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111.
Hirakawa Y Suzuto M Ohnishi H Shingaki T Eyring EM Tokunaga M Masujima T 《The Analyst》2003,128(6):676-680
The nano-kinetic movement of a single DNA molecule was observed and analyzed by a newly developed video-microscope system with an optical fiber, called a pin-fiber video scope. A single lambda-DNA molecule was put in focus using fiber-illumination, and the stretching and shrinking motion was measured. The molecule's kinetics were analyzed by numerical calculations and are discussed. A photocleavage phenomenon of DNA molecules was also visualized by the pin-fiber video scope. The new video-microscope system has the potential to observe and analyze the nano-kinetics of a single molecule. 相似文献
112.
Zartler ER Hanson J Jones BE Kline AD Martin G Mo H Shapiro MJ Wang R Wu H Yan J 《Journal of the American Chemical Society》2003,125(36):10941-10946
The crucial step in drug discovery is the identification of a lead compound from a vast chemical library by any number of screening techniques. NMR-based screening has the advantage of directly detecting binding of a compound to the target. The spectra resulting from these screens can also be very complex and difficult to analyze, making this an inefficient process. We present here a method, RAMPED-UP NMR, (Rapid Analysis and Multiplexing of Experimentally Discriminated Uniquely Labeled Proteins using NMR) which generates simple spectra which are easy to interpret and allows several proteins to be screened simultaneously. In this method, the proteins to be screened are uniquely labeled with one amino acid type. There are several benefits derived from this unique labeling strategy: the spectra are greatly simplified, resonances that are most likely to be affected by binding are the only ones observed, and peaks that yield little or no information upon binding are eliminated, allowing the analysis of multiple proteins easily and simultaneously. We demonstrate the ability of three different proteins to be analyzed simultaneously for binding to two different ligands. This method will have significant impact in the use of NMR spectroscopy for both the lead generation and lead optimization phases of drug discovery by its ability to increase screening throughput and the ability to examine selectivity. To the best of our knowledge, this is the first time in any format that multiple proteins can be screened in one tube. 相似文献
113.
Pill-Soon Song Edward B. Walker Richard D. Vierstra Kenneth L. Poff 《Photochemistry and photobiology》1980,32(3):393-398
Abstract— The blue light absorption band of roseoflavin is polarized along the axis roughly connecting N3 -C8 positions. A weak, second π→π* transition with a polarization angle of ca. 25° is hidden under the short wavelength side of the blue absorption band. The excited state of roseoflavin is somewhat more basic than the ground state, by a 1.5 p K a unit. The fluorescence quantum yield and lifetime of roseoflavin are substantially lower than those of other flavins, thus making it kinetically less efficient as a blue light photoreceptor. 相似文献
114.
O'Neil-Cabello E Bryce DL Nikonowicz EP Bax A 《Journal of the American Chemical Society》2004,126(1):66-67
A new three-dimensional NMR experiment is described that yields five scalar or dipolar couplings from a single cross-peak between three spins. The method is based on the E.COSY principle and is demonstrated for the H1'-C1'-C2' fragment of ribose sugars in a uniformly 13C-enriched 24-nucleotide RNA stem-loop structure, for which a complete set of couplings was obtained for all nonmodified nucleotides. The values of the isotropic J couplings and the 13C1' and 13C2' chemical shifts define the sugar pucker. Once the sugar pucker is known, the five dipolar couplings between C1'-H1', C2'-H2', H1'-H2', C1'-H2', and C2'-H1', together with C1'-C2', C3'-H3', and C4'-H4' available from standard experiments, can be used to derive the five unknowns that define the local alignment tensor, thereby simultaneously providing information on relative orientation and dynamics of the ribose units. Data indicate rather uniform alignment for all stem nucleotides in the 24-nt stem-loop structure, with only a modest reduction in order for the terminal basepair, but significantly increased mobility in part of the loop region. The method is applicable to proteins, nucleic acids, and carbohydrates, provided 13C enrichment is available. 相似文献
115.
Zhang C Staunton E Andreev YG Bruce PG 《Journal of the American Chemical Society》2005,127(51):18305-18308
Polymer electrolytes, salts dissolved in solid polymers, hold the key to realizing all solid-state devices such as rechargeable lithium batteries, electrochromic displays, or SMART windows. For 25 years conductivity was believed to be confined to amorphous polymer electrolytes, all crystalline polymer electrolytes were thought to be insulators. However, recent results have demonstrated conductivity in crystalline polymer electrolytes, although the levels at room temperature are too low for application. Here we show, for the first time, that it is possible to raise significantly the level of ionic conductivity by aliovalent doping. The conductivity may be raised by 1.5 orders of magnitude if the SbF6- ion in the crystalline conductor poly(ethylene oxide)6:LiSbF6 is replaced by less than 5 mol % SiF6(2-), thus introducing additional, mobile, Li+ ions into the structure to maintain electroneutrality. 相似文献
116.
Poulsen MD Peronne E Stapelfeldt H Bisgaard CZ Viftrup SS Hamilton E Seideman T 《The Journal of chemical physics》2004,121(2):783-791
The rotational revival structure of asymmetric top molecules, following irradiation by an intense picosecond laser pulse, is explored theoretically and experimentally. Numerically we solve nonperturbatively for the rotational dynamics of a general asymmetric top subject to a linearly polarized intense pulse, and analyze the dependence of the dynamical alignment on the field and system parameters. Experimentally we use time-resolved photofragment imaging to measure the alignment of two molecules with different asymmetry, iodobenzene, and iodopentafluorobenzene. Our numerical results explain the experimental observations and generalize them to other molecules. The rotational revival structure of asymmetric tops differs qualitatively from the intensively studied linear top case. Potentially it provides valuable structural information about molecules. 相似文献
117.
John S. Showell Henry M. Fales Edward A. Sokoloski 《Journal of mass spectrometry : JMS》1989,24(8):632-636
A series of mixtures of solid triglycerides and waxes are examined using 252Cf plasma desorption mass spectrometry. The relative abundances of diagnostic ions are found to vary with sample preparation, handling, and composition. It is proposed that the less efficiently packing, shorter chain, compounds are forced to the analysis site, i.e. the surface. This takes place at varying rates that reflect the bulk properties of the mixture as revealed by its phase diagram and thermal history. Mixtures that remain liquids during analysis show ion abundances correctly reflecting their composition. Mixtures of isotopomeric glycerides also show normal ion abundances. 相似文献
118.
The Curtin-Hammett (C-H) principle and the Winstein-Holness (W-H) equation approximate the product ratio and overall rate constant of reaction for systems involving a starting material which exists in two forms, each of which reacts via first-order kinetics to give a different product. The C-H/W-H approximations are valid when the rates of isomer interconversion are significantly faster than the rates of product formation. The present treatment encompasses non-first-order reactions to product. A numerical predictor-corrector technique is used to show (1) that relative reagent concentration can affect both the product ratio and the observed rates of product formation; (2) that the absolute concentration of reagent and substrate can affect the kinetics; and (3) that factors (1) and (2) above can affect the validity of the C-H/W-H approximations for non-first-order C-H/W-H schemes. 相似文献
119.
Combinatorial chiral separations were performed on a 96-capillary array electrophoresis system. A comprehensive enantioseparation protocol employing neutral and sulfated cyclodextrins as chiral selectors for common basic, neutral and acidic compounds was developed. By using only four judiciously chosen separation buffers, successful enantioseparations were achieved for 49 out of 54 test compounds spanning a large variety of pK and structures. Therefore, unknown compounds can be screened in this manner to identify the optimal enantioselective conditions in just one run. 相似文献
120.
Capon RJ Skene C Liu EH Lacey E Gill JH Heiland K Friedel T 《Natural product research》2004,18(4):305-309
Bioassay directed fractionation of a Raspailia (Raspailia) sp. (Order Poecilosclerida; Family Raspailiidae) collected during scientific trawling operations off the Northern Rottnest Shelf yielded as nematocidal agents the known metabolites, phorboxazoles A (1) and B (2). Further examination revealed the new natural product but known synthetic compound, esmodil (3). The structure for 3 was confirmed by spectroscopic analysis and total synthesis. 相似文献