PHOTOCHEMISTRY and PHOTOBIOLOGY WITHOUT LIGHT

Abstract— This review covers the literature since 1980 on chemically and enzymatically generated electronically excited species. The emphasis lies on triplet states of carbonyl products that are derived from dioxetanes and dioxetanones as precursors or from suitable enzymatic oxygenations. Singlet oxygen, an important excited state species in biological processes, is not explicitly treated. The utilization of triplet excited carbonyl products to promote photochemical and photobiological transformations by energy transfer are of primordial interest and not the photomechanistic behavior, photophysical properties and inherent photochemical reactions of such excited state species. Thus, the coverage concentrates on photodamage of DNA and RNA, the photochemistry of flavins, vitamin D, tryptophan, arachidonic acid, chlorophyll, lipid peroxidation, urocanase activation, excitation of chlorophlasts, and the aerobic oxidation of Schiff bases derived from amino acids and proteins. The potential perspectives of employing authentic dioxetanes and enzymatically generated dioxetane intermediates as effective photon equivalents in photochemotherapy, phototoxicity, photoaffinity labeling and photogenotoxicity are pointed out, in the hope of stimulating more intensive activity in this emerging and novel bioorganic and photobiological field.     

On the supposed equilibrium Ph6Pb2Ph4Pb+Ph2Pb in solution

The reaction between pentadeuteriophenyllithium and hexaphenyldilead combined with new measurements of isotopic exchange between Ph₆Pb₂ (labelled with RaD) and Ph₄Pb, have shown that the dilead compound is undissociated in solution. These results cast doubt upon the previously reported equilibrium: Ph₆Pb₂Ph₄Pb+Ph₂Pb.     

Xenicane Diterpenes Revisited: Thermal (E)→(Z) isomerization and conformational motions. A unifying picture

Kinetic and equilibrium studies show that typical xenicanes such as dictyolactone ( 1 ) and 4-hydroxydictyolactone ( 3 ) undergo slow conformation medium-ring flipping between the predominant trans-( 1a or 3a ; Me(20) trans to H–C(3)) and the minor cis-conformers ( 1b or 3b ; Me(20) cis to H–C(3); see Scheme 1). The formation of the latter is inhibited in heterocyclic-ring-opened congeners such as 18-acetoxy-4-hydroxydictyo-19-al ( 7 ). Molecular-mechanics calculations suggest that typical-xenicane cis-conformers are disfavoured by mainly C(4)–C(5) torsional strain. This is confirmed by the observation of two sizably populated cis-and trans-conformers for the unnatural 4-oxoxenicanes 10–12 . Unusually facile thermal (E)→(Z) isomerization of xenicanes 1,3,10–12 , and 7 is also observed (→ 13–17 and 9 , resp.; Scheme 3), reflecting great strain relief in the transition state. Conflicting results in the literature now fit into this scheme which provides a basis for unravelling recognition phenomena with these biologically active systems.     

(η3‐Allyl‐2κ3C)(chloro‐1κCl)(μ‐N,N′‐diethyldithioxamidato‐1:2κ4S,S′:N,N′)[diphenyl(2‐pyridyl)phosphine‐1κP]palladium(II)platinum(II) chloroform solvate

The title compound, [PdPtCl(C₃H₅)(C₆H₁₀N₂S₂)(C₁₇H₁₄NP)]·CHCl₃, was obtained by deprotonation of the initial platinum(II) complex of the di­thio­xamide and subsequent reaction with [Pd(η³‐C₃H₅)(μ‐Cl)]₂. Both metal atoms exhibit a square‐planar coordination geometry, with the two planes forming a dihedral angle of 21.7 (2)°. The di­thio­xamide bis‐chelating bridge is flat.     

Polycondensed nitrogen heterocycles. Part 17. Isoxazolo[4,3-d]pyrazolo[3,4-f][1,2,3]triazepine. A new ring system

The title compounds were prepared by nitration of compounds 2 , reduction of the dinitro derivatives 4 and diazotization of the diamino derivatives 6 followed by an intramolecular coupling reaction. Compound 4a showed good activity against Salmonella cholerasuis and Clostridium perfringens bacteria.     

Structural investigation of 3,5‐disubstituted isoxazoles by 1H‐nuclear magnetic resonance

HIV‐1 integrase (IN) is a very promising and validated target for the development of therapeutic agents against AIDS. In an effort to design and synthesize biological isosteric analogs of β‐diketoacid‐containing inhibitors of IN, we prepared a series of substituted isoxazole carboxylic acids. Several of these compounds inhibited catalytic activities of purified IN at micromolar concentration range. With an aim to prepare a large number of analogues based on the isoxazole pharmacophore we focused our study on a series of 3,5‐disubstituted isoxazole isomers. For a rapid structural analysis we discovered a convenient ¹H‐nmr method for distinguishing between isomeric structures based on their H‐4 assignments. This “finger print” approach to isomer identification will be useful in combinatorial chemistry settings where a mixture can be further derivatized.     

Quantum mechanical calculations of NMR J coupling values in the determination of relative configuration in organic compounds

[structure: see text] An approach relying on quantum mechanical calculations of proton-proton and proton-carbon J coupling values is proposed as a tool for assigning the relative configuration on chiral organic compounds. The method is suitable for carbon frameworks containing several adjacent stereogenic centers and may allow significant advances in the extensive use of spin-spin couplings in structural elucidation.     

Implementation of the finite field perturbation method in the CRYSTAL program for calculating the dielectric constant of periodic systems

The finite field approach has been implemented in the periodic ab initio CRYSTAL program and been used for calculating the dielectric constants of crystalline LiF and MgO (FCC structure) and BeO (wurtzite structure). To maintain the periodicity along the applied field direction, a "sawtooth" potential is used in conjunction with a supercell scheme. Supercells four to five times longer than the primitive cell in the direction of the applied field provide well-converged results. The influence of the computational parameters is discussed. An alternative scheme has also been implemented, for inner check, that consists of applying a static electric field to a slab of increasing thickness in the direction orthogonal to the surface; the dielectric response at the center of the slab is shown to converge rapidly to the bulk value evaluated with the sawtooth field. The method is accurate and permits the determination of nonlinear corrections to the dielectric constant. When used in conjunction with the local density approximation (LDA) scheme, it provides for the dielectric constant of the three above-mentioned compounds values close to those recently obtained with a time-dependent density functional theory approach.