Factors Influencing the Course of the Macrocyclization of α,ω‐Diamines with Esters of α,ω‐Dicarboxylic Acids

The efficient synthesis of eight new macrocyclic amides (lactams) via reaction of diesters with diamines under normal dilution conditions is described. The role of intermolecular H‐bond formation and steric hindrance is discussed based on ¹H‐ and ¹⁵N‐NMR studies of appropriate model compounds. Principles for the optimal choice of esters that can be efficiently transformed into diamides have been developed.     

Understanding the mechanism of short-range electron transfer using an immobilized cupredoxin

The hydrophobic patch of azurin (AZ) from Pseudomonas aeruginosa is an important recognition surface for electron transfer (ET) reactions. The influence of changing the size of this region, by mutating the C-terminal copper-binding loop, on the ET reactivity of AZ adsorbed on gold electrodes modified with alkanethiol self-assembled monolayers (SAMs) has been studied. The distance-dependence of ET kinetics measured by cyclic voltammetry using SAMs of variable chain length, demonstrates that the activation barrier for short-range ET is dominated by the dynamics of molecular rearrangements accompanying ET at the AZ-SAM interface. These include internal electric field-dependent low-amplitude protein motions and the reorganization of interfacial water molecules, but not protein reorientation. Interfacial molecular dynamics also control the kinetics of short-range ET for electrostatically and covalently immobilized cytochrome c. This mechanism therefore may be utilized for short-distance ET irrespective of the type of metal center, the surface electrostatic potential, and the nature of the protein-SAM interaction.     

Deuterium-labelled N-acyl-L-homoserine lactones (AHLs)--inter-kingdom signalling molecules--synthesis, structural studies, and interactions with model lipid membranes

N-Acyl-l-homoserine lactones (AHLs) are synthesized by Gram-negative bacteria. These quorum-sensing molecules play an important role in the context of bacterial infection and biofilm formation. They also allow communication between microorganisms and eukaryotic cells (inter-kingdom signalling). However, very little is known about the entire mechanism of those interactions. Precise structural studies are required to analyse the different AHL isomers as only one form is biologically most active. Theoretical studies combined with experimental infrared and Raman spectroscopic data are therefore undertaken to characterise the obtained compounds. To mimic interactions between AHL and cell membranes, we studied the insertion of AHL in supported lipid bilayers, using vibrational sum-frequency-generation spectroscopy. Deuterium-labelled AHLs were thus synthesized. Starting from readily available deuterated fatty acids, a two-step procedure towards deuterated N-acyl-l-homoserine lactones with varying chain lengths is described. This included the acylation of Meldrum’s acid followed by amidation. Additionally, the detailed analytical evaluation of the products is presented herein.     

Controlled Radical Polymerization

Various methods which lead to the control of molecular weight and polydispersities, and which allow for the preparation of block copolymers by radical polymerization are discussed. Thermal polymerizationof styrenes in the presence of stable radicals, polymerization of vinyl acetate and methyl methacrylate in the presence of chromium complexed by macrocyclic ligands polymerization of vinyl acetate initiated by organoaluminum compounds complexed by dipyridyl and activated by stable radicals, as well as in the presence of phosphites, are described in detail.     

Racemization-Free Recovery of α-Hydroxyphosphonates from Their Carboxylic Esters

Ammonolysis (25% aqueous NH₃ - alcohols or THF) of carboxylic esters obtained from diastereoisomerically pure α-hydroxyphosphonates leads to recovery of the phosphonates without racemization in good to excellent yields.     

Effect of the fibre-forming material structure and silica nanoparticles

The paper discusses the thermal properties of alginate fibres made from alginic acid or sodium alginate and from alginates substituted with divalent metal ions during the fibre-forming stage. Alginate fibres with an addition of silica nanoparticles have also been examined. The selection of fibre-forming parameters was intended to obtain the best either sorption or strength properties depending on the specific fibre application. Thermal curves of the fibres under investigations obtained by under air atmosphere and differential scanning calorimetry (DSC) under neutral gas atmosphere have been interpreted from the view of physical and chemical changes in the fibre-forming material. Based on thermogravimetric curves, the fibre thermal stability indices have been determined. It has been found that the addition of silica nanoparticles exerts a positive influence on the thermal properties of the examined fibres.     

Polymeric complexes of cornstarch and waxy cornstarch phosphates with milk casein and their performance as biodegradable materials

Complexes of phosphated cornstarch and waxy cornstarch with casein were prepared and characterised. They were prepared from casein in defatted milk and corn and waxy corn starches phosphated to degree of substitution values (DS) of 0.0637 and 0.0968, respectively. The components were blended in starch to casein ratios of 2:1, 1:1, and 1:2, then precipitated with hydrochloric acid. Aqueous solubility, water binding capacity, IR spectra, and thermal analysis (thermogravimetry, TG, and differential thermogravimetry, DTG) of the precipitates revealed that they were not simple physical mixtures of the components. The components interact with one another electrostatically with involvement of the starch phosphate groups and the peptide bonds of casein as documented by the IR spectra. Because of their insolubility in 7 M aqueous urea solution they might also be considered as complexes in which the components were chemically bound. Enzymatic studies showed that they are biodegradable materials.     

Application of the DFT Theory to Study Cobalamin Complexes

The aim of present study is to select the best methodology in the frame of the Density Functional Theory (DFT), which may be employed to study the cobalamin complexes. Our discussion is limited to two approaches, one in which hybrid B3LYP and UB3LYP functionals are used, and the second in which geometry parameters are calculated within LDA-VWN functional, and energies of the investigated systems are computed within RPBE functional. Results of performed calculations show that both methodologies can be successfully applied to study cobalamin derivatives. Probably because of the small ligand binding energies in the studied complexes, the B3LYP and UB3LYP functionals may be used only to predict the pattern of changes in the binding energies. The use of the RPBE functional, originally parameterized to reproduce in a proper way the chemisorption energies of the small molecules on the metallic surfaces, allows to improve their values so as they fit into experimental data. Geometry parameters of the investigated complexes computed within both approaches are in good agreement with the experimental values. Interatomic distances are a little overestimated while calculated within both hybrid functionals, what is in contrast to VWN functional results. The latter, in general, gives shorter distances as observed experimentally.     

RP-TLC Separation of Antiarrhythmic Drugs. Densitometric Analysis of Flecainide in Tablets

JPC – Journal of Planar Chromatography – Modern TLC - The chromatographic behavior of some antiarrhythmic compounds has been studied on commercially available TLC plates coated with...