Complexation Studies of Phosphorus Containing Bis and Tris (Benzocrown Ether) Moieties

The complexation behaviour between salts of Li⁺-Rb⁺ in CD₃CN and tris(benzocrown ether)s 2a,bX=P(NMeN=CH-B15C5)₃ (X = O, S) and tri[bis(benzocrown ether)][N=P(NMeN=CH-B15C5)₂]₃ 3 was investigated by ¹³ C NMR spectroscopy. Using the program RMNSTAB, the complexation constants for the different possible complexes (M₂L, ML andML₂ were L represents one benzo-15-crown-5) were obtained and were compared with those of the corresponding monomer material. A remarkable ``biscrown effect' for compounds 2a,b and 3 was found, especially for potassium and rubidium by the predominant formation of stable ML₂ complexes. The strong chelate effect make these ligands highly efficient extracting agents for alkali metal picrate salts of K⁺, Rb⁺ and Cs⁺,as shown by UV-Vis spectroscopy.     

Fully validated assay for the quantification of endogenous nucleoside mono- and triphosphates using online extraction coupled with liquid chromatography–tandem mass spectrometry

An analytical method coupling online solid-phase extraction (SPE) and liquid chromatography–tandem mass spectrometry (LC-MS/MS) was developed to quantify 16 endogenous nucleoside mono- and triphosphates in cellular samples. Separation was achieved on a porous graphitic carbon (PGC) column without ion-pairing agent in the mobile phase. Low levels of the ion-pairing agent diethylamine (DEA) added to the reconstitution solution were necessary to prevent peak tailing of nucleoside triphosphates. The mass spectrometer, a triple quadrupole with an electrospray ionisation source, was operated in positive mode. Two multiple reaction monitoring (MRM) segments were programmed, each an internal standard. Extraction and separation of nucleoside mono- and triphosphates were obtained within 20 min. The total duration of a single run was 37 min. Calibration curves, performed with labelled nucleotides added to the sample matrix, ranged from 0.29 to 18.8 pmol injected for deoxyribonucleotides and from 3.9 to 3,156 pmol for ribonucleotides. Accuracy did not deviate more than ?14.6 and 10.2 % from nominal values for all compounds at all levels. CV results were all lower than 17.0 % for the LLOQ level and 14.6 % for the other levels. Quality control (QC) samples were also in agreement with acceptance criteria, except for the lower QC of GMP. Ion suppression, matrix effect, extraction recoveries and stability were assessed. After validation, the method was applied to the evaluation of the effects of gemcitabine and hydroxyurea on nucleotide pools in Messa cells.     

Semi‐Covalent Surface Molecular Imprinting of Polymers by One‐Stage Mini‐emulsion Polymerization: Glucopyranoside as a Model Analyte

This paper describes a new type of surface imprinting technique that combines the advantages of both the semi‐covalent approach and one‐stage miniemulsion polymerization. This process has been successfully applied for the preparation of glucose surface‐imprinted nanoparticles. The selective artificial receptors for glucopyranoside were fully characterized by IR, TEM and BET analyses, and their molecular recognition abilities by binding experiments carried out in batch processes. The molecular affinity and selectivity of the glucose molecularly imprinted polymers were accurately quantified. These characteristics are essential for verification of the efficiency of the developed surface imprinting process. The imprinting effect was clearly demonstrated using the batch rebinding method. We have found that the glucose imprinted polymers produced using the optimized one‐stage mini‐emulsion exhibited quite fast kinetics of binding and equilibration with glucopyranoside templates, compared to polymers prepared by bulk polymerization technique, as well as extremely low levels of unspecific bindings. We also demonstrated that glucose molecular imprinted polymer (MIP) exhibited very good selectivity for its original template compared to other glycopyranoside derivatives, such as galactose. Finally, the extraction of the binding properties from isotherms of binding by fitting to the bi‐Langmuir and Freundlich models allowed the determination of the affinity constant distribution of the binding sites. This imprinting protocol allowed the determination of an affinity constant (K_D), involving exclusively H‐bonding interactions, for the glucose MIP ( P2C ) with the best template 1 , in CH₃CN as the solvent system.

     

Development of a metabonomic approach based on LC-ESI-HRMS measurements for profiling of metabolic changes induced by recombinant equine growth hormone in horse urine

Despite the worldwide existing regulation banning the use of the recombinant equine growth hormone (reGH) as growth promoter, it is suspected to be used in horseracing to improve performances. Various analytical methods previously developed to screen for its misuse have encountered some limitations in terms of detection timeframes, in particular during the first days following reGH administration. A novel strategy involving the characterization of global metabolomic fingerprints in urine samples of non-treated and reGH-treated horses by liquid chromatography–electrospray–high-resolution mass spectrometry (LC-ESI-HRMS) is described and assessed in this paper in order to develop a new screening tool for growth hormone abuse in horseracing. The strategy involves a limited sample preparation of the urine samples and the use of appropriate software for data processing and analysis. As preliminary work, reproducibility of both sample preparation and mass spectrometry (MS) measurements was evaluated in order to demonstrate the reliability of the method. Application of the developed protocol on two horses demonstrated the suitability of the developed strategy and preliminary results showed significant modifications of the metabolome after treatment with reGH.       

New technologies in affinity assays to explore biological communication

The language that cells use to communicate consists of the small molecules, peptides, and proteins that are released into the extracellular environment. To decipher this language, analytical assays are needed that have high selectivity, high sensitivity, and fast temporal resolution. Affinity assays are a group of analytical methodologies that are adept at studying this communication. In this overview, we highlight several examples from the literature on various types of affinity assays used in different platforms to monitor biological communication of peptides and proteins.     

Cell-permeant small-molecule modulators of NAADP-mediated Ca2+ release

Nicotinic acid adenine dinucleotide phosphate (NAADP, 1) is the most potent intracellular Ca2+ mobilizing agent in important mammalian cells and tissues, yet the identity of the NAADP receptor is elusive. Significantly, the coenzyme NADP is completely inactive in this respect. Current studies are restricted by the paucity of any chemical probes beyond NAADP itself, and importantly, none is cell permeant. We report simple nicotinic acid-derived pyridinium analogs as low molecular weight compounds that (1) inhibit Ca2+ release via the NAADP receptor (IC50 approximately 15 microM - 1 mM), (2) compete with NAADP binding, (3) cross the cell membrane of sea urchin eggs to inhibit NAADP-evoked Ca2+ release, and (4) selectively ablate NAADP-dependent Ca2+ oscillations induced by the external gastric peptide hormone agonist cholecystokinin (CCK) in murine pancreatic acinar cells.     

Optimization of the capacity of wireless mesh networks

This is a summary of the authors PhD thesis supervised by Hervé Rivano and defended on 29 October 2009 at the Université de Nice-Sophia Antipolis. The thesis is written in French and is available from . This work deals with the optimization of the capacity of wireless mesh networks, defined as the throughput offered to each flow. We develop optimization models integrating the cross-layer characteristics of radio communications. The joint routing and scheduling is studied and solved using column generation. A linear formulation focusing on the transport capacity available on the network cuts is derived. We prove the equivalence of the models, and adapt the resolution method into a cross line and column generation process. Thorough tests, a contention area located around the gateways which constraints the capacity is highlighted. These results are applied to a quantitative study of the effects of acknowledgments on the capacity. Finally, a stability study of a protocol routing a traffic injected arbitrarily is investigated.     

From the dilute solution to the pure compound: Extraction strategy based on a multi-stage process of phase separation

It is very rare that a one-step process of extraction leads to the pure compound with a high degree of purity specified by an industrial application. The various stages of a synthesis process and possible secondary reactions may lead to the synthesis of more or less complex and highly diluted solutions. In this work, the rationale and strategy for extraction and purification of a high added value compound are discussed. All the thinking is based on the knowledge and the exploitation of phase diagrams and then developed for different unit operations of the process. The most significant research tools are the experimental data and the modelling of phase equilibrium to estimate the yield of each step of extraction. The significant example chosen involves all the basic methods of phase separation, starting with liquid-vapour equilibrium: stripping of high volatility components and then more or less complex distillation are classically employed. The theoretical plateau number can be deduced from the equilibrium equation curves. The second step is based on the study of the liquid-liquid equilibrium and is an intermediate step for enrichment of the solution when distillation is not possible. A final step based on solid-liquid equilibrium consists of the selective crystallization of the pure product at low temperature, in order to satisfy the requirements of purity and safety imposed by industrial use. The conclusion includes all isolation operations in the form of a general extraction and purification scheme.

     

Hepcidin in iron metabolism

Hepcidin, which has been recently identified both by biochemical and genomic approaches, is a 25 amino acid polypeptide synthesized mainly by hepatocytes and secreted into the plasma. Besides its potential activity in antimicrobial defense, hepcidin plays a major role in iron metabolism. It controls two key steps of iron bioavailability, likely through a hormonal action: digestive iron absorption by enterocytes and iron recycling by macrophages. In humans, this could explain that low levels of hepcidin found during juvenile haemochromatosis and HFE-1 genetic haemochromatosis are associated with an iron overload phenotype. Conversely, an increase of hepcidin expression is suspected to play a major role in the development of anemia of chronic inflammatory diseases. However, the regulatory mechanisms of hepcidin expression are multiple, including iron-related parameters, anemia, hypoxia, inflammation and hepatocyte function. Therefore, many physiological and pathological situations may modulate hepcidin expression and subsequently iron metabolism. A better knowledge of the biological effects of hepcidin and of its expression regulatory mechanisms will clarify the place of hepcidin in the diagnosis and treatment of iron-related diseases.