Molecular dynamics reveal that isoDGR-containing cyclopeptides are true αvβ3 antagonists unable to promote integrin allostery and activation

Ain't got that swing(-out): The cyclopeptide isoDGR is emerging as a new αvβ3 integrin binding motif. Agreement between the results of computational and biochemical studies reveals that isoDGR-containing cyclopeptides are true αvβ3 integrin antagonists that block αvβ3 in its inactive conformation (see scheme). isoDGR-based ligands may give αvβ3 antagonists without paradoxical effects.     

Proton‐conducting electrolytes based on silylated and sulfonated polyetheretherketone: Synthesis and characterization

A derivative of polyetheretherketone (PEEK) having sulfonic acid groups and silicon‐containing substituents covalently bound to the aromatic backbone has been prepared as proton‐exchange membrane material. The polymer 4 (PhSiSPEEK) has been synthesized via (i) sulfonation of PEEK up to 0.9 degree of sulfonation (DS, the number of sulfonic groups per repeat unit), (ii) conversion of sulfonated PEEK 1 (SPEEK09) into sulfonyl chlorinated derivative 2 (PEEKSO₂Cl), (iii) lithiation of 2 and subsequent addition of PhSiCl₃, followed by hydrolysis. The chemical structure of the synthesized polymers has been investigated by ¹H NMR and ¹³C NMR and ATR/FTIR spectroscopy and their thermal stability has been evaluated by thermogravimetric analysis. The presence of inorganic moieties increases the thermal stability of 4 with respect to the sulfonated and not silylated product. Despite its very high DS, PhSiSPEEK is insoluble in water but does not possess the plastic properties needed to be used as an electrolyte membrane. Blend membranes made of SPEEK05 (DS = 0.5) and containing 10 and 25 wt % of 4 (DS = 0.9, degree of silylation DSi = 0.1) have been prepared and characterized by water uptake measurements and electrochemical impedance spectroscopy. The combination of the two functionalized polymers having different properties allows to obtain proton‐conducting electrolytes that are potential candidates for fuel cells applications. © 2010 Wiley Periodicals, Inc. J Polym Sci Part A: Polym Chem 48: 2178–2186, 2010     

The effect of ring nitrogen atoms on the homolytic reactivity of phenolic compounds: understanding the radical-scavenging ability of 5-pyrimidinols

Six substituted 5-pyrimidinols were synthesized, and the thermochemistry and kinetics of their reactions with free radicals were studied and compared to those of equivalently substituted phenols. To assess their potential as hydrogen-atom donors to free radicals, we measured their O-H bond dissociation enthalpies (BDEs) using the radical equilibration electron paramagnetic resonance technique. This revealed that the O-H BDEs in 5-pyrimidinols are, on average, about 2.5 kcal mol(-1) higher than those in equivalently substituted phenols. The results are in good agreement with theoretical predictions, and confirm that substituent effects on the O-H BDE of 5-pyrimidinol are essentially the same as those on the Obond;H BDE in phenol. The kinetics of the reactions of these compounds with peroxyl radicals has been studied by their inhibition of the AIBN-initiated autoxidation of styrene, and with alkyl and alkoxyl radicals by competition kinetics. Despite their larger O-H BDEs, 5-pyrimidinols appear to transfer their phenolic hydrogen-atom to peroxyl radicals as quickly as equivalently substituted phenols, while their reactivity toward alkyl radicals far exceeds that of the corresponding phenols. We suggest that this rate enhancement, which is large in the case of alkyl radical reactions, small in the case of peroxyl radical reactions, and nonexistent in the case of alkoxyl radical reactions, is due to polar effects in the transition states of these atom-transfer reactions. This hypothesis is supported by additional experimental and theoretical results. Despite this higher reactivity of 5-pyrimidinols towards radicals compared to phenols, electrochemical measurements indicate that they are more stable to one-electron oxidation than equivalently substituted phenols. For example, the 5-pyrimidinol analogues of 2,4,6-trimethylphenol and butylated hydroxytoluene (BHT) were found to have oxidation potentials approximately 400 mV higher than their phenolic counterparts, but reacted roughly one order of magnitude faster with alkyl radicals and at about the same rate with peroxyl radicals. The 5-pyrimidinol structure should, therefore, serve as a useful template for the rational design of novel air-stable radical scavengers and chain-breaking antioxidants that are more effective than phenols.     

Metal content in river suspended particulate matter: data on Po River

The present study summarizes the last ten years of literature on heavy metal distribution in Suspended Particulate Matter (SPM) and dissolved phase in the Po River (Italy). The work compares different methodologies employed to collect, concentrate and fractionate the samples. The importance of metal speciation as a function of particle size is underlined and two approaches to metal speciation in the colloidal fraction of Po River SPM are presented: Sedimentation Field-Flow Fractionation (SdFFF) and pH-dependent extractions. Finally, emphasis is placed on the need for comparison with a reference "natural background level" of the metal load in Po River particulate matter in order to determine the real human contribution to river pollution. The high values of some trace transition elements, such as Cr and Ni, have been compared with clay sediments around Ferrara and with bricks in historic buildings. The highly comparable natural concentration of these metals in Po fine sedimentary rocks and in historic brick buildings of Ferrara (XII-XVI centuries) can provide information on natural geochemical anomalies.     

Stereoselective synthesis and functionalization of 4-heterosubstituted β-lactams

Polyfunctionalized β-lactams were prepared with high stereoselectivity in an efficient manner. A palladium-catalyzed [2+2] carbonylative cycloaddition of allyl bromide with heteroaryliden-anilines afforded 2-azetidinones N-phenyl substituted, with an heteroaryl moiety linked at the C-4 carbon, and an alkenyl group at the C-3 carbon. The C-3 and the C-4 positions could be further functionalized inserting alkyl and hydroxyl groups in the azetidinone ring, through the generation of a stable azetidinyl anion then captured by various electrophiles.     

Biodegradable materials — Present situation and future perspectives

Biodegradable polymers constitute a loosely defined family of polymers that are designed to degrade through the action of living organisms. They offer a possible alternative to traditional nonbiodegradable polymers if recycling is impractical or not economical. The main driving force behind this technology is the solid waste problem, particularly with regard to the decreasing availability of landfills, the litter problem and the pollution of marine environment by non-biodegradable plastics. Technologies like composting used for the disposal of food and yard waste are the most suitable for the disposal of biodegradable materials. European Standardisation Committee (CEN), Organic Reclamation and Composting Association (ORCA) and German Institute for Standardisation (DIN) have already defined, at a draft level, the basic requirements for a product to be declared compostable. They are based on: complete biodegradability of the product in a time period compatible with composting, measured through respirometric tests (ASTM D5338-9, ISO/CD14855, etc); disintegration of the material during the fermentation phase; no negative effects on compost quality; checking of laboratory-scale results on pilot/full-scale composting plants. These requirements set forth a common base for a universal marking system to readily identify products to be composted. Thermoplastic starch-based polymers and aliphatic polyesters are the two classes of biodegradable materials with the greatest near-term potential. This paper reviews a great variety of properties, structures and biodegradation behaviour of thermoplastic starch in combination with poly(vinyl alcohol) or some aliphatic polyesters like poly(hydroxybutyrate-co-hydroxyvalerate), poly(lactic acid), poly(ϵ-caprolactone) and poly(butanediyl succinate).     

Influence of secondary preparative parameters and aging effects on PLGA particle size distribution: a sedimentation field flow fractionation investigation

Poly(lactic-co-glycolic acid) particles in the 200–400-nm size range were formulated through nanoprecipitation and solvent evaporation methods. Different concentrations of the polymer and stabilizer (Pluronic® F 68) were tested in order to identify the best conditions for making poly(lactic-co-glycolic acid) particles of suitable size, stable in time, and to be used as carriers for brain-targeting drugs. The particles with the best characteristics for delivery system design were those formulated by nanoprecipitation with an organic/water phase ratio of 2:30, a polymer concentration of 25 mg/mL, and a surfactant concentration of 0.83 mg/mL; their surface charge was reasonably negative (approximately -27 mV) and the average size of the almost monodisperse population was roughly 250 nm. Particle characterization was obtained through ζ-potential measurements, scanning electron microscope observations, and particle size distribution determinations; the latter achieved by both photon-correlation spectroscopy and sedimentation field flow fractionation. Sedimentation field flow fractionation, which is considered more reliable than photon-correlation spectroscopy in describing the possible particle size distribution modifications, was used to investigate the effects of 3 months of storage at 4 °C had on the lyophilized particles.

Sedimentation field flow fractionation of immunoglobulin A coated polystyrene beads. Influence of carrier composition on complex characterization

The amount of immunoglobulin A (IgA) adsorbed on the surface of two different samples of polystyrene (PS) microbeads was evaluated using differential sedimentation field flow fractionation (SdFFF) analyses. For the first time, the SdFFF separations obtained by using, as mobile phase, solutions common to many biochemical procedures and applications have been compared and discussed. Good separation results were achieved in the different carriers, and the SdFFF gave equivalent mass per particle values in all carriers provided that the pH and ionic strength conditions of the eluents were well controlled. The IgA adsorption process onto PS occurred by maintaining unaltered the capacity of the PS-IgA substrate to selectively recognize anti-IgA (aIgA), as proven by elution of the ternary complex PS-IgA-aIgA and from the monitored lack of reaction when the PS-IgA was placed in contact with aIgE.     

Molecules Present in Plant Essential Oils for Prevention and Treatment of Colorectal Cancer (CRC)

Essential oils (EOs) are a complex mixture of hydrophobic and volatile compounds synthesized from aromatic plants, commonly present in the human diet. In recent years, many in vitro studies have suggested possible anticancer properties of single EO compounds, on colorectal cancer (CRC) cells. However, the majority of these studies did not compare the effects of these compounds on normal and cancer colon cells. By using NCM-460, a normal human mucosal epithelial cell line, Caco-2, a human colon epithelial adenocarcinoma cell line, and SW-620, colon cancer cells derived from lymph node metastatic site, we identified cinnamaldehyde, derived from cinnamon EO and eugenol, derived from bud clove EO, as compounds with a specific anticancer action selectively targeting the transformed colonic cells. Both cinnamaldehyde (75 µM) and eugenol (800 µM), after 72 h of treatment, were capable to induce apoptosis, necrosis and a cell cycle slowdown in Caco-2 and in SW-620, but not in NCM-460 cells. If associated with a targeted delivery to the colon, these two compounds could prove effective in the prevention or treatment of CRC.     

Precision in differential field-flow fractionation: a chemometric study

In the present paper, the capabilities of differential field-flow fractionation, i. e., the determination of an incremental quantity of a colloidal species, e. g., an uptake adsorbed mass, determined by the joint use of two independent FFF measurements, over a species and the same modified species respectively, are considered. The different error types, those related to the retention time determinations and those coming from the operating parameter fluctuations were considered. The different components were computed with reference to SdFFF determinations of bare polystyrene (PS) submicronic particles and the same PS particles covered by IgG. Comparison was made between theoretically computed precision and experiments. The error coming from the experimental measurement of retention times was identified to be the main source of errors. Accordingly, it was possible to make explicit the detection limits and the confidence intervals of the adsorbed mass uptake, as a function of experimental quantities such as the retention ratio, the detector calibration ratio, the injected quantity, the baseline noise, and the void time relative error. An experimentally determined and theoretically foreseen dependence of both the experimental detection and confidence limits (approximately +/- 10(-17) g) on the square root of the injected concentration, for constant injected volume, was found.