Pressure-induced structural transformation in radiation-amorphized zircon

We study the response of a radiation-amorphized material to high pressure. We have used zircon ZrSiO4 amorphized by natural radiation over geologic times, and have measured its volume under high pressure, using the precise strain-gauge technique. On pressure increase, we observe apparent softening of the material, starting from 4 GPa. Using molecular dynamics simulation, we associate this softening with the amorphous-amorphous transformation accompanied by the increase of local coordination numbers. We observe permanent densification of the quenched sample and a nontrivial "pressure window" at high temperature. These features point to a new class of amorphous materials that show a response to pressure which is distinctly different from that of crystals.     

Theoretical studies on the interaction of partial agonists with the 5-HT<Subscript>2A</Subscript> receptor

A series of 51 5-HT_2A partial agonistic arylethylamines (primary or benzylamines) from different structural classes (indoles, methoxybenzenes, quinazolinediones) was investigated by fragment regression analysis (FRA), docking and 3D-QSAR approaches. The data, pEC₅₀ values and intrinsic activities (E_max) on rat arteries, show high variability of pEC₅₀ from 4 to 10 and of E_max from 15 to 70%. FRA indicates which substructures affect potency or intrinsic activity. The high contribution of halogens in para position of phenethylamines to pEC₅₀ points to a specific hydrophobic pocket. Other results suggest the significance of hydrogen bonds of the aryl moiety for activation and the contrary effect of benzyl groups on affinity (increasing) and intrinsic activity (decreasing). Results from fragment regression and data on all available mutants were considered to derive a common binding site at the rat 5-HT_2A receptor. After generation and MD simulations of a receptor model based on the β₂-adrenoceptor structure, typical derivatives were docked, leading to the suggestion of common interactions, e.g., with serines in TM3 and TM5 and with a cluster of aromatic amino acids in TM5 and TM6. The whole series was aligned by docking and minimization of the complexes. The pEC₅₀ values correlate well with Sybyl docking energies and hydrophobicity of the aryl moieties. With this alignment, CoMFA and CoMSIA approaches based on a training set of 36 and a test set of 15 compounds were performed. The correlation of pEC₅₀ with steric, electrostatic, hydrophobic and H-bond acceptor fields resulted in sufficient fit (q ²: 0.75–0.8, r ²: 0.92–0.95) and predictive power (r _pred²: 0.85–0.88). The important interaction regions largely reflect the patterns provided by the putative binding site. In particular, the fit of the aryl moieties and benzyl substituents to two hydrophobic pockets is evident.     

Synthesis of Poly(lactide)s with Modified Thermal and Mechanical Properties

The use of poly(lactide)‐based materials is, in part, limited by their physical and mechanical properties. This article reviews the methods that have been employed to enable enhancement of the materials properties through synthetic manipulation of the polymer structure including block copolymer synthesis and modification of the lactide monomer structure, focusing on the application of ring‐opening polymerization. In turn the effect of these structural modifications on the properties of the resultant materials are reported.

     

Recent Advances and Challenges in the Design of Organic Photoacid and Photobase Generators for Polymerizations

Photopolymerization, or the use of light to trigger polymerization, is one of the most exciting technologies for advanced manufacturing of polymers. One of the key components in the photopolymerization processes is the photoactive compound that absorbs the light, generating the active species that promotes the polymerization and largely determines the final properties of the material. The field of photopolymerization has been dominated by photoradical generators to mediate radical reactions. In the last decade, to expand the number of polymers that can be prepared by photopolymerization, intensive research has been devoted to the synthesis and utilization of photoactive molecules that are able to generate a base or an acid upon irradiation. These organic compounds are known to promote not only the ring‐opening polymerization of various heterocyclic monomers such as lactones, carbonates, or epoxides but also to trigger the step‐growth synthesis of polyurethanes. This Minireview highlights the recent advances in the development of organic photobase and photoacid generators, with the aim of encouraging the wider application of these photoactive compounds in the photopolymerization area and to expand the use of these polymers in advanced manufacturing processes.     

Temperature and pH studies of short tandem repeat systems using capillary electrophoresis at elevated pH

The DNA secondary structure can affect the migration time and precision of DNA separations in the physical gels used in capillary electrophoresis (CE). To counteract these effects, DNA typing is performed using elevated temperatures (60 degrees C) and high concentrations (7 M) of urea. These conditions affect the precision and lifetime of the analysis. To better understand the effects of these conditions on the reproducibility of DNA migration, we examined the effects of temperature and pH on short tandem repeat (STR) analysis using the PE/ABI 310 Genetic Analyzer. Separations were performed using the Profiler + multiplex system, a set of coamplified STRs with a 4-base repeat motif, labeled at the 5'-end using fluorescent dyes. The analytical separations were obtained using a commercial buffer at pH 8 and an experimental buffer consisting of 3% hydroxyethylcellulose at pH settings ranging from 8-12. Multichannel laser-induced fluorescence detection was used. Temperatures were examined from 30-70 degrees C. The results demonstrate the fact that highly efficient separations can be carried out at alkaline pH. In addition, improvements in temperature stability were seen when compared to results at lower pH. However, high concentrations of urea were found to be necessary to achieve optimal resolution.     

Independent Control of Elastomer Properties through Stereocontrolled Synthesis

In most synthetic elastomers, changing the physical properties by monomer choice also results in a change to the crystallinity of the material, which manifests through alteration of its mechanical performance. Using organocatalyzed stereospecific additions of thiols to activated alkynes, high‐molar‐mass elastomers were isolated via step‐growth polymerization. The resulting controllable double‐bond stereochemistry defines the crystallinity and the concomitant mechanical properties as well as enabling the synthesis of materials that retain their excellent mechanical properties through changing monomer composition. Using this approach to elastomer synthesis, further end group modification and toughening through vulcanization strategies are also possible. The organocatalytic control of stereochemistry opens the realm to a new and easily scalable class of elastomers that will have unique chemical handles for functionalization and post synthetic processing.