Experimental and theoretical studies of ammonia decomposition activity on Fe-Pt, Co-Pt, and Cu-Pt bimetallic surfaces

We investigate the decomposition of ammonia on bimetallic surfaces prepared by the deposition of a monolayer of Fe, Co, or Cu on a Pt(111) surface computationally and experimentally. We explore the correlation between predicted activities based on the nitrogen binding energies with experimental decomposition activity on these bimetallic and corresponding monometallic surfaces. Through density functional theory calculations and microkinetic modeling, it is predicted that the Fe-Pt-Pt(111) and Co-Pt-Pt(111) surfaces, with a monolayer of Fe or Co on top of Pt(111), are active toward decomposing ammonia. In contrast, the corresponding subsurface configurations, Pt-Fe-Pt(111) and Pt-Co-Pt(111) are inactive. These predictions were confirmed experimentally through temperature programmed desorption experiments. Decomposition was seen at temperatures below 350 K for the Fe-Pt-Pt(111) and Co-Pt-Pt(111) surfaces. For the Cu∕Pt(111) system, the surface, subsurface and parent metals were each predicted to be inactive, consistent with experiments, further validating the model predictions. The stability of these bimetallic surfaces in the presence of adsorbed nitrogen is also discussed.     

Facile syntheses of novel benzo-1,3-dioxolo-, benzothiazolo-, pyrido-, and quinolino-fused 5H-benzo[d]-pyrazolo[5,1-b][1,3]-oxazines and 1H-pyrazoles

A number of novel benzo-1,3-dioxolo-, benzothiazolo-, pyrido-, and quinolino-fused 5H-benzo[d]pyrazolo[5,1-b][1,3]-oxazines and 1H-pyrazoles were synthesized utilizing an easy and effective N,N-bond forming heterocyclization reaction. In so doing, the substrate scope of this heterocyclization reaction, which starts with o-nitroheterocyclic aldehydes, was expanded to provide several unique heterocyclic compounds for biological screening. This work further demonstrates the versatility of this simple, base-mediated, one-pot heterocyclization method in the construction of novel heterocycles.     

Noninvasive imaging of cell death using an Hsp90 ligand

Cell death plays a central role in normal physiology and in disease. Common to apoptotic and necrotic cell death is the eventual loss of plasma membrane integrity. We have produced a small organoarsenical compound, 4-(N-(S-glutathionylacetyl)amino)phenylarsonous acid, that rapidly accumulates in the cytosol of dying cells coincident with loss of plasma membrane integrity. The compound is retained in the cytosol predominantly by covalent reaction with the 90 kDa heat shock protein (Hsp90), the most abundant molecular chaperone of the eukaryotic cytoplasm. The organoarsenical was tagged with either optical or radioisotope reporting groups to image cell death in cultured cells and in murine tumors ex vivo and in situ. Tumor cell death in mice was noninvasively imaged by SPECT/CT using an (111)In-tagged compound. This versatile compound should enable the imaging of cell death in most experimental settings.     

Ethynyl and Propynylpyrene Inhibitors of Cytochrome P450

Abstract  

The single-crystal X-ray structures and in vivo activities of three aryl acetylenic inhibitors of cytochromes P450 1A1, 1A2, 2A6, and 2B1 have been determined and are reported herein. These are 1-ethynylpyrene, 1-propynylpyrene, and 4-propynylpyrene. To investigate electronic influences on the mechanism of enzyme inhibition, the experimental electron density distribution of 1-ethynylpyrene has been determined using low-temperature X-ray diffraction measurements, and the resulting net atomic charges compared with various theoretical calculations. A total of 82,390 reflections were measured with Mo Kα radiation to a (sinθ/λ)_max = 0.985 Å⁻¹. Averaging symmetry equivalent reflections yielded 8,889 unique reflections. A least squares refinement procedure was used in which multipole parameters were added to describe the distortions of the atomic electron distributions from spherical symmetry. A map of the model electron density distribution of 1-ethynylpyrene was obtained. Net atomic charges calculated from refined monopole population parameters yielded charges that showed that the terminal acetylenic carbon atom (C18) is more negative than the internal carbon (C17). Net atomic charges calculated by ab initio, density functional theory, and semi-empirical methods are consistent with this trend suggesting that the terminal acetylenic carbon atom is more likely to be the site of oxidation. This is consistent with the inhibition mechanism pathway that results in the formation of a reactive ketene intermediate. This is also consistent with assay results that determined that 1-ethynylpyrene acts as a mechanism-based inhibitor of P450s 1A1 and 1A2 and as a reversible inhibitor of P450 2B1. Crystallographic data: 1-ethynylpyrene, C₁₈H₁₀, P2₁/c, a = 14.571(2) Å, b = 3.9094(5) Å, c = 20.242(3) Å, β = 105.042(2)°, V = 1,113.5(2) Å³; 1-propynylpyrene, C₁₉H₁₂, P2₁/n, a = 8.970(2) Å, b = 10.136(1) Å, c = 14.080(3) Å, β = 99.77(2)°, V = 1,261.5(4) Å³; 4-propynylpyrene, C₁₉H₁₂, Pbca, a = 9.904(1) Å, b = 13.174(2) Å, c = 19.401(1) Å, V = 2,531.4(5) Å³.     

The Reaction of Singlet Oxygen with 1,3-Dimethylindole in the Presence of Aldehydes. Formation of 1,2,4-Trioxanes

The dye-sensitized photo-oxygenation of 1,3-dimethylindole in the presence of aldehydes initially generates a zwitterionic peroxide which condenses with the carbonyl function to give the corresponding cis-fused 1,2,4-trioxanes. Acetaldehyde gives a pair of diastereomers, one of whose structures was determined by X-ray analysis (cis,cisisomer), whereas pivaladehyde gives only the cis,cis diastereomer.     

Use of combined mass spectrometry methods for the characterization of a new variant of human hemoglobin: The double mutant hemoglobin villeparisis β77(EF1) His → Tyr, β 80 (EF4) Asn → Ser

Hemoglobin Villeparisis was found during a systematic measurement of glycated hemoglobin. Electrospray mass spectra of the globin indicate an apparently unchanged molecular weight within the error range (0.01%). The tryptic digest of the β chain shows a chromatographically abnormal βT-9 peptide. The mass-to-charge ratio value of its [M+H]⁺ ion, as measured by liquid secondary ionization mass spectrometry, is one mass unit lower than that of the normal βT-9. However, the electrospray mass spectrum of this peptide exhibits mainly a doubly charged ion, whereas the normal βT-9 gives a triply charged ion. None of the allowed single amino acid substitutions for a 1-u shift down (Glu → Gln, Asp → Asn, or Asn → Ile) can explain the suppression of one protonation site. This can be due only to the replacement of the internal histidine by a nonbasic residue. Thus at least two amino acid exchanges occur within the same peptide: one involves the internal histidine, and the sum of the mass shifts is ?1 u. Consideration of the βT-9 sequence and taking account for the genetic code rules, the only possibility was ¹¹His → Tyr (+26 mass shift) associated with ¹⁴Asn → Ser (?27 mass shift). This conclusion was consistent with the tandem mass spectrum of the [M+H]⁺ ion and was further confirmed by chemical microsequencing.     

Intrinsic viscosities of four homopolymers and one copolymer in nonpolar solvents. I. Effect of correlations of molecular orientations

Intrinsic viscosities [η] of four homopolymers, polyisobutylene (PIB), polypentene-1 (PP-1), polypentenamer (PPmer), and polydimethylsiloxane (PDMS), and of an ethylene-propylene copolymer containing 81% ethylene (81% E) have been measured at 25°C in seven linear alkanes ranging from n-C₆ to n-C₁₆ and three highly branched alkanes, 2,2,4-trimethylpentane, 2,2,4,6,6-pentamethylheptane, and 2,2,4,4,6,8,8-heptamethylnonane. Correlation of molecular orientations (CMO) in the polymers was investigated. The difference Δ[η] = [η](lin) ? [η](br) is used as a test of CMO with the supporting assumption that CMO lowers the free energy and the destruction of CMO raises it. The positive value of Δ[η], which varies from 20% to 40% for PPmer and 81% E, is indicative of orientational order in these two polymers. The negative value of Δ[η] for PDMS results from the disordering of linear alkanes by the nonordered PDMS. δ[η] is near zero for PP-1 and small for PIB implying that these two polymers are indifferent to solvent molecular shape. The variation of [η] with alkane chain length of the linear alkanes gives additional information about size and solvent quality. The dependence is small for ordered polymers due to the short range of CMO. [η] diminishes rapidly with n for PDMS probably because of the increased difference of cohesive energy between polymer and solvent. The dependence is small for PIB but very large for PP-1. The much better quality of small-molecule solvents for PP-1 may be an indication of a helicoidal conformation of this polymer in solution.     

The facile synthesis of a large ring lactone by acid-catalysed cyclisation of an (z)-ene-diyne hydroxy acid precursor.

A Large ring lactone is obtained in good yield by acid catalysed cyclisation of the w-hydroxy acid precursor.     

A recommended and verified procedure for in situ tryptic digestion of formalin‐fixed paraffin‐embedded tissues for analysis by matrix‐assisted laser desorption/ionization imaging mass spectrometry

Matrix‐assisted laser desorption/ionization imaging mass spectrometry (MALDI IMS) is a molecular imaging technology uniquely capable of untargeted measurement of proteins, lipids, and metabolites while retaining spatial information about their location in situ. This powerful combination of capabilities has the potential to bring a wealth of knowledge to the field of molecular histology. Translation of this innovative research tool into clinical laboratories requires the development of reliable sample preparation protocols for the analysis of proteins from formalin‐fixed paraffin‐embedded (FFPE) tissues, the standard preservation process in clinical pathology. Although ideal for stained tissue analysis by microscopy, the FFPE process cross‐links, disrupts, or can remove proteins from the tissue, making analysis of the protein content challenging. To date, reported approaches differ widely in process and efficacy. This tutorial presents a strategy derived from systematic testing and optimization of key parameters, for reproducible in situ tryptic digestion of proteins in FFPE tissue and subsequent MALDI IMS analysis. The approach describes a generalized method for FFPE tissues originating from virtually any source.     

Real-time imaging using a 2.8 THz quantum cascade laser and uncooled infrared microbolometer camera

Real-time imaging in the terahertz (THz) spectral range was achieved using a milliwatt-scale, 2.8 THz quantum cascade laser and an uncooled, 160 x 120 pixel microbolometer camera modified with Picarin optics. Noise equivalent temperature difference of the camera in the 1-5 THz frequency range was estimated to be at least 3 K, confirming the need for external THz illumination when imaging in this frequency regime. Despite the appearance of fringe patterns produced by multiple diffraction effects, single-frame and extended video imaging of obscured objects show high-contrast differentiation between metallic and plastic materials, supporting the viability of this imaging approach for use in future security screening applications.