External magnetic field-dependent tricritical points of uniaxial-to-biaxial nematic transition

External magnetic field-dependent behavior of tricritical points of uniaxial–biaxial nematic phase transition in a mixture of prolate and oblate molecules has been studied using the Landau phenomenological theory. Topological classification of phase diagrams in the field-temperature coordinates is performed using a sixth-order term in order parameter tensor. For both prolate and oblate molecules, the tricritical order parameters corresponding to the uniaxial–biaxial increase with the intensity of the external magnetic field. Field-induced paranematic phase has only been reported for prolate molecules, but for oblate molecules, field-induced splitting of the order parameter has been reported.     

Gas-phase mechanisms of degradation of hazardous organophosphorus compounds: do they follow a common pattern of alkaline hydrolysis reaction as in phosphotriesterase?

A comprehensive ab initio analysis of the gas-phase mechanisms of alkaline hydrolysis for a number of phosphotriesterase substrates--O,O-diisopropyl phosphorofluoridate (DFP), O-isopropyl methyl phosphonofluoridate, O,O-diethyl p-nitrophenyl phosphate (paraoxon), O,O-diethyl p-nitrophenyl thiophosphate (parathion), N-acetyl phosphoramidothioate (acephate), O,O-diethyl S-2-ethylthioethyl phosphorothioate (demeton-S) and O-ethyl N,N-dimethyl phosphoramidocyanidate--has been presented herein. The results indicate that, although an associative mechanism of alkaline hydrolysis is followed by all these compounds, P-F and P-CN bonds are cleaved according to the multistep addition-elimination scheme, whereas the breakage of P-O and P-S bonds appears to be consistent with the one-step direct-displacement mechanism. Of the two alternative reaction pathways present in all those cases (except of acephate), the most probable one involves the proton from a nucleophilic hydroxide experiencing an additional stabilization by the phosphoryl oxygen atom.     

Quantitative classification of covalent and noncovalent H-bonds

The covalent nature of interactions within various hydrogen bonded molecular aggregates has been characterized by the two entirely different computational methods: Bader analysis of the electron density and variation-perturbation partitioning of the intermolecular interaction energy. Analysis of 34 complexes representing different types of hydrogen bonds indicates that the proton-acceptor distance approximately 1.8 A and the ratio of delocalization and electrostatic terms approximately 0.45 constitutes approximately a borderline between covalent and noncovalent hydrogen bonds. The latter ratio could be used to characterize quantitatively the degree of the covalent nature of transition state interactions with active site residues, a quantity essential for an enzyme catalytic activity.     

Polymer - supported cobalt (II) catalysts for the oxidation of alkenes

Polymer-supported heterogeneous catalysts in a form of complexes of 8-hydroxy- quinoline with cobalt acetate were synthesized. Conjugated polymers - polyaniline (PANI), poly-o-toluidine (POT), poly-o-anisidine (POA) - were used as supports. Oxidation reactions of aliphatic and aromatic hydrocarbons were carried out in the presence of molecular oxygen at atmospheric pressure and epoxides or ketones were obtained as the main products with high selectivity.     

Adsorption of neurotensin‐family peptides on SERS‐active Ag substrates

Kinetensin (KN) and its amino acids 1–8 fragment ([des‐Leu⁹]KN), neuromedin N (NMN), and xenopsin (XP) and its two analogs (XP‐1 and XP‐2) belong to the neurotensin family of peptides and are known to stimulate the growth of human tumors. In this work, we report Fourier transform‐Raman and surface‐enhanced Raman scattering (SERS) studies of these peptides and discuss their structures, orientation, and mode of adsorption onto a highly specific, electrochemically roughened SERS‐active Ag electrode that is characterized by the formation of a 50–150 nm Ag island on its surface. We show that the investigated peptides bind preferentially to this surface by substantial electronic overlap between the metal surface and the π‐orbitals of the benzene rings of the Phe, Tyr, and Trp residues, which forces them to take parallel or almost parallel orientations with respect to the surface. In addition, the –CH₂–, –CNH₂, and –COO^‐ molecular fragments are involved in interactions with (binding to or in close proximity with) the Ag surface. The SERS data show that the adsorption modes in each of these cases are very similar. In addition, we show that the specific differences in the amino acid sequences do not significantly affect the orientation of the investigated peptides on the Ag substrate. This result implies that the N‐termini of the neurotensin‐family peptides do not influence the mode for adsorption onto the Ag substrates. Copyright © 2012 John Wiley & Sons, Ltd.     

N-Phenacyldibromobenzimidazoles—Synthesis Optimization and Evaluation of Their Cytotoxic Activity

Antifungal N-phenacyl derivatives of 4,6- and 5,6-dibromobenzimidazoles are interesting substrates in the synthesis of new antimycotics. Unfortunately, their application is limited by the low synthesis yields and time-consuming separation procedure. In this paper, we present the optimization of the synthesis conditions and purification methods of N-phenacyldibromobenzimidazoles. The reactions were carried out in various base solvent-systems including K₂CO₃, NaH, KOH, t-BuOK, MeONa, NaHCO₃, Et₃N, Cs₂CO₃, DBU, DIPEA, or DABCO as a base, and MeCN, DMF, THF, DMSO, or dioxane as a solvent. The progress of the reaction was monitored using HPLC analysis. The best results were reached when the reactions were carried out in an NaHCO₃–MeCN system at reflux for 24 h. Additionally, the cytotoxic activity of the synthesized compounds against MCF-7 (breast adenocarcinoma), A-549 (lung adenocarcinoma), CCRF-CEM (acute lymphoblastic leukemia), and MRC-5 (normal lung fibroblasts) was evaluated. We observed that the studied cell lines differed in sensitivity to the tested compounds with MCF-7 cells being the most sensitive, while A-549 cells were the least sensitive. Moreover, the cytotoxicity of the tested derivatives towards CCRF-CEM cells increased with the number of chlorine or fluorine substituents. Furthermore, some of the active compounds, i.e., 2-(5,6-dibromo-1H-benzimidazol-1-yl)-1-(3,4-dichlorophenyl)ethanone (4f), 2-(4,6-dibromo-1H-benzimidazol-1-yl)-1-(2,4,6-trichlorophenyl)ethanone (5g), and 2-(4,6-dibromo-1H-benzimidazol-1-yl)-1-(2,4,6-trifluorophenyl)ethanone (5j) demonstrated pro-apoptotic properties against leukemic cells with derivative 5g being the most effective.     

Percolation in Two‐Dimensional Copolymer Systems

The aim of the study is the investigation of the percolation phenomena in some model copolymer systems. Diblock, triblock, random copolymers, and a blend of homopolymers are studied. For this purpose, we developed an idealized model of polymeric systems. The positions of polymer segments are restricted to vertices of a simple cubic lattice. The chains are at good solvent conditions – the excluded volume is the only interaction between the segments of the chain. The properties of the model chains are determined by means of Monte Carlo simulations with a sampling algorithm based on chain's local changes of conformation. The differences and similarities in the percolation behavior are shown and discussed. The percolation threshold is found to be very weakly dependent on the chain length, however, it appears that the main factor that influenced the percolation threshold is the screening effect of other parts of chains.

     

Effect of amino acid modifications on the molecular structure of adsorbed and nonadsorbed bombesin 6–14 fragments on an electrochemically roughened silver surface

This work used infrared absorption and Raman spectroscopy to determine the structure of seven modified fragments (residues 6–14 of the polypeptide chain) of bombesin (BN^6–14). The peptides studied are cyclo[D ‐Phe⁶, His⁷, Leu¹⁴]BN^6–14, [D ‐Phe⁶, Leu‐NHEt¹³, des‐Met¹⁴]BN^6–14, [D ‐Phe⁶, Leu¹³‐®‐p‐chloro‐Phe¹⁴]BN^6–14, [D ‐Phe⁶, β‐Ala¹¹, Phe¹³, Nle¹⁴]BN^6–14, [D ‐Tyr⁶, β‐Ala¹¹, Phe¹³, Nle¹⁴]BN^6–14, [D ‐Tyr⁶, β‐Phe¹¹, Phe¹³, Nle¹⁴OH]BN^6–14 and [D ‐Cys⁶, Asn⁷, D ‐Ala¹¹, Cys¹⁴]BN^6–14. These peptides are potent bombesin agonists useful in the treatment of tumors. Surface‐enhanced Raman scattering (SERS) spectroscopy was also used to examine the behavior of these molecules on an electrochemically roughened silver surface. The SERS spectra reveal that substituting native amino acids in these molecules with synthetic ones changes their adsorption state slightly on an electrochemically roughened surface of silver. The peptides [D ‐Tyr⁶, β‐Ala¹¹, Phe¹³, Nle¹⁴]BN^6–14 and [D ‐Tyr⁶, β‐Phe¹¹, Phe¹³, Nle¹⁴OH]BN^6–14 tend to adsorb strongly on this surface via C fragment (∼1400 cm⁻¹). The observed medium enhancement of the Trp⁸ residue and amide bond Raman signals indicate further interactions between these fragments and the surface. [D ‐Phe⁶, Leu‐NHEt¹³, des‐Met¹⁴]BN^6–14 and [D ‐Cys⁶, Asn⁷, D ‐Ala¹¹, Cys¹⁴]BN^6–14 are shown to be coordinated to the silver through  CONH , CO, and the indole ring. The strongest SERS bands (∼1506, ∼1275, ∼1149, and ∼1007 cm⁻¹) of [D ‐Phe⁶, Leu¹³‐®‐p‐chloro‐Phe¹⁴]BN^6–14 and [D ‐Phe⁶, β‐Ala¹¹, Phe¹³, Nle¹⁴]BN^6–14 suggest that these two peptides bind to the silver via Trp⁸ and  CONH . In the case of cyclo[D ‐Phe⁶, His⁷, Leu¹⁴]BN^6–14, the formation of a peptide/Ag complex is confirmed by the strong SERS bands involving Trp⁸ and  CONH vibrations, which are accompanied by a SERS signal due to the CO vibrations. For these analogs, the relative potency for inhibition of binding of ¹²⁵I‐[Tyr⁴]BN to rat pancreas acini cells was correlated with the behavior of the amide bond on the silver surface, while the contribution of the structural components to the ability to interact with the rGRP‐R was correlated with the SERS patterns. Copyright © 2008 John Wiley & Sons, Ltd.