Protein–Inorganic Array Construction: Design and Synthesis of the Building Blocks

Herein we describe the design and synthesis of the first series of di‐functional ligands for the directed construction of inorganic‐protein frameworks. The synthesized ligands are composed of a metal‐ion binding moiety (terpyridine‐based) conjugated to an epoxysuccinyl peptide, known to covalently bind active cysteine proteases through the active‐site cysteine. We explore and optimize two different conjugation chemistries between the di‐functionalized metal‐ion ligand and the epoxysuccinyl‐containing peptide moiety: peptide‐bond formation (with limited success) and Cu^I‐catalysed click chemistry (with good results). Further, the complexation of the synthesized ligands with Fe^II and Ni^II ions is investigated: the di‐functional ligands are confirmed to behave similarly to the parent terpyridine. As designed, the peptidic moiety does not interfere with the complexation reaction, in spite of the presence of two triazole rings that result from the click reaction. ES‐MS together with NMR and UV/Vis studies establish the structure, the stoichiometry of the complexation reactions, as well as the conditions under which chemically sensitive peptide‐containing polypyridine ligands can undergo the self‐assembly process. These results establish the versatility of our approach and open the way to the synthesis of di‐functional ligands containing more elaborated polypyridine ligands as well as affinity labels for different enzyme families. As such, this paper is the first step towards the construction of robust supramolecular species that cover a size‐regime and organization level previously unexplored.     

Quantum fidelity in the thermodynamic limit

We study quantum fidelity, the overlap between two ground states of a many-body system, focusing on the thermodynamic regime. We show how a drop in fidelity near a critical point encodes universal information about a quantum phase transition. Our general scaling results are illustrated in the quantum Ising chain for which a remarkably simple expression for fidelity is found.     

Traveling wave solutions of a model of skin pattern formation in a singular case

We study traveling wave solutions to a system of four non‐linear partial differential equations, which arise in a tissue interaction model for skin morphogenesis. Under the assumption that the strength of attachment of the epidermis to the basal lamina is sufficiently large, we prove the existence and uniqueness (up to a translation) of traveling wave solutions connecting two stationary states of the system with the dermis and epidermis cell densities being positive. We discuss the problem of the minimal wave speed. Copyright © 2010 John Wiley & Sons, Ltd.     

Thermal stability of piroxicam

The application of thermal method is of great importance regarding the pharmaceutical problems such as the control of raw materials, the determination of purity, the qualitative and quantitative analysis of drug formulation, tests of thermal stability and compatibility and the determination of kinetic parameters etc. The purpose of a kinetic investigation is to calculate the kinetic parameters and the determination of the kinetic model for the studied process. The results are further used to predict the system’s behaviour in various circumstances. A kinetic study regarding the piroxicam—active substance’s thermal decomposition was performed under isothermal conditions and nitrogen atmosphere, for the temperature steps: 200, 205, 210, 215 and 220 °C. The TG/DTG data were processed by three differential methods: isothermal—isoconversional, Friedman’s isothermal isoconversional and isothermal model-fitting. The obtained results are in good accord between them, as well as with those obtained under non-isothermal conditions from a previous work and confirm the necessity of the kinetic parameters determining in different thermal conditions, by the adequate calculation methods.     

Synthesis and Stereochemistry of Novel Dibrominated 1,5-Dioxaspiro[5.5]undecane Derivatives

 The synthesis and stereochemistry of new dibrominated spiro-1,3-dioxane derivatives are reported. Investigations by means of NMR methods and single crystal X-ray diffraction for two compounds revealed the high regio- and diastereoselectivity of the bromination reaction of some new spiro-1,3-dioxanes and the asymmetric induction of the chiral carbon atom located in the spiro skeleton.     

Exploratory studies toward the synthesis of the peroxylactone unit of plakortolides

Our efforts in construction the 1,2-dioxane ring of plakortolides through two approaches are described. The first one involved as a key step an acid catalyzed 6-endo ring closure of β-hydroperoxy trans-epoxides directed by a vinyl group adjacent to the epoxide function. By this route, an advanced intermediate of plakortolides was obtained in six steps and 35% overall yield. The second approach featured a 1,2-dioxane ring forming by a double opening of bis-epoxides by ethereal hydrogen peroxide. This reaction did not proceed in the expected sense and exclusive formation of hydroperoxy tetrahydropyran derivatives was observed via a tandem oxacyclization–hydroperoxidation sequence.     

Qualitative assessment of nanofiller dispersion in poly(ε-caprolactone) nanocomposites by mechanical testing, dynamic rheometry and advanced thermal analysis

A comprehensive overview of available methods for assessing nanofiller dispersion is presented for a wide range of layered silicate-based poly(ε-caprolactone) (PCL) nanocomposites. Focusing on their respective strengths and weaknesses, rheological, mechanical and thermal characterization approaches are evaluated in direct relation to morphological information. Pronounced changes in the rheological and mechanical properties of the materials are only observed for nanocomposites displaying the highest nanofiller dispersion levels, as confirmed by an innovative and highly reliable thermal analysis approach based on quasi-isothermal crystallization. As such, the data obtained from the different methods also allow a detailed investigation of the crucial factors affecting nanofiller dispersion, evidencing the importance of specific matrix/filler interactions and the need for proper melt processing conditions when targeting significant property enhancements. Finally, the wide potential of the developed methodologies for the characterization of polymeric nanocomposites in general is illustrated by an extension to carbon nanotube-based PCL composites, unambiguously demonstrating their complementarity and broad applicability.     

Conformational Study of Glycal-Type Neuraminidase Inhibitors

The conformational flexibility of two glycal-type neuraminidase inhibitors has been studied, using several molecular modeling techniques. In agreement with the experimental data available, an intramolecular hydrogen bond, representing a key structural feature that controls the conformer distribution in solution, has been identified. The contribution of each substituent to the overall equilibrium was evaluated using simplified derivatives. Additionally, four methods for estimating NMR coupling constants from dihedral angles were evaluated and the Haasnoot method was found to be appropriate for this class of sugars. These results should allow a better understanding of the structural parameters governing physico-chemical properties of glycal-like compounds. Supplemental materials are available for this article. Go to the publisher's online edition of Journal of Carbohydrate Chemistry to view the free supplemental file.