Comparison of luminescence ADP production assay and radiometric scintillation proximity assay for Cdc7 kinase

Several assay technologies have been successfully adapted and used in HTS to screen for protein kinase inhibitors; however, emerging comparative analysis studies report very low hit overlap between the different technologies, which challenges the working assumption that hit identification is not dependent on the assay method of choice. To help address this issue, we performed two screens on the cancer target, Cdc7-Dbf4 heterodimeric protein kinase, using a direct assay detection method measuring [(33)P]-phosphate incorporation into the substrate and an indirect method measuring residual ADP production using luminescence. We conducted the two screens under similar conditions, where in one, we measured [(33)P]-phosphate incorporation using scintillation proximity assay (SPA), and in the other, we detected luminescence signal of the ATP-dependent luciferase after regenerating ATP from residual ADP (LUM). Surprisingly, little or no correlation were observed between the positives identified by the two methods; at a threshold of 30% inhibition, 25 positives were identified in the LUM screen whereas the SPA screen only identified two positives, Tannic acid and Gentian violet, with Tannic acid being common to both. We tested 20 out of the 25 positive compounds in secondary confirmatory study and confirmed 12 compounds including Tannic acid as Cdc7-Dbf4 kinase inhibitors. Gentian violet, which was only positive in the SPA screen, inhibited luminescence detection and categorized as a false positive. This report demonstrates the strong impact in detection format on the success of a screening campaign and the importance of carefully designed confirmatory assays to eliminate those compounds that target the detection part of the assay.     

Structural Diversity of Metallosupramolecular Assemblies from Cu(phen)2+ (phen = 1,10‐Phenanthroline) Building Blocks and 4,4′‐Bipyridine

Attempts to crystal engineer metallosupramolecularcomplexes from Cu(phen)²⁺ building blocks and the prototypical,rod‐like, exo‐bidentate ligand 4,4′‐bipyridine (4,4′‐bipy) by layering techniques are described. Reactions of Cu(phen)²⁺ (phen = 1,10‐phenanthroline) with 4,4′‐bipy in the presence of NO₃^– counterions yielded two distinct, discrete, dinuclear, C_i symmetric, dumbbell‐typecomplexes, [{Cu(NO₃)₂(phen)}₂(4,4′‐bipy)] ( 1 ) and [{Cu(NO₃)(phen)(H₂O)}₂(4,4′‐bipy)](NO₃)₂ ( 2 ), depending upon the mixture of solvents used for crystallization. In compound 1 , a mono‐ and a bidentate nitrato group coordinate to Cu²⁺, whereas in 2 the monodentate nitrato groups are replaced by aqua ligands, which introduce additional hydrogen‐bond donor functionality to the molecule. The crystal structure of 1 was determined by single‐crystal X‐ray analysis at 296 and 110 K. Upon cooling, a disorder‐order transition occurs, with retention of the space group symmetry. The crystal structure of 2 at room temperature was reported previously [Z.‐X. Du, J.‐X. Li, Acta Cryst. 2007 , E63, m2282]. We have redetermined the crystal structure of 2 at 100 K. A phase transition is not observed for 2 , but the low temperature single‐crystal structure determination is of significantly higher precision than the room temperature study. Both 1 and 2 are obtained phase‐pure, as proven by powder X‐ray diffraction of the bulk materials. Crystals of [Cu(phen)(CF₃SO₃)₂(4,4′‐bipy) · 0.5H₂O]_n ( 3 ), a one‐dimensional coordination polymer, were obtained from [Cu(CF₃SO₃)₂(phen)(H₂O)₂] and 4,4′‐bipy. In 3 , Cu(phen)²⁺ corner units are joined by 4,4′‐bipy via the two vacant cis sites to form polymeric zig‐zag chains, which are tightly packed in the crystal. Compounds 1 – 3 were further studied by infrared spectroscopy.     

Synthesis,structure and magnetic properties of unsymmetrical dodecanuclear Mn–Ln clusters

Reaction of manganese acetate and lanthanide nitrates in the presence of excess of PhCOOH affords highly asymmetric dodecanuclear mixed-metal [Mn₁₀Ln₂(OH)(O)₈(PhCOOH)(PhCOO)₁₉] (Ln = Pr^III (1), Nd^III (2)) clusters. The similar reaction, but with only 2 equiv. of PhCOOH resulted in the compounds with higher nuclearity [Mn₁₁Eu₄(O)₈(OH)₈(PhCOO)₁₈(NO₃)₂(H₂O)₆]NO₃ · 4CH₃CN (3). Variable-temperature solid-state magnetic susceptibility of 1 and 2 in the temperature range 1.8–300 K were carried out, and for both complexes antiferromagnetic exchange interactions between the metal centers were observed, giving an estimated S = 17/2 ground state. AC magnetic susceptibility data have revealed out-of-phase signals, which suggest that these complexes exhibit a slow relaxation of magnetization as observed in single-molecule magnets.     

Das Lanthaniodidethanid o‐La5I9(C2) – Die orthorhombische Hochtemperaturmodifikation

The Lanthanumiodideethanide o‐La₅I₉(C₂) – The Orthorhombic High Temperature Modification o‐La₅I₉(C₂) is synthesized by reaction of LaI₃, La metal and graphite powder in sealed Ta containers at 850 °C < T < 900 °C. It crystallizes in the orthorhombic space group Pbca with a = 8.0247(16) Å, b = 16.887(3) Å, c = 35.886(7) Å. o‐Ce₅I₉(C₂) is isotypic with the lattice parameters a = 7.9284(4) Å, b = 16.714(1) Å, c = 35.530(3) Å. o‐La₅I₉(C₂) transforms at 800 °C to the triclinic low temperature modification t‐La₅I₉(C₂). The transformation is reversible. The La atoms form trigonal bipyramids centered by C₂ groups. These units are connected by iodine atoms above the faces (f), edges (e) and corners according to La₅(C₂)I(f)ⁱI(e)^i?i_2/2I(e)^i?a_7/2I(e)^a?i_7/2. The C‐C distance in the C₂ unit is 1.45(2) Å. The crystals with greenish luster are moisture sensitive.     

Seltenerdhalogenide Ln4X5Z. Teil 1: C und/oder C2 in Ln4X5Z

Rare Earth Halides Ln₄X₅Z. Part 1: C and/or C₂ in Ln₄X₅Z The compounds Ln₄X₅C_n (Ln = La, Ce, Pr; X = Br, I and 1.0 < n < 2.0) are prepared by the reaction of LnX₃, Ln metal and graphite in sealed Ta‐ampoules at temperatures 850 °C < T < 1050 °C. They crystallize in the monoclinic space group C2/m. La₄I₅C_1.5: a = 19.849(4) Å, b = 4.1410(8) Å, c = 8.956(2) Å, β = 103.86(3)°, La₄I₅C_2.0: a = 19.907(4) Å, b = 4.1482(8) Å, c = 8.963(2) Å, β = 104.36(3)°, Ce₄Br₅C_1.0: a = 18.306(5) Å, b = 3.9735(6) Å, c = 8.378(2) Å, β=104.91(2)°, Ce₄Br₅C_1.5: a = 18.996(2) Å, b = 3.9310(3) Å, c = 8.282(7) Å, β = 106.74(1)°, Pr₄Br₅C_1.3: a = 18.467(2) Å, b = 3.911(1) Å, c = 8.258(7) Å, β = 105.25(1)° and Pr₄Br₅C_1.5: a = 19.044(2) Å, b = 3.9368(1) Å, c = 8.254(7) Å, β = 106.48(1)°. In the crystal structure the lanthanide metals are connected to Ln₆‐octahedra centered by carbon atoms or C₂‐groups. The Ln₆‐octahedra are condensed via opposite edges to chains and surrounded by X atoms which interconnect the chains. A part n of isolated C‐atoms is substituted by 1‐n C₂‐groups. The C‐C distances range between 1.26 and 1.40Å. In the ionic formulation (Ln³⁺)₄(X^?)₅(C^4?)_n(C₂^m?)_1?n·e^? with 0 < n < 1 and m = 2, 4, 6 (C₂^2?, C₂^4? C₂^6?), there are 1 < e^? < 5 electrons centered in metal‐metal bonds.     

Cs2Hg27, das quecksilberreichste Amalgam – ein naher Verwandter der Bergman‐Phasen

Cs₂Hg₂₇, the Mercury‐richest Amalgam with Close Relationship to the Bergman Phases By electrolyzing a solution of cesium iodide in N,N‐dimethylformamide at 2 °C on a mercury cathode the amalgam Cs₂Hg₂₇ can be synthesized. It crystallizes in an own cubic structure type (space group , a = 16.557(4) Å). The structure can be rationalized by a system of concentrical polyhedral spheres, in close analogy to the Bergman phases.     

The use of 1,2-dipiperidinoacetylene for the preparation of monometallic diaminoacetylene and homo- or heterobimetallic diaminodicarbene ruthenium(II) complexes

The reaction of the ynediamine 1,2-dipiperidinoacetylene (1) with [(η(2)-COE)Cr(CO)(5)], [(THF)W(CO)(5)] and [RuCl(2)(η(6)-cymene)](2) afforded homobimetallic complexes 2a, 2b and 3, in which the diaminoacetylene 1 acts as a bis(aminocarbene) ligand by bridging two complex fragments Cr(CO)(5) (in 2a), W(CO)(5) (in 2b) and RuCl(2)(η(6)-cymene) (in 3). The reaction of 1 with [RuCl(2)(PPh(3))(3)] gave trans-[(1)RuCl(PPh(3))(2)]Cl, [4]Cl, in which the alkyne 1 coordinates as a 4-electron donor ligand. The cation 4 represents a rare example of a square-planar Ru(II) complex with a low-spin ground state (S = 0), and its stability can be ascribed to the strong alkyne-metal π-interaction as confirmed by DFT calculations. Treatment with one or two equivalents of NaBPh(4) in acetonitrile gave [4]BPh(4) and the dicationic [(1)Ru(PPh(3))(2)(CH(3)CN)(2)](BPh(4))(2), [5](BPh(4))(2). [4]Cl can be used for the preparation of heterobimetallic Ru-Pd bis(aminocarbene) complexes by reaction with [(MeCN)(2)PdCl(2)], resulting in the formation of bimetallic 6 and tetrametallic 7.     

Valence isoelectronic substitution in the B8(-) and B9(-) molecular wheels by an Al dopant atom: umbrella-like structures of AlB7(-) and AlB8(-)

The structures and the electronic properties of two aluminum-doped boron clusters, AlB(7)(-) and AlB(8)(-), were investigated using photoelectron spectroscopy and ab initio calculations. The photoelectron spectra of AlB(7)(-) and AlB(8)(-) are both broad, suggesting significant geometry changes between the ground states of the anions and the neutrals. Unbiased global minimum searches were carried out and the calculated vertical electron detachment energies were used to compare with the experimental data. We found that the Al atom does not simply replace a B atom in the parent B(8)(-) and B(9)(-) planar clusters in AlB(7)(-) and AlB(8)(-). Instead, the global minima of the two doped-clusters are of umbrella shapes, featuring an Al atom interacting ionically with a hexagonal and heptagonal pyramidal B(7) (C(6v)) and B(8) (C(7v)) fragment, respectively. These unique umbrella-type structures are understood on the basis of the special stability of the quasi-planar B(7)(3-) and planar B(8)(2-) molecular wheels derived from double aromaticity.     

Functionalization of Intramolecular Frustrated Lewis Pairs by 1,1‐Carboboration with Conjugated Enynes

The vicinal P/B frustrated Lewis pair (FLP) Mes₂PCH₂CH₂B(C₆F₅)₂ undergoes 1,1‐carboboration reactions with the Me₃Si‐substituted enynes to give ring‐enlarged functionalized C₃‐bridged P/B FLPs. These serve as active FLPs in the activation of dihydrogen to give the respective zwitterionic [P]H⁺/[B]H^? products. One such product shows activity as a metal‐free catalyst for the hydrogenation of enamines or a bulky imine. The ring‐enlarged FLPs contain dienylborane functionalities that undergo “bora‐Nazarov”‐type ring‐closing rearrangements upon photolysis. A DFT study had shown that the dienylborane cyclization of such systems itself is endothermic, but a subsequent C₆F₅ migration is very favorable. Furthermore, substituted 2,5‐dihydroborole products are derived from cyclization and C₆F₅ migration from the photolysis reaction. In the case of the six‐membered annulation product, a subsequent stereoisomerization reaction takes place and the resultant compound undergoes a P/B FLP 1,2‐addition reaction with a terminal alkyne with rearrangement.