Diels-Alder reactions of quinol lactones: a change of regioselectivity with stannic chloride catalysis

Lewis acid-mediated Diels-Alder reactions of quinol lactone 2 gave regioselectivity opposite to that of the uncatalyzed reaction. Compound 12 is proposed as the reactive intermediate generated by the reaction of 2 with stannic chloride.     

Intercalation of α,ω-alkyldiamines in layered α-zirconium phosphate and the inclusion behaviour of some of the intercalates obtained

The paper reports a study on the intercalation mechanism of NH₂(CH₂) _n NH₂ (withn=2, 4, 6, 8, 10) diamines in layered Zr(HOPO₃)₂·H₂O, performed by titrating the host with aqueous solutions of amines at 80°C. The intercalation reactions occur stepwise according to the ‘moving boundary’ model, with the formation of a number of intermediate intercalation compounds of formula Zr(HOPO₃)₂·xNH₂(CH₂) _n NH₂ (0<x<1) before obtaining the fully intercalated ones (x=1). For each diamine the batch titration curve and a diagram of the phases involved in the interaclation reaction are reported. Twenty-two intercalation compounds have been isolated and characterized by their composition, XRD patterns and thermal behaviour, and information on the disposition of the guests within the interlayer region have been derived. At full intercalation the diamines form a monolayer of extended molecules with their axis inclined at 58° to the plane of the sheet. The terminal amino groups are protonated by the —POH groups of the host, thus each diamine binds adjacent layers and, in a sense, transforms a layered structure into a framework structure that may have an accessible or potentially accessible porosity. The intercalation compound Zr(HOPO₃)₂·0.5NH₂(CH₂)₈NH₂ is indeed able to include polar molecules such as water and short chain alkanols.     

Synthesis of 2‐Dihydrooxadiazolinyl Chromones

Reactions of the substituted 2‐formyl chromones with aroylhydrazines gave corresponding 2‐(aroylhydrazonomethylidyne) chromones. Then 2‐(3′‐acetyl‐5′‐aryl‐2′,3′‐dihydro‐1′,3′,4′‐oxadiazol‐2′‐yl) chromones were prepared by these 2‐(aroylhydrazonomethylidyne) chromones under refluxing with Ac₂O. All target compounds were characterized through elemental analysis and IR, ¹H NMR, MS.     

pKa calculations in solution and proteins with QM/MM free energy perturbation simulations: a quantitative test of QM/MM protocols

The accuracy of biological simulations depends, in large part, on the treatment of electrostatics. Due to the availability of accurate experimental values, calculation of pKa provides stringent evaluation of computational methods. The generalized solvent boundary potential (GSBP) and Ewald summation electrostatic treatments were recently implemented for combined quantum mechanical and molecular mechanics (QM/MM) simulations by our group. These approaches were tested by calculating pKa shifts due to differences in electronic structure and electrostatic environment; the shifts were determined for a series of small molecules in solution, using various electrostatic treatments, and two residues (His 31, Lys 102) in the M102K T4-lysozyme mutant with large pKa shifts, using the GSBP approach. The calculations utilized a free energy perturbation scheme with the QM/MM potential function involving the self-consistent charge density functional tight binding (SCC-DFTB) and CHARMM as the QM and MM methods, respectively. The study of small molecules demonstrated that inconsistent electrostatic models produced results that were difficult to correct in a robust manner; by contrast, extended electrostatics, GSBP, and Ewald simulations produced consistent results once a bulk solvation contribution was carefully chosen. In addition to the electrostatic treatment, the pKa shifts were also sensitive to the level of the QM method and the scheme of treating QM/MM Coulombic interactions; however, simple perturbative corrections based on SCC-DFTB/CHARMM trajectories and higher level single point energy calculations were found to give satisfactory results. Combining all factors gave a root-mean-square difference of 0.7 pKa units for the relative pKa values of the small molecules compared to experiment. For the residues in the lysozyme, an accurate pKa shift was obtained for His 31 with multiple nanosecond simulations. For Lys 102, however, the pKa shift was estimated to be too large, even after more than 10 nanosecond simulations for each lambda window; the difficulty was due to the significant, but slow, reorganization of the protein and water structure when Lys 102 was protonated. The simulations support that Lys 102 is deprotonated in the X-ray structure and the protein is highly destabilized when this residue is protonated.     

LC-ESI-MS Determination of Bilobalide and Ginkgolides in Canine Plasma

A sensitive and selective method using liquid chromatography with electrospray ionization mass spectrometric detection was developed for the quantification of bilobalide and ginkgolides in canine plasma. The analytes were extracted with diethyl ether-dichloromethane-isopropanol (6:3:1, v/v) after spiking the samples with daidzein (internal standard). The lower limit of quantification (LLOQ) of the method was 2.5 μg L⁻¹ for ginkgolide B and 10.0 μg L⁻¹ for bilabolide, ginkgolide A and ginkgolide C. The accuracy of the method was within 15% of the actual values over a wide range of plasma concentrations. The intra-day and inter-day precision was better than 15% (R.S.D.). Finally, the LC-ESI-MS method was successfully applied to study the pharmacokinetics of ginkgolides and bilabolide after administration of Ginkgo biloba extracts to dogs.     

Kinetic and catalytic aspects of dimethylterephtalate transesterification also through the use of model molecules

Kinetic and catalytic aspects of DMT transesterification reaction, key step in the industrial production of polyethylenterephtalate (PET), have been deepened also through the use of model molecules such as CH₃COO–Ph–X. These molecules give the same reactions with ethylene glycol occurring in the DMT transesterification too. The use of model molecules in the study of this reaction seems therefore to be promising in perspective. As we observed, however, the nature of the para-substituent X has a very strong influence on the reaction rate, when salts of bivalent metals such as Zn, Cd, Co, Mg, Mn, are used as catalysts, while this influence is much smaller when a tetravalent metal, as Ti, is used. This fact suggests that the transesterification mechanism operating in the two cases is different and this suggestion has been confirmed by applying Hammett's approach to the available kinetic data. Experimental kinetic runs were all performed at 193°C, by withdrawing small samples of the reaction mixture at different reaction times. These samples were gaschromatographically analyzed. We found volcano shaped curves of the reaction rates as a function of the metal ion acidities and we obtained different trends with a maximum of activity shifted from a metal to another for different substrates. A comparison of the kinetic results obtained, respectively, with the model molecules and DMT will be reported too.     

Bistatic scattering by arbitrarily shaped objects with rough surface at optical and infrared frequencies

The scattering cross sections for arbitrarily shaped dielectric objects with rough surface are determined for optical and infrared frequencies using the Kirchhoff approximation. The formula of the coherent scattering cross section is derived, and numerical method of incoherent scattering cross section is given. As a specific example, the infrared laser scattering cross sections of rough spheres are calculated at 1.06 m.