) using a C18 column and fluorescence detection. The mobile phase was acetonitrile and 0.025M phosphate acid with 0.0025M sodium 1-heptanesulfonate monohydrate in water with a gradient program. The chromatographic conditions were optimized for the determination of ciprofloxacin, enrofloxacin, sarafloxacin, and flumequine in animal feed. The samples were extracted by a hydrochloric acid and acetonitrile followed by dilution in 0.01M oxalic acid at pH 4.0 and purified by solid-phase extraction. The procedure was validated by fortifying feed at 200, 1000, and 2000?µg/kg. The limits of detection and quantification were from 28.5 to 74.7 and 31.7 to 94.6?µg/kg, respectively. The average recoveries for fluoroquinolones were from 89.7 to 100.3%. The method was validated and shown to be efficient and precise for quantification of fluoroquinolones in animal feed. The results demonstrate the feasibility of the method for routine use to monitor these substances in feed.     

A DFT study of uranyl hydroxyl complexes: structure and stability of trimers and tetramers

A DFT study of U(VI) hydroxy complexes was performed with special attention paid to the [(UO₂)₃(OH)₅(H₂O)_4–7]⁺ and [(UO₂)₄(OH)₇(H₂O)_5–8]⁺ species. It was established that the ionicity of the U=O bond increased when moving from [(UO₂)(H₂O)₅]²⁺, [(UO₂)₂(OH)(H₂O)₈]³⁺, [(UO₂)₂(OH)₂(H₂O)₆]²⁺, [(UO₂)₃(OH)₅(H₂O)_4–6]⁺ to [(UO₂)₄(OH)₇(H₂O)_5–8]⁺ species. In both [(UO₂)₃(OH)₅(H₂O)_4–6]⁺ and [(UO₂)₄(OH)₇(H₂O)_5–8]⁺ complexes, the U=O bond was observed to have a range of different lengths which depended on the composition of the first coordination sphere of UO₂ ²⁺. The cyclic structures of trimeric complexes were somewhat more stable than their linear structures, which was probably due to the steric effect.

     

Occurrence and Determination of Carotenoids and Polyphenols in Different Paprika Powders from Organic and Conventional Production

Paprika powder is a good source of different carotenoids and polyphenols, which play a key role in preventing certain diseases (some kinds of cancer and cardiovascular diseases). They can also be used as natural food colorants. Organic production is characterized by strict rules, but products obtained in this way contain more bioactive compounds, such as carotenoids and polyphenols. The aim of this study was to measure and identify carotenoids and polyphenols in different paprika samples (sweet, hot, smoked, and chili) obtained by organic and conventional production. Quantitative and qualitative carotenoid and polyphenols analysis showed that the experimental samples contained different concentrations of these compounds.     

Red Horse Chestnut and Horse Chestnut Flowers and Leaves: A Potential and Powerful Source of Polyphenols with High Antioxidant Capacity

Aesculus flowers and leaves are an excellent source of bioactive compounds, including flavanols, phenolic acids, and anthocyanins, and the leaves also contain antioxidant carotenoids and chlorophylls. The aim of this study was to analyse and compare the amounts of bioactive compounds present in Aesculus hippocastanum and Aesculus × carnea flowers and leaves over two years. These two species from six independent locations (parks and green areas) located in Warsaw were assessed in this study. The dry matter by the scale method and polyphenol, carotenoid, and chlorophyll content by the HPLC method of the flowers and leaves was evaluated. Red horse chestnut flowers contained significantly more total carotenoids (40.6 µg/g FW) and chlorophylls (36.9 µg/g FW) than horse chestnut flowers, and red horse chestnut flowers contained higher levels of anthocyanins (5.41 µg/g FW) than other species. We observed that horse chestnut flowers were characterized by a higher total polyphenols concentration (9.45 µg/g FW) compared to red horse chestnut flowers. In addition, the analysis of leaves showed that all quality parameters were higher in red horse chestnut species. Five individual anthocyanins were identified in both species’ flowers, but a higher concentration was found in red horse chestnut flowers, and pelargonidin-3-O-glucoside was the predominant form among a pool of total anthocyanins. In both experimental years, leaves (109.25 mMol/100 g FW and 112.0 mMol/100 g FW) were characterized by a higher antioxidant activity than flowers (27.0 mMol/100 g FW and 27.5 mMol/100 g FW).