Performance and selectivity of polymeric pseudostationary phases for the electrokinetic separation of amino acid derivatives and peptides

Two polymeric pseudostationary phases, one an acrylamide polymer and the second a siloxane polymer, have been investigated for the separation of naphthalene-2,3-dicarboxaldehyde (NDA)-derivatized amino acids and small peptides. The dervatized amino acids were detected by UV absorbance and laser-induced fluorescence (LIF) detection. The polymers provided very high efficiency and good selectivity for the separation of the amino acids. The separation selectivity using the polymers was significantly different from that of SDS micelles, and there were subtle differences in selectivities between the polymers. Although very good detection limits were obtained with LIF detection, a significant background signal was observed when the polymers were not washed to remove fluorescent impurities. The polymers did not separate the peptides very well. It is postulated that the fixed covalent structure of the polymers prevents them from interacting strongly or efficiently with the peptides, which are large in relation to the analytes typically separated by electrokinetic chromatography using polymers.     

A two-state model for selective solubilization of benzene-limonene mixtures in sodium dihexyl sulfosuccinate microemulsions

When surfactants are used to solubilize oil, the oil to be solubilized is often a mixture of components with differing properties, for example, solubilization of drug molecules in microemulsion formulations, remediation of organic polluted aquifers using surfactants, and so forth. Previous research has demonstrated that selective solubilization of one organic component over the other may occur if the organic components are dissimilar. In this research, we investigated selective solubilization from benzene-limonene mixtures in Winsor type I and III microemulsion systems containing water, sodium di-n-hexyl sulfosuccinate, and NaCl. The effect of the oil phase composition and the electrolyte concentration on the selectivity was studied. It was found that the selectivity toward benzene was highest at low electrolyte and benzene concentrations, decreasing as the electrolyte or benzene concentration increased. The results are discussed on the basis of the two-state solubilization theory and by correlating the curvature of the surfactant film in the microemulsion with changes of the electrolyte concentration and the oil phase composition. A simple mathematical model is developed for the selectivity, which combines the two-state solubilization theory and the net-average curvature model of microemulsion solubilization to yield close agreement with the experimental data.     

Sn-containing liquid crystalline side group homopolymers with two glass transitions

Three homologous tin-containing homopolymers with a terminal CN-dipole in the side group have been synthesized and characterized by dynamical calorimetry, polarization microscopy, X-ray and dielectric methods. AFM was used to evaluate the texture at room temperature. Four different phase transitions were detected by DSC. The high temperature phases were identified by polarization microscopy as SmA and SmC. AFM-measurements show focal-conic domains at room temperature and confirm so the smectic nature of all phases. X-ray measurements on nonoriented samples give hints to a phase segregation on nanometer scale. Dielectric investigation and temperature-modulated DSC (TMDSC) confirm clearly phase separation by appearance of two glass transitions related to the liquid order of the main chains and the liquid crystalline of the side groups.     

Self-assembly of a hexagonal phase of wormlike micelles containing metal nanoclusters

Stable nanoclusters (approximately 2 nm in diameter) of copper, silver, gold, palladium, and ruthenium coated with hydrophobic coronas are easily trapped in self-assembled "soft crystal" hexagonal phase gels made of water and surfactants. The system's crystal structure and phase behavior are studied in detail. A partial phase diagram showing the hexagonal phase region for the water/SDS/toluene region is presented. High-energy X-ray scattering and cross-polarized optical microscopy experiments show that the clusters are tightly confined within the tubes. The thermal gel-fluid transitions of the hexagonal phase are investigated, and it is shown that the hexagonal phase can melt and recrystallize repeatedly. The melt/gel cycles enable easy trapping of various metal clusters in pre-prepared hexagonal phases. In contrast to spherical micelles, the hexagonal phase doped with metal clusters can grow without limit, basically up to the container walls (Ru-doped soft crystals grew to 0.5 mm over 2 months, forming wormlike tubes that are more than 50 microm long but only 7-10 nm in diameter).     

Conversions of Nitroalkyl to Carbonyl Groups in Carbohydrates

Summary.  Since the development of the Sowden methodology in the middle of the twentieth century, several other efficient and complementary methods for the transformation of sugar nitromethyl groups to aldehyde functionalities in their free, hemiacetal, or otherwise derivatized forms have been developed. Hydrogen peroxide oxidation as well as ozonolysis of 1-deoxyalditol-1-nitronates in aqueous solution provide free aldoses, thus presenting alternatives to the well-known Nef reaction. When applied to 2,5- or 2,6-anhydro-1-deoxy-1-nitroalditols, also known also as glycosylnitromethanes, the Nef reaction fails, and the hydrogen peroxide oxidation overoxidizes the expected products to 2,5- or 2,6-anhydroaldonic acids. On the other hand, the ozonolysis of such compounds under pH-controlled conditions results in up to 85% of the interesting glycosylformaldehydes. The Nef reaction carried out in anhydrous low alcohols, however, has revealed a new conversion of glycosylnitromethanes to glycosylmethanal dialkyl acetals, even more interesting C-glycoside synthons. A similar acid-catalyzed methanolysis of 1-deoxyalditol-1-nitronates leads to methyl furanosides. Finally, a treatment of per-O-substituted glycosylnitromethanes with tributyltin hydride in boiling benzene causes their radical reduction under a nearly quantitative formation of glycosylmethanal oximes. Received November 12, 2001. Accepted November 20, 2001     

Characterization and dioxygen reactivity of a new series of coordinatively unsaturated thiolate-ligated manganese(II) complexes

The synthesis, structural, and spectroscopic characterization of four new coordinatively unsaturated mononuclear thiolate-ligated manganese(II) complexes ([Mn(II)(S(Me2)N(4)(6-Me-DPEN))](BF(4)) (1), [Mn(II)(S(Me2)N(4)(6-Me-DPPN))](BPh(4))·MeCN (3), [Mn(II)(S(Me2)N(4)(2-QuinoPN))](PF(6))·MeCN·Et(2)O (4), and [Mn(II)(S(Me2)N(4)(6-H-DPEN)(MeOH)](BPh(4)) (5)) is described, along with their magnetic, redox, and reactivity properties. These complexes are structurally related to recently reported [Mn(II)(S(Me2)N(4)(2-QuinoEN))](PF(6)) (2) (Coggins, M. K.; Kovacs, J. A. J. Am. Chem. Soc.2011, 133, 12470). Dioxygen addition to complexes 1-5 is shown to result in the formation of five new rare examples of Mn(III) dimers containing a single, unsupported oxo bridge: [Mn(III)(S(Me2)N(4)(6-Me-DPEN)](2)-(μ-O)(BF(4))(2)·2MeOH (6), [Mn(III)(S(Me2)N(4)(QuinoEN)](2)-(μ-O)(PF(6))(2)·Et(2)O (7), [Mn(III)(S(Me2)N(4)(6-Me-DPPN)](2)-(μ-O)(BPh(4))(2) (8), [Mn(III)(S(Me2)N(4)(QuinoPN)](2)-(μ-O)(BPh(4))(2) (9), and [Mn(III)(S(Me2)N(4)(6-H-DPEN)](2)-(μ-O)(PF(6))(2)·2MeCN (10). Labeling studies show that the oxo atom is derived from (18)O(2). Ligand modifications, involving either the insertion of a methylene into the backbone or the placement of an ortho substituent on the N-heterocyclic amine, are shown to noticeably modulate the magnetic and reactivity properties. Fits to solid-state magnetic susceptibility data show that the Mn(III) ions of μ-oxo dimers 6-10 are moderately antiferromagnetically coupled, with coupling constants (2J) that fall within the expected range. Metastable intermediates, which ultimately convert to μ-oxo bridged 6 and 7, are observed in low-temperature reactions between 1 and 2 and dioxygen. Complexes 3-5, on the other hand, do not form observable intermediates, thus illustrating the effect that relatively minor ligand modifications have upon the stability of metastable dioxygen-derived species.     

Novel strategies for isolation and characterization of cyclotides: the discovery of bioactive macrocyclic plant polypeptides in the Violaceae

This review focuses on the discovery of cyclotides in the Violaceae, their isolation and their anti-cancer effects. These macrocyclic plant peptides consist of about 30 amino acids, including three conserved disulfide bonds in a cystine knotted arrangement, which renders them a remarkable stability. Their unique structure, combined with a wide array of biological activities, makes them of great interest as possible leads in drug development or as carriers of grafted peptide sequences. Here we describe the work conducted in our laboratory, which started with the overall aim of identifying peptides and small proteins of the size 10-50 amino acid residues in plants with novel chemical structures and biological profiles with a potential for drug development or for use as pharmacological tools. Thus we developed a fractionation protocol to directly address major challenges encountered when dealing with plant material, such as removal of chlorophyll, polyphenols, and low molecular compounds omnipresent in plants. Using this protocol, we then discovered a suite of cyclotides, the varv peptides, from the plant Viola arvensis (Violaceae). Following this, separation methods directly targeting cyclotides were developed, e.g. by adsorption, ion exchange chromatography and solvent-solvent partitioning, which then were used in the isolation of additional cyclotides. To structurally examine cyclotides we have also developed methods based on mass spectrometry for cyclotide sequencing and mapping of disulfide bonds. Finally, to assess structure-activity relationships, regarding their anti-cancer and cytotoxic effects that we focus upon, we have also characterized the three dimensional structure of cyclotides by homology modeling techniques.     

Glyphosate and glufosinate detection at electrogenerated NiAl-LDH thin films

An amperometric sensor based on Ni_1−xAl_x(OH)₂NO_3x·nH₂O layered double hydroxide (LDH) has been developed for the electrochemical analysis in one step of two herbicides: glyphosate (N-(phosphonomethyl)glycine, Glyp) and glufosinate ((DL-homoalanine-4-yl)-methylphosphinic acid, Gluf). NiAl-LDH was prepared by coprecipitation or by electrodeposition at the Pt electrode surface. Inorganic films were fully characterized by X-ray diffraction, Raman spectroscopy and scanning electron microscopy. Adsorption isotherms of Glyp onto this inorganic lamellar material have been established. Electrocatalytic oxidation of Glyp and Gluf is possible at the Ni³⁺ centres of the structure. The electrochemical responses of the NiAl-LDH modified electrode were obtained by cyclic voltammetry and chronoamperometry at 0.49 V/SCE as a function of herbicide concentration in 0.1 M NaOH solution. The electrocatalytic response showed a linear dependence on the Glyp concentration ranging between 0.01 and 0.9 mM with a detection limit of 1 μM and sensitivity 287 mA/M cm². The sensitivity found for Gluf was lower (178 mA/M cm²).     

Application of external micro-spectrophotometric detection to improve sensitivity on microchips

The goal of this work was to increase the sensitivity of a UV–Vis spectrophotometer by decreasing the background noise and lengthening the optical path. A microphotometer has been modified to precisely select very small parts of a microfluidic channel pattern of a chip and to measure light absorbance on a magnified area of the selected part of the channel. The viability of combining a projection microscope and a spectrophotometer for external absorbance measurements on disposable PDMS chips was studied. Besides the external direct detection above a microfluidic channel, the optical pathlength was lengthened by detecting in the region of the perpendicular exit port. Increasing the cross-sectional area of the zone of irradiation improved the signal-to-noise ratio and the limits of detection (LOD).     

Infrared action spectroscopy of the OD stretch fundamental and overtone transitions of the DOOO radical

The DOOO radical has been produced by three-body association between OD and O2 in a supersonic free-jet expansion and investigated using action spectroscopy, an IR-UV double-resonance technique. Partially rotationally structured bands observed at 2635.06 and 5182.42 cm(-1) are assigned to the OD stretch fundamental (nu(OD)) and overtone (2nu(OD)), respectively, of the trans-DOOO radical. Unstructured bands observed in both spectral regions are assigned to cis-DOOO. Nascent OD X(2)Pi product state distributions following vibrational predissociation appear to be nearly statistical with respect to the degree of rotational excitation, but display a marked propensity for Pi(A') Lambda-doublets, which is interpreted as a signature of a planar dissociation. The energetically highest open OD X(2)Pi product channel implies an upper limit dissociation energy D0 < or = 1856 cm(-1) or 5.31 kcal mol(-1). This value allows refinement of the upper limit D0 of the atmospherically important HOOO isotopomer, suggesting that it is marginally less stable than previously thought.