Quantitative proteomics by fluorescent labeling of cysteine residues using a set of two cyanine‐based or three rhodamine‐based dyes

Despite all remarkable progress in gel‐based proteomics in recent years, there is still need to further improve quantification by decreasing the detection limits and increasing the dynamic range. These criteria are achieved best by fluorescent dyes that specifically stain the proteins either by adsorption after gel electrophoresis (in‐gel staining) or covalent coupling prior to gel electrophoresis (in‐solution staining). Here we report a multiplex analysis of protein samples using maleimide‐activated cyanine‐based (Cy3 and Cy5) and rhodamine‐based dyes (Dy505, Dy535, and Dy635) to permanently label all thiol‐groups of cysteine‐containing proteins. The detection limits in SDS‐PAGE were about 10 ng per band and even 2 ng for BSA due to its high content of cysteine residues. Thus only 5 μg protein of a mouse brain homogenate were analyzed by 2‐DE. Both cyanine‐ and rhodamine‐based dyes also stained proteins that did not contain cysteines, probably by reaction with amino groups. This side reactivity did not limit the method and might even extend its general use to proteins missing cysteine residues, but at a lower sensitivity. The dynamic range was more than two orders of magnitude in SDS‐PAGE and the Dy‐fluorophores did not alter the mobility of the tested proteins. Thus, a mixture of Dy505‐, Dy555‐, and Dy635‐labeled Escherichia coli lysates were separated by 2‐DE in a single gel and the three spot patterns relatively quantified.     

Rheology of carbon nanofiber-reinforced polypropylene

The rheological properties of two different nanocomposite systems consisting in the dispersion of carbon nanofibers (CNFs) in polypropylene are investigated. The nanoreinforced systems were identically prepared with two CNFs that differ only in the length of the fibers being otherwise identical to analyze the effect of fiber aspect ratio. Linear dynamic viscoelasticity and the steady-state rheology of the two different nanocomposites are presented. The system reinforced with CNFs with larger aspect ratio shows several rheological features that resemble peculiarities of rodlike polymers in the nematic liquid crystalline phase.     

Coordinatively saturated cyclometallated Pt(IV) azobenzene complexes: synthesis and mesomorphic behaviour

The mesomorphic 4,4-bis[4-n-octyloxybenzoyloxy]azobenzene dinuclear chloro-bridged cycloplatinated complex [(Azo)Pt(mu;-Cl)]2 (smectic C between 263 and 342 C) has been reacted with different chelating ligands, giving rise to a family of square-planar ortho-platinated derivatives, [(Azo)Pt(L)] (L = tropolonate, 8-hydroxyquinolinate and 1,1,1,5,5,5-hexafluoro2,4-pentanedionate). Thermotropic mesomorphism is preserved for these mononuclear complexes which exhibit at least a nematic mesophase and transition temperatures lower by over 100° C than that of the corresponding dimeric precursor. Oxidative addition to the Pt(II) [(Azo)Pt(L)] species of electrophilic substrates such as I₂ or CH₃I eventually led to the corresponding octahedral [(Azo)Pt(L)(I)(X)] products. The introduction of two further ligands leads to Pt(IV) derivatives showing smectic and nematic mesophases for all L ligands. For the hexacoordinated [(Azo)Pt(L)(I)(CH₃)] complexes it has been verified that the oxidative addition of methyl iodide is a thermally reversible process, indicating that these species have potential applications as switchable systems.     

Nanomechanical recognition of N-methylammonium salts

Turning molecular recognition into an effective mechanical response is critical for many applications ranging from molecular motors and responsive materials to sensors. Herein, we demonstrate how the energy of the molecular recognition between a supramolecular host and small alkylammonium salts can be harnessed to perform a nanomechanical task in a univocal way. Nanomechanical Si microcantilevers (MCs) functionalized by a film of tetra-phosphonate cavitands were employed to screen as guests the compounds of the butylammonium chloride series 1-4, which comprises a range of low molecular weight (LMW) molecules (molecular mass < 150 Da) that differ from each other by one or a few N-methyl groups (molecular mass 15 Da). The cavitand surface recognition of each individual guest drove a specific MC bending (from a few to several tens of nanometer), disclosing a direct, label-free, and real-time mean to sort them. The complexation preferences of tetraphosphonate cavitands toward ammonium chloride guests 1-4 were independently assessed by isothermal titration calorimetry. Both direct and displacement binding experiments concurred to define the following binding order in the alkylammonium series: 2 > 3 ≈ 1 ? 4. This trend is consistent with the number of interactions established by each guest with the host. The complementary ITC experiments showed that the host-guest complexation affinity in solution is transferred to the MC bending. These findings were benchmarked by implementing cavitand-functionalized MCs to discriminate sarcosine from glycine in water.     

Structure formation of random isotactic copolymers of propylene and 1-hexene or 1-octene at rapid cooling

The effect of variation the cooling rate in a wide range between 10^?2 and 10³ K s^?1 on solidification the relaxed melt of random isotactic copolymers of propylene with low amount of 1-hexene or 1-octene has been studied. Emphasis has been placed on the structure formation at rapid cooling and an evaluation of the conditions required to permit crystallization, mesophase formation, or suppression of any ordering. The presence of low amount of either 1-hexene or 1-octene co-units in the propylene chain decreases drastically the critical cooling rate required for suppression of crystallization from about 150–200 K s^?1 in the homopolymer to about only 10 K s^?1 in the copolymers; increasing the cooling rate beyond these limits allowed mesophase formation or even generation of fully amorphous samples. The study of the kinetics of formation of specific structures is completed by a complementary analysis of the X-ray structure, morphology and superstructure of the ordered phase. The hindrance of non-isothermal crystallization and mesophase formation of random copolymers of propylene with 1-hexene or 1-octene is compared with that in propylene–1-butene copolymers; addition of only 2–3 mol% 1-hexene or 1-octene into the propylene chain leads to even larger hindrance of the ordering process than the addition of more than 10 mol% 1-butene.