Theoretical conformational study of six-membered cyclic allyl epoxides

Accurate “ab initio” calculations (MP2 method) were performed to outline the conformational profile of a number of six-membered cyclic allyl epoxides differing either in the nature of the cycle fragment (Y) bound to the unsaturation, or in the substitution at the endocyclic carbon bound to the epoxy ring and bridging the epoxy ring with the Y fragment. In particular, we calculated structures 4 (Y=CH₂), 5 (Y=O), 6 (Y=NH), 7 (Y=S), 8 (Y=CF₂), 9 (Y=NH₂ ⁺), 10 (Y=CO), 11 (Y=BH) and 12 (Y=NCOOH), where the fragment of the endocyclic carbon bridging “Y” and the epoxy fragment is either non-substituted (4a – 12a) or bears a methyl side chain trans (4b–12b) or cis (4c–12c) to the epoxidic oxygen. Saturated analogs (Y=O and Y=CH₂) were also computed to test the method and to evaluate the conformational profile in the absence of the unsaturation. Minimum energy conformations were found which differ in the relative position of the Y group and the epoxy oxygen, with respect to a plane containing the epoxy ring carbons and the adjacent saturated endocyclic carbon: they may be on the same side (conformer A) or on opposite sides (conformer B). Conformers A are generally more stable. The conjugation effect of Y with the double bond lowers the barrier between the two conformers to the extent that in a few cases only conformer A is associated with a minimum of energy. On the basis of the elongation of the allylic oxirane C–O bond, we postulated the order of reactivity of epoxides 4–12 in the oxirane ring-opening process, and a mechanism based on the more reactive conformer A. A comparison was also made between MP2 and DFT calculation methods.     

Vibrational and high pressure conformational studies of 1,1,2-trichloroethane

The infrared spectra of 1,1,2-trichloroethane were recorded from 4000 to 50 cm^?1 in the vapour and liquid states. Additional spectra above 200 cm^?1 of the low temperature crystal and of two crystalline solids, prepared by compressing the sample in a diamond anvil cell, were obtained. Also, infrared spectra of the liquid and of the compound dissolved in CS₂ were recorded at increased pressures. Raman spectral data of the liquid (including polarization measurements) and of the low temperature crystal were obtained.The fundamental frequencies for each of the two conformers, C₁ and C_s, were assigned and the results checked by normal coordinate analysis. The same diagonal and off-diagonal force constants were employed for the two conformers and the force fields were derived by means of a least squares refinement, including data for chloroethane, 1,1-dichloroethane and various deuterated species. A standard deviation of 3 % was obtained in the final fit.From the changes in relative intensities for infrared bands belonging to the C₁ and C_s conformers with increasing pressure, the volume differences (ΔV¯between the conformers were determined in CS₂ solution and in the pure liquid.     

Optical waveguides for the evanescent wave-induced cleavage of photolabile linker compounds

Functional surfaces and especially the control of surface properties depending on external parameters such as light illumination have gained increasing importance in the last few years. We present the characterization of polymers from the cycloolefin (co)polymer class (COC/COP) functionalized with an aminosilane as a basis for the further immobilization of compounds. In a first step, an assay using AlexaFluor?647 fluorescent dye was used to assess surface homogeneity and reproducibility. A coefficient of variation of less than 15% for dot-to-dot and less than 25% for chip-to-chip could be achieved. The same amino-functionalized surfaces were then used to immobilize a biotinylated photolabile linker compound, binding AlexaFluor?647-labeled streptavidin. The linker was photocleaved with high efficiency at λ = 365 nm and P = 0.15 mW/cm². Fluorescence measurements show that polymers of the COC/COP class can be used as versatile surfaces for the photoinduced release of compounds immobilized via photolabile linkers.     

A unique transition metal-stabilized silicon cation

Trivalent silicon cations are exceptionally strong electron pair acceptors that react, either desired or undesired, with almost any σ and π basic molecule. One way of intramolecular attenuation of the Lewis acidity of these superelectrophiles is by installation of a ferrocene unit at the electron-deficient silicon atom. While well-understood for isoelectronic α-ferrocenyl-substituted carbenium ions and also boranes, the stabilizing interactions between the ferrocene backbone and a positively charged silicon atom are not clear due to the challenge of crystallizing such cations. The structural characterization of our ferrocene-stabilized silicon cation now reveals an unprecedented bonding motif different from its analogues. An extreme dip angle of the silicon atom toward the iron atom is explained by two three-center-two-electron (3c2e) bonds through participation of both the upper and the lower aromatic rings of the ferrocene sandwich structure. The positive charge is still localized at the silicon atom that also retains a quasi-planar configuration.     

Interfacing strong electron acceptors with single wall carbon nanotubes

The complementary use of steady-state and time-resolved spectroscopy in combination with electrochemistry and microscopy are indicative of mutual interactions between semiconducting SWNTs and a water-soluble strong electron acceptor, i.e., perylenediimide. Significant is the stability and the strong electronic coupling of the perylenediimide/SWNT electron donor-acceptor hybrids. Several spectroscopic and spectroelectrochemical techniques, i.e., Raman, absorption, and fluorescence, confirmed that distinct ground- and excited-state interactions occur and that kinetically and spectroscopically well characterized radical ion pair states form within a few picoseconds.     

Galactose Oxidase models: 19F NMR as a powerful tool to study the solution chemistry of tripodal ligands in the presence of copper(II)

In copper(ii) complexes of tripodal ligands, the protonation state of the phenol moiety, and its position (axial vs. equatorial), are easily assessed by (19)F NMR.     

Self‐initiation of the UV photopolymerization of brominated acrylates

Brominated aromatic acrylates were found to polymerize rapidly upon exposure to UV light. Moreover, they are able to initiate the UV‐induced polymerization of acrylic formulations that do not contain a conventional photoinitiator. In contrast, the corresponding unbrominated homologues are not effective as initiators. Investigations by real‐time FTIR spectroscopy have shown that the addition of only 1 wt % of a brominated acrylate is sufficient for an efficient initiation. Fast photopolymerization is achieved even if irradiation is carried out at λ > 300 nm where most acrylates do not absorb. Short‐lived transients were studied by laser flash photolysis. The triplet was found to show low sensitivity to oxygen which is because of its very short lifetime. Bromine radicals split of from the acrylates were trapped with bromine ions from tetraethyl ammonium bromide and detected as Br. The resulting quantum yields for the formation of bromine radicals are in the range of up to 0.3. Quantum chemical modeling was carried out to establish a mechanism for the release of bromine radicals. Both bromine and bromophenyl radicals are able to initiate the polymerization reaction. © 2008 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 46: 4905–4916, 2008     

Indium(III) one-dimensional polymers with pyrazine and pyrazine, 2-carboxylic acid as the spacer molecules

The reactions of indium(III) chloride tetrahydrate with pyrazine (C₄H₄N₂) and pyrazine, 2-carboxylic acid afford two polymeric frameworks, the structures of which were characterized in the solid state by single crystal analysis. The former is a one-dimensional infinite structure interlinked by the pyrazine spacer, while the latter is a one-dimensional ‘zigzag’ polymeric structure. A dimeric indium(III) pyrazine complex is also reported.