Molecular dynamics simulations,docking and MMGBSA studies of newly designed peptide-conjugated glucosyloxy stilbene derivatives with tumor cell receptors

Molecular Diversity - In this work, for the first time, we designed derivatives of beta-D-glucosyloxy-3-hydroxy-trans-stiblene-2-carboxylic acid (GHS), by conjugating GHS with tumor targeting...     

Properties of superhydrophobic paper treated with rapid expansion of supercritical CO<Subscript>2</Subscript> containing a crystallizing wax

Paper samples were rendered superhydrophobic with Alkyl Ketene Dimer using (1) Airblasting with cryo ground micro particles, (2) crystallizing from organic solvents and (3) spraying with Rapid Expansion of Supercritical Solutions (RESS) technique. The papers were characterized using Scanning Electron Microscopy, contact angle to water measurements and X-ray Photoelectron Spectroscopy (XPS). Advancing contact angles were in the region of 150°–160° and receding contact angles were in the region of 110°–130°. Diagrams showing the drop base diameter vs. the contact angle when water is pumped into, and then withdrawn from, a sessile drop show that a stick slip pattern is present in the advancing phase for a non coated internally sized paper. Papers rendered superhydrophobic with the RESS technique showed a much less pronounced stick slip pattern in the advancing phase but still a stick slip pattern in the receding phase.     

Selected uses of enzymes with critical fluids in analytical chemistry

The use of enzymes coupled with supercritical fluid (SF)-based analytical techniques, such as supercritical fluid extraction (SFE), provides a safer environment platform for the analytical chemist and reduces the use of organic solvents. Incorporation of such techniques not only reduces the use of solvent in analytical laboratories, but it can also lead to overall method simplification and time savings. In this review, some of the fundamental aspects of using enzymes in the presence of SF media are discussed, particularly the influence of extraction (reaction) pressure, temperature, and water content of the extracting fluid and/or the sample matrix. Screening of optimal conditions for conducting reactions in the presence of SF media can be readily accomplished with automated serial or parallel SFE instrumentation, including selection of the proper enzyme. Numerous examples are cited, many based on lipase-initiated conversions of lipid substrates, to form useful analytical derivatives for gas chromatography, liquid chromatography, or SF chromatography analysis. In certain cases, enzymatic-aided processing of samples can permit the coupling of the extraction, sample preparation, and final analysis steps. The derived methods/techniques find application in nutritional food analyses, assays of industrial products, and micro analyses of specific samples.     

Parallel synthesis of an indole-based library via an iterative Mannich reaction sequence

A library of 1,3-disubstituted indoles has been prepared via an iterative Mannich reaction sequence. The first Mannich reaction with secondary amines and formaldehyde preferentially yields 3-aminomethyl indoles, while the second Mannich reaction introduces an additional aminomethyl group at the N1-position of the indole ring. A library of 25 substituted indoles has thus been prepared in moderate to good yields with purity.     

Pressurised hot water extraction in continuous flow mode for thermolabile compounds: extraction of polyphenols in red onions

Extraction and analysis of labile compounds in complex sample matrices, such as plants, is often a big analytical challenge. In this work, the use of a “green and clean” pressurised hot water extraction (PHWE) approach performed in continuous flow mode is explored. Experimental data for extraction and degradation kinetics of selected compounds were utilised to develop a continuous flow extraction (CFE) method targeting thermolabile polyphenols in red onions, with detection by high-performance liquid chromatography (HPLC)–diode array detection (DAD)–mass spectrometry (MS). Water containing ethanol and formic acid was used as extraction solvent. Method performance was focused on extraction yield with minimal analyte degradation. By adjusting the flow rate of the extraction solvent, degradation effects were minimised, and complete extraction could be achieved within 60 min. The CFE extraction yields of the polyphenols investigated were 80–90 % of the theoretically calculated quantitative yields and were significantly higher than the yields obtained by conventional methanol extraction and static batch extraction (70–79 and 58–67 % of the theoretical yields, respectively). The precision of the developed method was lower than 8 % expressed as relative standard deviation.

Pressurized solvent extraction and monolithic column-HPLC/DAD analysis of anthocyanins in red cabbage

The aim of this work was to develop a fast method for extraction and analysis of anthocyanins in red cabbage. Pressurized hot water containing 5% of ethanol was used as an extremely efficient extraction solvent. HPLC/DAD with a monolithic column was used to accomplish a fast analysis—24 anthocyanin peaks within 18 min. Statistical design was used to optimize the studied extraction parameters: temperature (80–120 °C); sample amount (1–3 g); extraction time (6–11 min); concentration of formic acid in the extraction solvent (0–5 vol.%). The best extraction conditions for a majority of the anthocyanin peaks were 2.5 g of sample, 99 °C (at 50 bar), 7 min of extraction and a solvent composition of water/ethanol/formic acid (94/5/1, v/v/v).     

Ultra‐high performance supercritical fluid chromatography of lignin‐derived phenols from alkaline cupric oxide oxidation

Traditional chromatographic methods for the analysis of lignin‐derived phenolic compounds in environmental samples are generally time consuming. In this work, an ultra‐high performance supercritical fluid chromatography method with a diode array detector for the analysis of major lignin‐derived phenolic compounds produced by alkaline cupric oxide oxidation was developed. In an analysis of a collection of 11 representative monomeric lignin phenolic compounds, all compounds were clearly separated within 6 min with excellent peak shapes, with a limit of detection of 0.5–2.5 μM, a limit of quantification of 2.5–5.0 μM, and a dynamic range of 5.0–2.0 mM (R² > 0.997). The new ultra‐high performance supercritical fluid chromatography method was also applied for the qualitative and quantitative analysis of lignin‐derived phenolic compounds obtained upon alkaline cupric oxide oxidation of a commercial humic acid. Ten out of the previous eleven model compounds could be quantified in the oxidized humic acid sample. The high separation power and short analysis time obtained demonstrate for the first time that supercritical fluid chromatography is a fast and reliable technique for the analysis of lignin‐derived phenols in complex environmental samples.     

Aglycone specificity of <Emphasis Type="Italic">Thermotoga neapolitana</Emphasis> β-glucosidase 1A modified by mutagenesis,leading to increased catalytic efficiency in quercetin-3-glucoside hydrolysis

Background  

The thermostable β-glucosidase (TnBgl1A) from Thermotoga neapolitana is a promising biocatalyst for hydrolysis of glucosylated flavonoids and can be coupled to extraction methods using pressurized hot water. Hydrolysis has however been shown to be dependent on the position of the glucosylation on the flavonoid, and e.g. quercetin-3-glucoside (Q3) was hydrolysed slowly. A set of mutants of TnBgl1A were thus created to analyse the influence on the kinetic parameters using the model substrate para-nitrophenyl-β-D-glucopyranoside (pNPGlc), and screened for hydrolysis of Q3.     

Effect of heat treatment on the structure of L-Ta2O5:: a study by XRPD and HRTEM methods

The effect of heat treatment on the structure of L-Ta₂O₅ has been studied by X-ray powder diffraction and high-resolution transmission electron microscopy, complemented by density measurements. Two stable low-temperature forms of L-Ta₂O₅ were found: one below about 1000°C with a b^* multiplicity of m≈13.5 and the other at 1350°C with m=11. The former modification was disordered, containing defects and twins, while the latter seemed to be more ordered. At intermediate temperatures, ordered and disordered mixtures of L-Ta₂O₅ slabs with m values in the range m=11-14 were seen. A new model of a structure of L-Ta₂O₅ (m=11) is proposed. The model can be described as an ordered intergrowth of slabs of α-U₃O₈ and β-U₃O₈ types. The α-U₃O₈ slabs are wider and contain somewhat larger three-sided tunnels that appear to be more suitable for interstitial Ta atoms than the β-U₃O₈ slabs. The density measurements confirm that additional Ta atoms are present in the structure.     

An on-line method for pressurized hot water extraction and enzymatic hydrolysis of quercetin glucosides from onions

A novel environmentally sound continuous-flow hot water extraction and enzymatic hydrolysis method for determination of quercetin in onion raw materials was successfully constructed using a stepwise optimization approach. In the first step, enzymatic hydrolysis of quercetin-3,4′-diglucoside to quercetin was optimized using a three level central composite design considering temperature (75–95 °C), pH (3–6) and volume concentration of ethanol (5–15%). The enzyme used was a thermostable β-glucosidase variant (termed TnBgl1A_N221S/P342L) covalently immobilized on either of two acrylic support-materials (Eupergit^® C 250L or monolithic cryogel). Optimal reaction conditions were irrespective of support 84 °C, 5% ethanol and pH 5.5, and at these conditions, no significant loss of enzyme activity was observed during 72 h of use. In a second step, hot water extractions from chopped yellow onions, run at the optimal temperature for hydrolysis, were optimized in a two level design with respect to pH (2.6 and 5.5), ethanol concentration (0 and 5%) and flow rate (1 and 3 mL min⁻¹) Obtained results showed that the total quercetin extraction yield was 1.7 times higher using a flow rate of 3 mL min⁻¹ (extraction time 90 min), compared to a flow rate of 1 mL min⁻¹ (extraction time 240 min). Presence of 5% ethanol was favorable for the extraction yield, while a further decrease in pH was not, not even for the extraction step alone. Finally, the complete continuous flow method (84 °C, 5% ethanol, pH 5.5, 3 mL min⁻¹) was used to extract quercetin from yellow, red and shallot onions and resulted in higher or similar yield (e.g. 8.4 ± 0.7 μmol g⁻¹ fresh weight yellow onion) compared to a conventional batch extraction method using methanol as extraction solvent.