Bioluminescence in Dinoflagellates: Evidence that the Adaptive Value of Bioluminescence in Dinoflagellates is Concentration Dependent

Three major hypotheses have been proposed to explain why dinoflagellate bioluminescence deters copepod grazing: startle response, aposematic warning, and burglar alarm. These hypotheses propose dinoflagellate bioluminescence (A) startles predatory copepods, (B) warns potential predators of toxicity, and (C) draws the attention of higher order visual predators to the copepod's location. While the burglar alarm is the most commonly accepted hypothesis, it requires a high concentration of bioluminescent dinoflagellates to be effective, meaning the bioluminescence selective advantage at lower, more commonly observed, dinoflagellate concentrations may result from another function (e.g. startle response or aposematic warning). Therefore, a series of experiments was conducted to evaluate copepod grazing (Acartia tonsa) on bioluminescent dinoflagellates (during bioluminescent and nonbioluminescent phases, corresponding to night and day, respectively) at different concentrations (10, 1000, and 3000 cells mL^?1), on toxic (Pyrodinium bahamense var. bahamense) and nontoxic (Lingulodinium polyedrum) bioluminescent dinoflagellates, and in the presence of nonluminescent diatoms (Thalassiosira eccentrica). Changes in copepod ingestion rates, clearance rates, and feeding preferences as a result of these experimental factors, particularly during the mixed trails with nonluminescent diatoms, indicate there is a concentration threshold at which the burglar alarm becomes effective and below which dinoflagellate bioluminescence functions as an aposematic warning.     

A New Photochemical Reaction of Sulfonic Acid Esters

Abstract

In 1968 Zen and coworkers reported that thep-tolylsulfonyl group could be removed from carbohydrate systems by photochemical reaction (eq 1).¹ Since then other investigators have used this deprotection process in carbohydrate synthesis.^2-10 Mechanistic studies^11-16 have shown that tosylate photolysis is promoted by compounds (e.g., triethylamine) that donate an electron to an excitedp-toluenesulfonate to generate a radical anion (1). This intermediate then fragments to form the anion of the deprotected sugar (Scheme 1). Since generating a radical anion is the central element in this photochemical process, structural changes that impact radical anion formation should influence the reaction. Replacing the p - tolylsulfonyl group with the pentafluorophenylsulfonyl group generates a more stable radical anion (2) because the electronegative fluorine atoms can help stabilize the negative charge. Since we have a continuing interest in the photochemistry of sulfonic acid esters, we synthesized the pentafluorobenzenesulfonates (pentaflates) 3-6 and studied their photochemistry under electron transfer conditions.     

Chemical Processes Involving 18-Crown-6-Ether in Activated Noncovalent Complexes with Protonated Peptides

These last decades, it has been widely assumed that 18-crown-6-ether (CE) plays a spectator role during the chemical processes occurring in isolated host-guest complexes between peptides or proteins and CE after activation in mass spectrometers. Our present experimental and theoretical results challenge this hypothesis by showing that CE can abstract a proton or a protonated molecule from protonated peptides after activation by collisions in argon or electron capture/transfer. Furthermore, thanks to comparison between experimental and calculated values of collision cross-sections, we demonstrate that CE can change binding site after electron transfer. We also propose detailed mechanisms for these processes.     

All-Pairs Small-Stretch Paths

Let G = (V, E) be a weighted undirected graph. A path between u, v  V is said to be of stretch t if its length is at most t times the distance between u and v in the graph. We consider the problem of finding small-stretch paths between all pairs of vertices in the graph G.It is easy to see that finding paths of stretch less than 2 between all pairs of vertices in an undirected graph with n vertices is at least as hard as the Boolean multiplication of two n × n matrices. We describe three algorithms for finding small-stretch paths between all pairs of vertices in a weighted graph with n vertices and m edges. The first algorithm, STRETCH₂, runs in Õ(n^3/2m^1/2) time and finds stretch 2 paths. The second algorithm, STRETCH_7/3, runs in Õ(n^7/3) time and finds stretch 7/3 paths. Finally, the third algorithm, STRETCH₃, runs in Õ(n²) and finds stretch 3 paths.Our algorithms are simpler, more efficient and more accurate than the previously best algorithms for finding small-stretch paths. Unlike all previous algorithms, our algorithms are not based on the construction of sparse spanners or sparse neighborhood covers.     

Conjugacy classes and finite p-groups

Let G be a finite p-group, where p is a prime number, and a ∈ G. Denote by Cl(a) = {gag⁻¹| g ∈ G} the conjugacy class of a in G. Assume that |Cl(a)| = pⁿ. Then Cl(a) Cl(a⁻¹) = {xy | x ∈ Cl(a), y ∈ Cl(a⁻¹)} is the union of at least n(p − 1) + 1 distinct conjugacy classes of G. Received: 16 December 2004     

Eine Methode zur Analyse sehr kleiner Monazitmengen

Zusammenfassung An natürlichen Monaziten wurde eine Methode für die MikroGesamtanalyse dieser Mineralien entwickelt. Dieser Analysengang wurde sodann, an einem künstlichen Gemenge, welches ähnlich den natürlich vorkommenden Monaziten zusammengesetzt war und lediglich von den Nebenbestandteilen etwas größere Mengen enthielt, überprüft und für ausreichend genau befunden. Für Blei jedoch wurde eine Spezialmethode ausgearbeitet, da es nicht möglich war, innerhalb des beschriebenen Gesamtanalysenganges befriedigende Bleiwerte zu erhalten.Es ist uns eine angenehme Pflicht, dem Vorstand des Instituts, Herrn Professor Dr. A. Franke, für seine wirksame Förderung unserer Arbeit unseren wärmsten Dank auszusprechen.     

A joint theoretical and experimental investigation on the 13C and 1H NMR chemical shifts of coumarin derivatives

¹H and ¹³C NMR chemical shifts of coumarin derivatives have been determined using first principles approaches with and without accounting for the effects of the solvent and compared to experiment in order to assess their reliability. Good linear relationships are obtained between theory and experiment, which allows correcting the calculated values for systematic errors. This is particularly the case when using the PCM scheme to model the solvent effects because the δ values larger than 150 ppm are more difficult to reproduce. The final accuracy of the method amounts to about 1 ppm for ¹³C and 0.05 ppm for ¹H.     

Deuteration of Water Enables Self‐Organization of Phospholipid‐Based Reverse Micelles

Phospholipid‐based reverse micelles are composed of branched cylinders. Their branching points are known to attract themselves and to slide along branches. The rate of this sliding is governed by the lifetime of H(D)‐bonded water bridges between phospholipid molecules. This lifetime is increased when the water is deuterated. On condition that the water contains at least 40 D atoms %, water/dipalmitoylphosphatidylcholine (DPPC)/deuterated pyridine reverse micelles with the composition 1.1:1:250 (v/v) have been shown to self‐organize into a liquid crystal in the 310–316 K temperature range. The mechanism of this self‐organization is unraveled by following the FTIR and ¹H NMR spectra of more concentrated micelles upon heating. During the preparation of micelles, pyridine‐(D⁺)H⁺ ions are formed. They give rise to hydron transfers, under the influence of the DPPC electric charges, evidenced by two broad FTIR absorptions above (BB1) and below (BB2) the ν(C? O) stretch. These hydron transfers occur along strong (D⁺)H⁺ bonds of pyridinium ions with pyridine (BB1) and DPPC C?O groups (BB2). The proton transfers at the interface of micelles, relayed in the continuous pyridine medium, create a tenuous link between separated micelles, thus facilitating their organization. Upon heating, DPPC heads shrink and DPPC chains expand to make wedge‐shaped DPPC molecules. The micelles then change in shape: cylinders constrict and enclosed water drifts towards branching points, which swell. Branching points of neighboring micelles come into contact. Due to the deuteration of water these contacts are prolonged and H bonds are formed between DPPC molecules located in each branching point. Upon storage at 39 °C, these branching points fuse. The lateral diffusion of DPPC molecules becomes free, as evidenced by a narrowing of all ¹H NMR resonances. Upon further heating, reorganization into a liquid crystal occurs.     

Theoretical and experimental investigation of the structural and spectroscopic properties of coumarin 343 fluoroionophores

A joint theoretical-experimental investigation has been carried out to unravel the details of the complexation of cations by fluoroionophores based on coumarin 343 and to interpret the modifications in the ligand and also in the coumarin structural, electronic, magnetic, and vibrational properties. It is confirmed that C343-dea (1) complexes the cations by both the lactone and the amide oxygen atoms whereas for C343-crown (2) and C343-dibenzocrown (3), the cations are complexed by the oxygen atoms of the lactone as well as those of the crown ligand. These complexations induce geometric modifications, which are delocalized over the coumarin backbone and are related to electronic reorganizations that modify the spectroscopic signatures. This paper analyzes these signatures and shows how they are related as well as how they can be used to monitor the complexation process. Upon complexation, the UV-visible absorption spectra display a bathochromic shift of the most intense electronic transition; this shift is generally larger for the most flexible compound 1 as well as when complexing divalent cations. NMR spectra bear many signatures of the complexation, of which the most remarkable ones are the large shielding of C(1) and the large deshieldings of C(9) and C(16). Additional makers of complexation are highlighted in the IR vibrational spectra, in particular the bands associated with the lactone and amide CO vibrations, which are downshifted when the corresponding CO is involved in the complexation mode and, otherwise, upshifted. A high degree of consistency characterizes the different geometrical, electronic, magnetic, and vibrational signatures, which substantiates the assignment of the modes of complexation in 1-3. In addition, the agreement between the experimental data and the theoretical values is rather satisfactory, in that it at least enables us to interpret the spectral signatures.