Inverse Sturm–Liouville spectral problem on symmetric star‐tree

A spectral problem for the Sturm–Liouville equation on the edges of an equilateral regular star‐tree with the Dirichlet boundary conditions at the pendant vertices and Kirchhoff and continuity conditions at the interior vertices is considered. The potential in the Sturm–Liouville equation is a real–valued square summable function, symmetrically distributed with respect to the middle point of any edge. If {λ_j}is a sequence of real numbers, necessary and sufficient conditions for {λ_j}to be the spectrum of the problem under consideration are established. Copyright © 2013 John Wiley & Sons, Ltd.     

A DNA biosensor based on the electrocatalytic oxidation of amine by a threading intercalator

An electrochemical biosensor for the detection of DNA based a peptide nucleic acid (PNA) capture probe (CP) modified indium tin oxide electrode (ITO) is described in this report. After hybridization, a threading intercalator, N,N′-bis[(3-propyl)-imidazole]-1,4,5,8-naphthalene diimide (PIND) imidazole complexed with Ru(bpy)₂Cl (PIND-Ru, bpy = 2,2′-bipyridine), was introduced to the biosensor. PIND-Ru selectively intercalated to double-stranded DNA (ds-DNA) and became immobilized on the biosensor surface. Voltammetric tests showed highly stable and reversible electrochemical oxidation/reduction processes and the peak currents can directly be utilized for DNA quantification. When the tests were conducted in an amine-containing medium, Tris-HCl buffer for example, a remarkable improvement in the voltammetric response and noticeable enhancements of voltammetric and amperometric sensitivities were observed due to the electrocatalytic activity of the [Ru(bpy)₂Cl] redox moieties. Electrocatalytic current was observed when as little as 3.0 attomoles of DNA was present in the sample solution.     

Vibrational interactions in dimethylgold(III) halides and carboxylates

The far-infrared and Raman spectra of binuclear molecules [Me₂AuX]₂ (X = Cl, Br, I) and [Me₂Au(OOCR)]₂ (R = Me, CF₃, Bu^t, Ph) in the 600–70 cm⁻¹ region are reported. The experimentally measured vibrational frequencies of [Me₂AuX]₂ are in a good agreement with density functional theory predictions. The Au…Au vibrational interactions predicted to be in the 270–60 cm⁻¹ region of [Me₂AuX]₂ far-IR and Raman spectra have been observed. The Raman-active Au…Au vibrations of the [Me₂Au(OOCR)]₂ molecules were found to be in the same region as those of [Me₂AuX]₂. The Au–X stretching modes were observed between 100 and 250 cm⁻¹ in accordance with the DFT predictions. Their frequencies in the IR spectra of [Me₂AuX]₂ increase in the sequence I < Br < Cl while the AuC₂ stretching frequencies decrease in the same order. This fact might be an evidence of the decreasing covalent character of the gold-halogen bridges. The Au–O stretching bands of dimethylgold(III) carboxylates have been observed in the 500–250 cm⁻¹ region, and Au–C stretching frequencies of both [Me₂AuX]₂ and [Me₂Au(OOCR)]₂ compounds have been found between 600 and 500 cm⁻¹.     

Collision induced dissociation of protonated N-nitrosodimethylamine by ion trap mass spectrometry: Ultimate carcinogens in gas phase

Collision induced dissociation of protonated N-nitrosodimethylamine (NDMA) and isotopically labeled N-nitrosodimethyl-d6-amine (NDMA-d6) was investigated by sequential ion trap mass spectrometry to establish mechanisms of gas phase reactions leading to intriguing products of this potent carcinogen. The fragmentation of (NDMA + H⁺) occurs via two dissociation pathways. In the alkylation pathway, homolytic cleavage of the N–O bond of N-dimethyl, N′-hydroxydiazenium ion generates N-dimethyldiazenium distonic ion which reacts further by a CH₃ radical loss to form methanediazonium ion. Both methanediazonium ion and its precursor are involved in ion/molecule reactions. Methanediazonium ion showed to be capable of methylating water and methanol molecules in the gas phase of the ion trap and N-dimethyldiazenium distonic ion showed to abstract a hydrogen atom from a solvent molecule. In the denitrosation pathway, a tautomerization of N-dimethyl, N′-hydroxydiazenium ion to N-nitrosodimethylammonium intermediate ion results in radical cleavage of the N–N bond of the intermediate ion to form N-dimethylaminium radical cation which reacts further through α-cleavage to generate N-methylmethylenimmonium ion. Although the reactions of NDMA in the gas phase are different to those for enzymatic conversion of NDMA in biological systems, each activation method generates the same products. We will show that collision induced dissociation of N-nitrosodiethylamine (NDEA) and N-nitrosodipropylamine (NDPA) is also a feasible approach to gain information on formation, stability, and reactivity of alkylating agents originating from NDEA and NDPA. Investigating such biologically relevant, but highly reactive intermediates in the condensed phase is hampered by the short life-times of these transient species.     

Electrodeposition of 3D Ordered Macroporous Germanium from Ionic Liquids: A Feasible Method to Make Photonic Crystals with a High Dielectric Constant

A promising method for the production of germanium photonic crystals consists of electrodeposition of Ge from GeCl₄‐containing ionic liquids inside templates of polystyrene colloidal crystals and subsequent removal of the template. This room‐temperature method gives rise to the fabrication of a three‐dimensional highly ordered macroporous germanium nanostructure (see picture; scale: 2 μm) as a prototype of a photonic crystal.

     

Towards a nondestructive chemical characterization of biofilm matrix by Raman microscopy

In this study, the applicability of Raman microscopy (RM) for nondestructive chemical analysis of biofilm matrix, including microbial constituents and extracellular polymeric substances (EPS), has been assessed. The examination of a wide range of reference samples such as biofilm-specific polysaccharides, proteins, microorganisms, and encapsulated bacteria revealed characteristic frequency regions and specific marker bands for different biofilm constituents. Based on received data, the assignment of Raman bands in spectra of multispecies biofilms was performed. The study of different multispecies biofilms showed that RM can correlate various structural appearances within the biofilm to variations in their chemical composition and provide chemical information about a complex biofilm matrix. The results of RM analysis of biofilms are in good agreement with data obtained by confocal laser scanning microscopy (CLSM). Thus, RM is a promising tool for a label-free chemical characterization of different biofilm constituents. Moreover, the combination of RM with CLSM analysis for the study of biofilms grown under different environmental conditions can provide new insights into the complex structure/function correlations in biofilms.     

Ion-pair high-performance liquid chromatography with diode array detection coupled to dual electrospray atmospheric pressure chemical ionization time-of-flight mass spectrometry for the determination of nucleotides in baby foods

A liquid chromatography with diode array detection coupled to dual electrospray atmospheric pressure chemical ionization time-of-flight mass spectrometry (HPLC/ESI-APCI-TOF-MS) method is described for the rapid determination of five monophosphate nucleotides (cytidine 5′-monophosphate, uridine 5′-monophosphate, adenosine 5′-monophosphate, inosine 5′-monophosphate and guanosine 5′-monophosphate) in baby foods. The method is based on the deproteinisation of foods and direct analysis of nucleotides by ion-pair HPLC using isocratic elution with a mobile phase of 5% (v/v) methanol and 95% (v/v) 0.1 M formate buffer (pH 5.5) containing 0.01 M N,N-dimethylhexylamine (DMHA) at a flow-rate of 0.7 mL min⁻¹. The HPLC was hyphenated with two different detection systems, photodiode-array (DAD) and ESI-APCI-TOF-MS in negative mode. The method was validated for linearity, detection and quantitation limits, selectivity, accuracy and precision. The recoveries obtained for spiked samples were satisfactory for all the analytes. The method was successfully applied to the analysis of nucleotides in different baby and/or functional food samples, as cereals, purees and dairy products. A study was also carried out on the stability of nucleotides in acidified dairy infant food with pasteurized yoghourt and follow-on formulae samples stored at room temperature and at 30 °C.     

Simultaneous determination of Fe, P, Ca, Mg, Zn, and Cu in whole blood by two-jet plasma atomic emission spectrometry

Availability of many biological samples in ample quantity for biomedical investigations sometimes is very restricted. Therefore, there is the need for the simple techniques allowing the analysis of small amount samples. In the present work the two-jet plasma atomic emission spectrometry techniques for the determination of Fe, P, Ca, Mg, Zn, and Cu in whole blood are proposed. The first technique is developed for direct analysis of freeze-dried blood. The sample preparation consisted in a dilution of blood powder (particle size 20 μm or less) with a spectroscopic buffer (graphite powder containing 15 wt.% NaCl). For the analysis of liquid whole blood, previous carbonization (not ashing) of blood evaporated on graphite powder was applied. Calibration samples based on graphite powder containing 15 wt.% NaCl were used. The validation of the techniques was confirmed by the use of different sample preparation procedures (wet acid digestion and dry carbonization), the analysis of IAEA A-13 reference material (freeze-dried bovine whole blood), and the comparison of the results obtained by the proposed technique with the results of the stripping voltammetry technique. Just 20-50 μL of whole blood is quite enough for all determinations. The proposed techniques were successfully applied for the simultaneous determination of Fe, P, Ca, Mg, Zn, and Cu in whole blood of living experimental rats and mice and human blood.     

Diastereoselective lithium salt-assisted 1,3-dipolar cycloaddition of azomethine ylides to the fullerene C60

An efficient method for the diastereoselective synthesis of 5-substituted 3,4-fulleroproline esters based on the lithium salt-assisted cycloaddition of azomethine ylides has been developed. A series of the fulleroproline esters containing either electron donating or electron withdrawing substituents was prepared with high yields and diastereoselectivities provided by the S-trans-configuration of ylide generated in situ from the corresponding Schiff base in the presence of a lithium salt and base. This method provides easy preparation of 3,4-fulleroproline derivatives suitable for fullerene-based peptide synthesis.