Mechanistic Studies of the Photolysis of Phosphonium Salts

Abstract

As part of our continuing interest in the mechanistic photochemistry of phosphonium salts (Toscano et al., Chez. Commun., 567 (1973); J. Phys. Chem., 83(9), 1213 (1979)) we have investigated the photodecomposition (313 nm irradiation) of (1-naphthyl-methyl) triphenylphosphonium (I) chloride and tetrafluoroborate in deaerated isopropanol:     

Dissociation of Multisubunit Protein–Ligand Complexes in the Gas Phase. Evidence for Ligand Migration

The results of collision-induced dissociation (CID) experiments performed on gaseous protonated and deprotonated ions of complexes of cholera toxin B subunit homopentamer (CTB₅) with the pentasaccharide (β-D-Galp-(1→3)-β-D-GalpNAc-(1→4)[α-D-Neu5Ac-(2→3)]-β-D-Galp-(1→4)-β-D-Glcp (GM1)) and corresponding glycosphingolipid (β-D-Galp-(1→3)-β-D-GalpNAc-(1→4)[α-D-Neu5Ac-(2→3)]-β-D-Galp-(1→4)-β-D-Glcp-Cer (GM1-Cer)) ligands, and the homotetramer streptavidin (S₄) with biotin (B) and 1,2-dipalmitoyl-sn-glycero-3-phosphoethanolamine-N-(biotinyl) (Btl), are reported. The protonated (CTB₅ + 5GM1)ⁿ⁺ ions dissociated predominantly by the loss of a single subunit, with the concomitant migration of ligand to another subunit. The simultaneous loss of ligand and subunit was observed as a minor pathway. In contrast, the deprotonated (CTB₅ + 5GM1)^n- ions dissociated preferentially by the loss of deprotonated ligand; the loss of ligand-bound and ligand-free subunit were minor pathways. The presence of ceramide (Cer) promoted ligand migration and the loss of subunit. The main dissociation pathway for the protonated and deprotonated (S₄ + 4B)^n+/– ions, as well as for deprotonated (S₄ + 4Btl)^n– ions, was loss of the ligand. However, subunit loss from the (S₄ + 4B)ⁿ⁺ ions was observed as a minor pathway. The (S₄ + 4Btl)ⁿ⁺ ions dissociated predominantly by the loss of free and ligand-bound subunit. The charge state of the complex and the collision energy were found to have little effect on the relative contribution of the different dissociation channels. Thermally-driven ligand migration between subunits was captured in the results of molecular dynamics simulations performed on protonated (CTB₅ + 5GM1)¹⁵⁺ ions (with a range of charge configurations) at 800 K. Notably, the migration pathway was found to be highly dependent on the charge configuration of the ion. The main conclusion of this study is that the dissociation pathways of multisubunit protein–ligand complexes in the gas phase depend, not only on the native topology of the complex, but also on structural changes that occur upon collisional activation.

The Structure of a Non-Symmetric Disordered Tetramer: A Crystallographic and Solid State Multinuclear NMR Study of the Properties of 3(5)-Ethyl-5(3)-Phenyl-1H-Pyrazole

The X-ray structure and the solid-state NMR measurements, mainly ¹⁵N CPMAS of the labelled compound, allow to determine the static and dynamic properties of 3(5)-ethyl-5(3)-phenyl-1H-pyrazole. The compound is a tetramer formed by three 5-ethyl-3-phenyl-1H-pyrazole and one 3-ethyl-5-phenyl-1H-pyrazole tautomers in dynamic equilibrium with the complementary situation.     

Calorimetric, conductometric and density measurements of iteratively filtered water using 450, 200, 100 and 25 nm Millipore filters

This study presents some experimental results on the variation of the physico-chemical properties of pure MilliQ water, when subjected to a procedure of iterated filtration through Millipore filters with porosity ranging from 450 to 25 nm. The parameters measured were: calorimetry, electrical conductivity, density, and pH. Release of chemical impurities can be ruled out due to the nature of the materials used. As in the case of iteratively filtered water prepared using Pyrex glass filters, the specific electrical conductivity and the pH were found to increase with increasing number of iterations. There was also a dependence on the average pore size of the filters. The idea of water as a system capable of self-organization triggered by various perturbations (mechanical and/or electromagnetic) is gaining momentum. It responds to such perturbations by forming dissipative structures, i.e., far-from-equilibrium systems.     

PEDOT-supported Pd nanoparticles as a catalyst for hydrazine oxidation

Composite poly-3,4-ethylenedioxythiophene (PEDOT)/palladium (Pd) films were obtained by chemical deposition of dispersed palladium nanoparticles into PEDOT conducting polymer matrix. The amounts of palladium particles incorporated into PEDOT films were estimated by electrochemical quartz crystal microbalance measurements. It was shown that palladium loading depends on the time a PEDOT film is exposed in the solution, containing Pd(II)-ions, on the concentration of Pd(II) ions and the film thickness. X-ray photoelectron spectroscopy data have confirmed the presence of metallic palladium in the polymer. The morphology of pristine and composite films as well as the size of Pd nanoparticles and their distribution were characterized using scanning electron microscopy (SEM) and transmission electron microscopy (TEM). From SEM images, it was found that Pd particles decorated PEDOT globular structures as quasi-spherical particles, and their mean size was dependent on synthesis conditions. The nanoparticles were non-uniformly dispersed on the polymer surface. The comparison of TEM images of composite PEDOT/Pd films obtained for different times of metal loading was made. The remarkable effect of loading time on the size of particles has been established: the mean size of dominating palladium particles was close to 6–10 nm for 30 s of metal deposition, and it was getting larger with the increase of deposition time (close to 15–30 nm for 120 s). It is most likely that with prolongation of synthesis time, the deposition of palladium predominantly proceeds on the already deposited palladium clusters, resulting in the extension growth of their size. Catalytic properties of PEDOT/Pd composite films were studied in respect to hydrazine oxidation by cyclic voltammetry and voltammetry on rotating disk electrode. The obtained data allow to conclude that the process of hydrazine oxidation on PEDOT/Pd composites takes place predominantly on palladium particles, located on the surface or in the near-surface layers of the polymer. The diffusion nature of the limiting current of hydrazine oxidation on composite PEDOT/Pd film in phosphate buffer solution рН = 6.86 was confirmed, and hydrazine diffusion coefficient was calculated. The increase of the limiting currents of hydrazine oxidation with the increase of Pd deposition time was observed, resulting from the increase of the active surface area of palladium particles, acting as microelectrodes. The electroanalytical applications of these nanocomposite materials for the determination of hydrazine were demonstrated.     

Electroanalysis of single-nucleotide polymorphism by hairpin DNA architectures

Genetic analysis of infectious and genetic diseases and cancer diagnostics require the development of efficient tools for fast and reliable analysis of single-nucleotide polymorphism (SNP) in targeted DNA and RNA sequences often responsible for signalling disease onset. Here, we highlight the main trends in the development of electrochemical genosensors for sensitive and selective detection of SNP that are based on hairpin DNA architectures exhibiting better SNP recognition properties compared with linear DNA probes. SNP detection by electrochemical hairpin DNA beacons is discussed, and comparative analysis of the existing SNP sensing strategies based on enzymatic and nanoparticle signal amplification schemes is presented.     

Improved Synthesis of Tricyclo (5.2.1.04,10) Decane-2,5,8-Trione by a Pauson-Khand Intramolecular Bis-Annulation

The title compound 1 has been synthesized from diol 3a, either directly or after protection of the two hydroxy groups as benzyl ethers, by an intramolecular Pauson-Khand bis-annulation, followed by catalytic hydrogenation and oxidation in overall yields ranging from 15% (free diol) to 35% (dibenzyl ethers).     

Solvent‐Free Iodination of Arenes using Iodine–Silver Nitrate Combination

A simple and environmentally safe general method of iodination of aromatic substrates under sovent‐free conditions using the I₂/AgNO₃ combination in a solid state is reported. Both activated and deactivated aromatic compounds afford the respective aryl iodides in generally high yields (80–90%).     

Chestnut Shell as Unexploited Source of Fermentable Sugars: Effect of Different Pretreatment Methods on Enzymatic Saccharification

Chestnut shell (CS) is an agronomic residue mainly used for extraction of antioxidants or as adsorbent of metal ions. It also contains some polysaccharide that has not been considered as potential source of fermentable sugars for biofuel production until now. In this study, the effect of different pretreatment methods on CS was evaluated in order to obtain the greatest conversion of cellulose and xylan into fermentable sugars. Hot acid impregnation, steam explosion (acid-catalysed or not), and aqueous ammonia soaking (AAS) were selected as pretreatments. The pretreated biomass was subjected to saccharification with two enzyme cocktails prepared from commercial preparations, and evaluation of the best pretreatment and enzyme cocktail was based on the yield of fermentable sugars produced. As AAS provided the best result after preliminary experiments, enhancement of sugar production was attempted by changing the concentrations of ammonium hydroxide, enzymes, and CS. The optimal pretreatment condition was 10 % ammonium hydroxide, 70 °C, 22 h with CS at 5 % solid loading. After saccharification of the pretreated CS for 72 h at 50 °C and pH 5.0 with a cocktail containing cellulase (Accellerase 1500), beta-glucosidase (Accellerase BG), and xylanase (Accellerase XY), glucose and xylose yields were 67.8 and 92.7 %, respectively.