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81.
82.
Carla Kirschbaum Essa M. Saied Kim Greis Eike Mucha Sandy Gewinner Wieland Schllkopf Gerard Meijer Gert von Helden Berwyck L. J. Poad Stephen J. Blanksby Christoph Arenz Kevin Pagel 《Angewandte Chemie (International ed. in English)》2020,59(32):13638-13642
1‐Deoxysphingolipids are a recently described class of sphingolipids that have been shown to be associated with several disease states including diabetic and hereditary neuropathy. The identification and characterization of 1‐deoxysphingolipids and their metabolites is therefore highly important. However, exact structure determination requires a combination of sophisticated analytical techniques due to the presence of various isomers, such as ketone/alkenol isomers, carbon–carbon double‐bond (C=C) isomers and hydroxylation regioisomers. Here we demonstrate that cryogenic gas‐phase infrared (IR) spectroscopy of ionized 1‐deoxysphingolipids enables the identification and differentiation of isomers by their unique spectroscopic fingerprints. In particular, C=C bond positions and stereochemical configurations can be distinguished by specific interactions between the charged amine and the double bond. The results demonstrate the power of gas‐phase IR spectroscopy to overcome the challenge of isomer resolution in conventional mass spectrometry and pave the way for deeper analysis of the lipidome. 相似文献
83.
Felix Nußbaumer Raphael Plangger Manuel Roeck Christoph Kreutz 《Angewandte Chemie (International ed. in English)》2020,59(39):17062-17069
We present the access to [5‐19F, 5‐13C]‐uridine and ‐cytidine phosphoramidites for the production of site‐specifically modified RNAs up to 65 nucleotides (nts). The amidites were used to introduce [5‐19F, 5‐13C]‐pyrimidine labels into five RNAs—the 30 nt human immunodeficiency virus trans activation response (HIV TAR) 2 RNA, the 61 nt human hepatitis B virus ? (hHBV ?) RNA, the 49 nt SAM VI riboswitch aptamer domain from B. angulatum, the 29 nt apical stem loop of the pre‐microRNA (miRNA) 21 and the 59 nt full length pre‐miRNA 21. The main stimulus to introduce the aromatic 19F–13C‐spin topology into RNA comes from a work of Boeszoermenyi et al., in which the dipole‐dipole interaction and the chemical shift anisotropy relaxation mechanisms cancel each other leading to advantageous TROSY properties shown for aromatic protein sidechains. This aromatic 13C–19F labeling scheme is now transferred to RNA. We provide a protocol for the resonance assignment by solid phase synthesis based on diluted [5‐19F, 5‐13C]/[5‐19F] pyrimidine labeling. For the 61 nt hHBV ? we find a beneficial 19F–13C TROSY enhancement, which should be even more pronounced in larger RNAs and will facilitate the NMR studies of larger RNAs. The [19F, 13C]‐labeling of the SAM VI aptamer domain and the pre‐miRNA 21 further opens the possibility to use the biorthogonal stable isotope reporter nuclei in in vivo NMR to observe ligand binding and microRNA processing in a biological relevant setting. 相似文献
84.
Christoph Bttcher Edda von Roepenack‐Lahaye Jürgen Schmidt Stephan Clemens Dierk Scheel 《Journal of mass spectrometry : JMS》2009,44(4):466-476
Total phenolic choline ester fractions prepared from seeds of Arabidopsis thaliana and Brassica napus were analyzed by capillary LC/ESI‐QTOF‐MS and direct infusion ESI‐FTICR‐MS. In addition to the dominating sinapoylcholine, 30 phenolic choline esters could be identified based on accurate mass measurements, interpretation of collision‐induced dissociation (CID) mass spectra, and synthesis of selected representatives. The compounds identified so far include substituted hydroxycinnamoyl‐ and hydroxybenzoylcholines, respective monohexosides as well as oxidative coupling products of phenolic choline esters and monolignols. Phenolic choline esters are well separable by reversed‐phase liquid chromatography and sensitively detectable using electrospray ionization mass spectrometry in positive ion mode. CID mass spectra obtained from molecular ions facilitate the characterization of both the type and substitution pattern of such compounds. Therefore, LC/ESI‐MS/MS represents a valuable tool for comprehensive qualitative and quantitative analysis of this compound class. Copyright © 2008 John Wiley & Sons, Ltd. 相似文献
85.
Yoshihiko Katayama Dr. Ondrej Burkacky Dr. Martin Meyer Dr. Christoph Bräuchle Prof. Enrico Gratton Prof. Don C. Lamb Prof. 《Chemphyschem》2009,10(14):2458-2464
We developed a new method for real‐time, three‐dimensional tracking of fluorescent particles. The instrument is based on a laser‐scanning confocal microscope where the focus of the laser beam is scanned or orbited around the particle. Two confocal pinholes are used to simultaneously monitor regions immediately above and below the particle and a feedback loop is used to keep the orbit centered on the particle. For moderate count rates, this system can track particles with 15 nm spatial resolution in the lateral dimensions and 50 nm in the axial dimension at a temporal resolution of 32 ms. To investigate the interaction of the tracked particles with cellular components, we have combined our orbital tracking microscope with a dual‐color, wide‐field setup. Dual‐color fluorescence wide‐field images are recorded simultaneously in the same image plane as the particle being tracked. The functionality of the system was demonstrated by tracking fluorescent‐labeled artificial viruses in tubulin‐eGFP expressing HUH7 cells. The resulting trajectories can be used to investigate the microtubule network with super resolution. 相似文献
86.
Higelin A Haber C Meier S Krossing I 《Dalton transactions (Cambridge, England : 2003)》2012,41(39):12011-12015
The recently reported homologous low-valent indium and gallium salts M(+)[Al(OR(F))(4)](-) (M = Ga, In; R(F) = C(CF(3))(3)) were used to extend the coordination chemistry of Ga(I) and In(I) to the isolated [18]crown-6 complexes [M([18]crown-6)(PhF)(2)](+)[Al(OR(F))(4)](-) in fluorobenzene solution (PhF = C(6)H(5)F). In contrast to known ion-paired compounds for M = In, our complexes are undisturbed and in the solid state free of contacts to the anion. A peculiar combination of very weak η(1)- and η(6)-coordination to the PhF-solvent was observed that allows speculation about the presence of a stereochemically active lone pair at M(I). Structure and energetics of these novel salts were rationalized on the basis of DFT calculations. 相似文献
87.
Anamika Das Christoph Marschner Joan Cano Judith Baumgartner Joan Ribas M. Salah El Fallah Samiran Mitra 《Polyhedron》2009
Two new dicyanamido-bridged di- and polynuclear complexes of Co(II), [Co(dca)(tptz)(H2O)]2·2(ClO4) (1) and [Co(dca)2(imz)2]n (2) [dca, dicyanamide; tptz, 2,4,6-tris(2-pyridyl)1,3,5-triazine; and imz, imidazole] have been synthesized and characterized structurally, as well as magnetically. The X-ray single crystal structure determination of complex 1 shows that two symmetry related octahedral Co(II) ions are separated by dca ligand and other coordination sites are satisfied by tptz and aquo ligands. Each dinuclear unit is associated with each other by intramolecular hydrogen bonding interactions, giving rise to a 1D chain structure. On the other hand complex 2 is a 1D coordination polymer having [Co(II)(imz)2] units connected by double bridging dca ligands. These 1D chains interact through face-to-face π–π stacking interactions of the imz rings extending the dimensionality to a 2D supramolecular network. The variable temperature (300–2 K) magnetic measurements of both compounds reveal that dicyanamide exhibits a weak antiferromagnetic interaction between the metal centers. 相似文献
88.
Schmidt H Böttcher C Trampczynska A Clemens S 《Analytical and bioanalytical chemistry》2011,399(3):1355-1361
Nicotianamine (NA) is an important metal chelator, implicated in the intra- and intercellular trafficking of several transition
metal ions in plants. To decipher its roles in physiological processes such as micronutrient acquisition, distribution or
storage, fast and sensitive analytical techniques for quantification of this non-proteinogenic amino acid will be required.
The use of a recombinant Schizosaccharomyces pombe strain expressing a nicotianamine synthase (NAS) gene allowed for the production of [15N3]-NA, which was enriched from cell extracts through cation exchange and used for stable isotope dilution analysis of NA. Such
an approach should be widely applicable to important bioanalytes that are difficult to synthesize. The analytical procedure
comprises mild aqueous extraction and rapid Fmoc derivatization, followed by fast separation using ultra-performance liquid
chromatography (UPLC) and sensitive detection by positive ion electrospray ionization time-of-flight mass spectrometry (ESI-TOF-MS)
with a chromatographic cycle time of only 8 min. Derivatization was optimized with respect to incubation time and species
suitable for quantification. The limit of detection was 0.14 to 0.23 pmol in biological matrices with the response being linear
up to 42 pmol. Recovery rates were between 83% and 104% in various biological matrices including fission yeast cells, fungal
mycelium, plant leaves and roots. 相似文献
89.
Christoph Logé Alexander Bornschlegl Ulrich Boesl 《Analytical and bioanalytical chemistry》2009,395(6):1631-1639
Circular dichroism in ion yield has promising new potentials for chiral analysis. Our progress of its development is described
here. Circular dichroism in ion yield is achieved by resonance-enhanced multiphoton ionization. The feasibility of circular
dichroism spectroscopy and quantitative determination of circular dichroism by this method is demonstrated. Several excitation
schemes have been applied using different types of lasers, which vary in wavelength and repetition rate. Progress to improve
the statistical error and thus the lower limit of measurable circular dichroism is described. This is achieved by adding achiral
compounds or racemic mixtures of chiral compounds to the sample gas as reference substances and ionizing them by the same
laser pulse. Therefore, in the mass spectrum of every single laser pulse, ion signals of sample and reference species appear
both being subject to the same kind of instrumental fluctuations (in particular of laser pulse energy). In another approach,
a laser repetition rate of 200 Hz allowed averaging of large numbers of laser pulses.
相似文献
90.
Hassan Hosseini Monfared Azar Mohajeri Ali Morsali Christoph Janiak 《Monatshefte für Chemie / Chemical Monthly》2009,17(1):1437-1445