Homogeneous ideals in Wick -algebras

The necessary and sufficient condition for the family of homogeneous elements to determine a Wick ideal is presented. The structure of homogeneous Wick ideals with degree higher than 2 is discussed. For the braided operator a formula to calculate the largest cubic ideal when the quadratic one is known is obtained. Irreducible -representations of the -CAR algebra are classified.

     

Probabilistic model applied to ion abundances in product-ion spectra: quantitative analysis of aspartic acid isomerization in peptides

Evaluation of post-translational modifications of protein molecules is important for both basic and applied biomedical research. Mass spectrometric quantitative studies of modifications, which do not change the mass of the protein, such as isomerization of aspartic acid, do not necessarily require the use of isotope-labelled standards. However, the accurate solution of this problem requires a deep understanding of the relationship between the mole fractions of the isomers and the peak intensities in the mass spectra. In previous studies on the isomerization of aspartic acid in short beta-amyloid fragments, it has been shown that calibration curves used for such quantitative studies often have a non-linear form. The reason for the deviation in the shape of the calibration curves from linearity has not yet been established. Here, we propose an explanation for this phenomenon based on a probabilistic model of the fragmentation process and present a general approach for the selection of fragments that can be used for quantitative studies of the degree of isomerization.

Graphical Abstract

     

Densitometric HPTLC Analysis of Aloenin in Aloe Pharmaceuticals

JPC – Journal of Planar Chromatography – Modern TLC - A thin-layer chromatographic method has been established for quantification of aloenin in aloe (Aloe arborescens Mill.)...     

Metal Centers as Nucleophiles: Oxymoron of Halogen Bond-Involving Crystal Engineering

This review highlights recent studies discovering unconventional halogen bonding (HaB) that involves positively charged metal centers. These centers provide their filled d-orbitals for HaB, and thus behave as nucleophilic components toward the noncovalent interaction. This role of some electron-rich transition metal centers can be considered an oxymoron in the sense that the metal is, in most cases, formally cationic; consequently, its electron donor function is unexpected. The importance of Ha⋅⋅⋅d-[M] (Ha=halogen; M is Group 9 (Rh, Ir), 10 (Ni, Pd, Pt), or 11 (Cu, Au)) interactions in crystal engineering is emphasized by showing remarkable examples (reported and uncovered by our processing of the Cambridge Structural Database), where this Ha⋅⋅⋅d-[M] directional interaction guides the formation of solid supramolecular assemblies of different dimensionalities.     

Dihalomethanes as Bent Bifunctional XB/XB‐Donating Building Blocks for Construction of Metal‐involving Halogen Bonded Hexagons

The dihalomethanes CH₂X₂ (X=Cl, Br, I) were co‐crystallized with the isocyanide complexes trans‐[MX^M₂(CNC₆H₄‐4‐X^C)₂] (M=Pd, Pt; X^M=Br, I; X^C=F, Cl, Br) to give an extended series comprising 15 X‐ray structures of isostructural adducts featuring 1D metal‐involving hexagon‐like arrays. In these structures, CH₂X₂ behave as bent bifunctional XB/XB‐donating building blocks, whereas trans‐[MX^M₂(CNC₆H₄‐4‐X^C)₂] act as a linear XB/XB acceptors. Results of DFT calculations indicate that all XCH₂–X???X^M–M contacts are typical noncovalent interactions with estimated strengths in the range of 1.3–3.2 kcal mol^?1. A CCDC search reveals that hexagon‐like arrays are rather common but previously overlooked structural motives for adducts of trans‐bis(halide) complexes and halomethanes.     

Synthesis and characterization of the first azastibatranes and azabismatranes

Syntheses of title compounds, viz. N(CH2CH2NR)3E (1, E = Sb, R = Me; 4, E = Bi, R = Me; 6, E = Sb, R = SiMe3; 8, E = Bi, R = SiMe3), by the reaction of E(NAlk2)3 (3, E = Sb, Alk = Et; 5, E = Bi, Alk = Me) with N(CH2CH2NMeH)3 (2) or N(CH2CH2NSiMe3H)3 (7) are reported. The reactions of SbCl3 with N[CH2CH2N(Me)Li]3 or N[CH2CH2N(SiMe3)Li]3 and BiCl3 with N[CH2CH2N(SiMe3)Li]3 resulted in compounds 1, 6, and 8, respectively. Composition and structures of all novel compounds were established by 1H and 13C NMR spectroscopy and mass spectrometry. The X-ray structural study of 8 clearly indicated the presence of transannular interaction BiNdat in this compound, while 6 possesses a long Sb...Ndat distance. The structural data obtained from geometry optimizations on 6 and 8 reproduce experimental trends, i.e., a decrease in the E-Ndat distance from Sb to Bi. The values of electron density in E-Ndat critical point and the Laplacian of charge density for 8 indicate that a closed-shell interaction exists between the metal atom and Ndat atom.     

Reverse Arene Sandwich Structures Based upon π‐Hole⋅⋅⋅[MII] (d8 M=Pt,Pd) Interactions,where Positively Charged Metal Centers Play the Role of a Nucleophile

The complexes [Pt(tpp)] (H₂tpp=tetraphenylporphyrin), [M(acac)₂] (M=Pd, Pt, Hacac=acetylacetone), and [Pd(ba)₂] (Hba=benzoylacetone) were co‐crystallized with highly electron‐deficient arene systems to form reverse arene sandwich structures built by π‐hole???[M^II] (d⁸M=Pt, Pd) interactions. The adduct [Pt(tpp)]?2 C₆F₆ is monomeric, whereas the diketonate 1:1 adducts form columnar infinity 1D‐stack assembled by simultaneous action of both π‐hole???[M^II] and C???F interactions. The reverse sandwiches are based on noncovalent interactions and calculated ESP distributions indicate that in π‐hole???[M^II] contacts, [M^II] plays the role of a nucleophile.     

Oxa-spirocycles: synthesis,properties and applications

A general approach to a new generation of spirocyclic molecules – oxa-spirocycles – was developed. The key synthetic step was iodocyclization. More than 150 oxa-spirocyclic compounds were prepared. Incorporation of an oxygen atom into the spirocyclic unit dramatically improved water solubility (by up to 40 times) and lowered lipophilicity. More potent oxa-spirocyclic analogues of antihypertensive drug terazosin were synthesized and studied in vivo.

A general practical approach to a new generation of spirocyclic molecules – oxa-spirocycles – is developed.