Travelling‐wave ion mobility mass spectrometry and negative ion fragmentation of hybrid and complex N‐glycans

Nitrogen collisional cross sections (CCSs) of hybrid and complex glycans released from the glycoproteins IgG, gp120 (from human immunodeficiency virus), ovalbumin, α1‐acid glycoprotein and thyroglobulin were measured with a travelling‐wave ion mobility mass spectrometer using dextran as the calibrant. The utility of this instrument for isomer separation was also investigated. Some isomers, such as Man₃GlcNAc₃ from chicken ovalbumin and Man₃GlcNAc₃Fuc₁ from thyroglobulin could be partially resolved and identified by their negative ion fragmentation spectra obtained by collision‐induced decomposition (CID). Several other larger glycans, however, although existing as isomers, produced only asymmetric rather than separated arrival time distributions (ATDs). Nevertheless, in these cases, isomers could often be detected by plotting extracted fragment ATDs of diagnostic fragment ions from the negative ion CID spectra obtained in the transfer cell of the Waters Synapt mass spectrometer. Coincidence in the drift times of all fragment ions with an asymmetric ATD profile in this work, and in the related earlier paper on high‐mannose glycans, usually suggested that separations were because of conformers or anomers, whereas symmetrical ATDs of fragments showing differences in drift times indicated isomer separation. Although some significant differences in CCSs were found for the smaller isomeric glycans, the differences found for the larger compounds were usually too small to be analytically useful. Possible correlations between CCSs and structural types were also investigated, and it was found that complex glycans tended to have slightly smaller CCSs than high‐mannose glycans of comparable molecular weight. In addition, biantennary glycans containing a core fucose and/or a bisecting GlcNAc residue fell on different mobility‐m/z trend lines to those glycans not so substituted with both of these substituents contributing to larger CCSs. Copyright © 2016 John Wiley & Sons, Ltd.     

Influence of Chemical Heterogeneity and Nanoscale Roughness on the DLVO Energy Interaction by Spherical Coordinates

In this work, the influence of chemical heterogeneity on the stability of nanocolloidal systems is surveyed with a new method. Zone of influence as a very important parameter for chemical patch surveying is modeled for sphere and flat surface. Surface chemical heterogeneity with specified properties, size, and position are created by spherical coordinate integration method. Rippled sphere model is used to create roughness and the flat surface is created by changing two sphere radius ratio. Using the spherical coordinate system for modeling of surface roughness and chemical heterogeneity is very accurate and fast. Results show that the patches could destabilize the colloidal system at very small sizes. Surface roughness reduces the effect of chemical patches for destabilizing the colloidal system, and with increasing the size of roughness the total DLVO energy interaction increases.     

Reaction parameters influence on the catalytic performance of copper-silica aerogel in the methanol steam reforming

Steam reforming of methanol was carried out on the copper-silica aerogel catalyst.The effects of reaction temperature,feed rate,water to methanol molar ratio and carrier gas flowrate on the H_2 production rate and CO selectivity were investigated.M ethanol conversion was increased considerably in the range of about 240-300,after which it increased at a slightly lower rate.The used feed flowrate,steam to methanol molar ratio and carrier gas flowwere 1.2-9.0 m L/h,1.2-5.0 and 20-80 m L/min,respectively.Reducing the feed flowrate increased the H_2 production rate.It was found that an increase in the water to methanol ratio and decreasing the carrier gas flowrate slightly increases the H2production rate.Increasing the water to methanol ratio causes the lowest temperature in which CO formation was observed to rise,so that for the ratio of 5.0 no CO formation was detected in temperatures lower than 375℃.In all conditions,by approaching the complete conversion,increasing the main product concentration,increasing the temperature and contact time,and decreasing the steam to methanol ratio,the CO selectivity was increased.These results suggested that CO was formed as a secondary product through reverse water-gas shift reaction and did not participate in the methanol steam reforming reaction mechanism.     

99mTc-radiolabeled imidazo[2,1-b]benzothiazole derivatives as potential radiotracers for glioblastoma

This study presents [^99mTc]BPTG-1 and [^99mTc]BPTG-2 for glioblastoma imaging. In vitro cellular uptakes of these radiotracers were examined in SKOV-3, MCF-7, U87-MG, HT-29, and A549 cell lines. U87-MG cell line displayed the highest radiotracers uptakes. Biodistribution study in U87-MG tumor bearing mice revealed higher uptake of radiotracers in tumor than muscle and brain. Liver, intestine, and kidneys displayed the highest radioactivity uptakes. The main route of radiotracers elimination was hepatobiliary. Due to the brain uptake of these radiotracers, they are promising radiotracers for future studies in the diagnosis of glioblastoma.

     

Template Syntheses Involving the Carbon Acid Nitroethane. Synthesis and Characterization of Copper(II) Complexes of a 16-membered Tetraaza Macrocycle

New square-planar Cu(II) complexes of 3,11-dimethyl-3,11-dinitro-1,5,9,13-tetraazacyclohexadecane and 1,11-diamino-6-methyl-6-nitro-4,8-diazaundecane cations have been prepared from the one-pot template condensation of [Cu(pn)₂]²⁺ (pn=1,3-diaminopropane) in MeOH with CH₂O and EtNO₂ in the presence of a noncoordinating base. Reduction of the nitro group in the (3,11-dimethyl-3,11-dinitro-1,5,9,13-tetraazacyclohexadecane)copper(II) cation, may be achieved by Zn/acid reduction. The Cu(II) complex of the reduced form of the ligand, namely (3,11-diammonio-3,11-dimethyl-1,5,9,13-tetraazacyclohexadecane)copper(II), has also characterized. With the macrocyclic ligand, rac and meso isomers have been identified, the meso form being the major product. Elemental analyses, i.r. and u.v.–vis. spectroscopy, f.a.b. mass spectra conductometric, magnetic measurements and cyclic voltammetry have been used to characterize the complexes.     

A green and highly efficient alkylation of thiols in water

An environmentally benign and efficient process for the preparation of thioethers was developed by simple and practical reactions of alkyl halides and thiols in water in the presence of K₂CO₃ or Et₃N in very high yields. The reaction of aryl, alkyl, aliphatic and hindered thiols with various alkyl halides gave the corresponding products with significant advantages such as high conversions, short reaction time, mild reaction conditions, and low cost, simple workup with good to quantitative yields.     

Investigation of novel and reinvestigation of known cyclopentadienylphosphanes: News on [1,5] sigmatropic rearrangements

Ph₂P(C₅HMe₄) (1) was found to undergo a prototropic rearrangement contrary to previous reports. The first detailed investigation of a cyclopentadienylphosphane to undergo such a reaction is presented. One of the two tautomers of 1 which were observed represents the kinetic product, the other one is the thermodynamic product. The two isomers exhibit pronounced differences with respect to their chemical reactivity. Thermodynamic and kinetic data of the isomerisation process were determined. A novel, electron rich cyclopentadienylphosphane, the phosphorus diamide (Me₂N)₂P(C₅HMe₄) (2), was synthesised and was also found to undergo a prototropic rearrangement. The characteristics of the isomerisation process are fully consistent with the findings on 1. The molecular structure of the kinetic product of 2 was established by means of single crystal X-ray diffraction analysis. Me₂P(C₅H₄tBu) (3) is presented as another novel cyclopentadienylphosphane. The mixture of isomers of 3 in thermodynamic equilibrium was investigated in detail with respect to the molecular structures of the tautomers. The results of this study suggested a reinvestigation of the parent compound Ph₂P(C₅H₄tBu) (4) and findings differing from an earlier report in some details are presented.     

Quantum annealing of the graph coloring problem

Quantum annealing extends simulated annealing by introducing artificial quantum fluctuations. The path-integral Monte Carlo version chosen is population-based and designed to be implemented on a classical computer. Its first application to the graph coloring problem is presented in this paper. It is shown by experiments that quantum annealing can outperform classical thermal simulated annealing for this particular problem. Moreover, quantum annealing proved competitive when compared with the best algorithms on most of the difficult instances from the DIMACS benchmarks. The quantum annealing algorithm has even found that the well-known benchmark graph dsjc1000.9 has a chromatic number of at most 222. This is an improvement on its best upper-bound from a large body of literature.