Reaction of dimethoxycarbene-DMAD zwitterion with 1,2-diones and anhydrides: a novel synthesis of highly substituted dihydrofurans and spirodihydrofurans

The zwitterion formed by the reaction of dimethoxycarbene and DMAD adds efficiently to one of the carbonyl groups of 1,2-dicarbonyl compounds and anhydrides to generate dihydrofurans and spirodihydrofurans in good yields. In many cases, the carbene inserts into the C-C bond of the dione to yield masked vicinal tricarbonyl systems.     

Ab initio calculations and molecular dynamics simulation of H2 adsorption on CN3Be3+ cluster

Hydrogen adsorption properties of the CN₃Be₃⁺ cluster have been studied using density functional theory and MP2 method with a 6–31++G** basis set. Five hydrogen molecules get adsorbed on the CN₃Be₃⁺ cluster with a hydrogen storage capacity of 10.98 wt%. Adsorption of three H₂ molecules on one of the three Be atoms in a cluster is reported for the first time. It is due to the more positive charge on this Be atom than the remaining two. The average value for H₂ adsorption energy in CN₃Be₃⁺ (5H₂) complexes is 0.41 (0.43) eV/H₂ at MP2 (wB97XD) level, which fits well within the ideal range. Adsorption energy from electronic structure calculations plays an important role in retaining the number of H₂ molecules on a cluster during atom-centered density matrix propagation (ADMP) molecular dynamics (MD) simulations. According to ADMP-MD simulations, out of five H₂ adsorbed molecules on CN₃Be₃⁺, four and two H₂ molecules remain absorbed on CN₃Be₃⁺ cluster at 275 K and 350 K, respectively, during the simulation.

     

Supramolecular Packing Drives Morphological Transitions of Charged Surfactant Micelles

The shape and size of self-assembled structures upon local organization of their molecular building blocks are hard to predict in the presence of long-range interactions. Combining small-angle X-ray/neutron scattering data, theoretical modelling, and computer simulations, sodium dodecyl sulfate (SDS), over a broad range of concentrations and ionic strengths, was investigated. Computer simulations indicate that micellar shape changes are associated with different binding of the counterions. By employing a toy model based on point charges on a surface, and comparing it to experiments and simulations, it is demonstrated that the observed morphological changes are caused by symmetry breaking of the irreducible building blocks, with the formation of transient surfactant dimers mediated by the counterions that promote the stabilization of cylindrical instead of spherical micelles. The present model is of general applicability and can be extended to all systems controlled by the presence of mobile charges.     

Classical gauge theories as dynamical systems—Regularity and chaos

In this review we present the salient features of dynamical chaos in classical gauge theories with spatially homogeneous fields. The chaotic behaviour displayed by both abelian and non-abelian gauge theories and the effect of the Higgs term in both cases are discussed. The role of the Chern-Simons term in these theories is examined in detail. Whereas, in the abelian case, the pure Chern-Simons-Higgs system is integrable, addition of the Maxwell term renders the system chaotic. In contrast, the non-abelian Chern-Simons-Higgs system is chaotic both in the presence and the absence of the Yang-Mills term. We support our conclusions with numerical studies on plots of phase trajectories and Lyapunov exponents. Analytical tests of integrability such as the Painlevé criterion are carried out for these theories. The role of the various terms in the Hamiltonians for the abelian Higgs, Yang-Mills-Higgs and Yang-Mills-Chern-Simons-Higgs systems with spatially homogeneous fields, in determining the nature of order-disorder transitions is highlighted, and the effects are shown to be counter-intuitive in the last-named system.     

Structural examination of ring-closing metathesis-derived 15-member macrocycles as Grb2 SH2 domain-binding tetrapeptide mimetics

Ring-closing metathesis (RCM) was employed to join carboxy-terminal alkenyl glycine side chains together with vinyl- and allyl-functionality appended to the beta-methylene of amino-terminal phosphotyrosyl (pTyr) mimetics. This required the synthesis of a variety of new pTyr mimetics, including a novel aza-containing analogue. Many of the resulting 15-member macrocyclic tetrapeptide mimetics exhibited low nanomolar Grb2 SH2 domain-binding affinities in spite of the fact that differing ring junction stereochemistries and geometries of the RCM-derived double bond were employed. The finding that significant latitude exists in the structural requirements for ring closure may facilitate the development of therapeutically relevant macrocyle-based Grb2 SH2 domain-binding antagonists. The synthetic approaches used in this study may also find application to peptide mimetics directed at other biological targets.     

Linkage Determination of Linear Oligosaccharides by MSn (n > 2) Collision-Induced Dissociation of Z1 Ions in the Negative Ion Mode

Obtaining unambiguous linkage information between sugars in oligosaccharides is an important step in their detailed structural analysis. An approach is described that provides greater confidence in linkage determination for linear oligosaccharides based on multiple-stage tandem mass spectrometry (MSⁿ, n >2) and collision-induced dissociation (CID) of Z₁ ions in the negative ion mode. Under low energy CID conditions, disaccharides ¹⁸O-labeled on the reducing carbonyl group gave rise to Z₁ product ions (m/z 163) derived from the reducing sugar, which could be mass-discriminated from other possible structural isomers having m/z 161. MS³ CID of these m/z 163 ions showed distinct fragmentation fingerprints corresponding to the linkage types and largely unaffected by sugar unit identities or their anomeric configurations. This unique property allowed standard CID spectra of Z₁ ions to be generated from a small set of disaccharide samples that were representative of many other possible isomeric structures. With the use of MSⁿ CID (n = 3 – 5), model linear oligosaccharides were dissociated into overlapping disaccharide structures, which were subsequently fragmented to form their corresponding Z₁ ions. CID data of these Z₁ ions were collected and compared with the standard database of Z₁ ion CID using spectra similarity scores for linkage determination. As the proof-of-principle tests demonstrated, we achieved correct determination of individual linkage types along with their locations within two trisaccharides and a pentasaccharide.

A Practical and Enantiospecific Synthesis of (−)‐(R)‐ and (+)‐(S)‐Piperidin‐3‐ols

A highly enantiospecific, azide‐free synthesis of (?)‐(R)‐ and (+)‐(S)‐piperidin‐3‐ol in excellent yield was developed. The key step of the synthesis involves the enantiospecific ring openings of enantiomerically pure (R)‐ and (S)‐2‐(oxiran‐2‐ylmethyl)‐1H‐isoindole‐1,3(2H)‐diones with the diethyl malonate anion and subsequent decarboxylation.     

Molecular interactions in β-alanine-water-methanol solutions at 308.15 K on volumetric, viscometeric, and acoustic data

The density, viscosity and ultrasonic velocity for β-alanine solutions in aqueous and aqueous methanol medium at different concentrations has been determined at 308.15 K. The experimentally obtained data were used to evaluate the apparent molal volume and apparent molal adiabatic compressibility. The related thermodynamic parameters like partial molal volume as well as partial molal adiabatic compressibility at infinite dilution along with their corresponding constants S _v and S _k , respectively, give an insight to the nature of molecular interactions. The viscosity coefficient has also been calculated using Jones-Dole equation.     

Doping and bond length contributions to Mn K-edge shift in La1 ? xSrxMnO3 (x=0?0.7) and their correlation with electrical transport properties

The room temperature experimental Mn K-edge X-ray absorption spectra of La_{1 − x} Sr _x MnO₃ (x = 0−0.7) are compared with the band structure calculations using spin polarized density functional theory. It is explicitly shown that the observed shift in the energy of Mn K-edge on substitution of divalent Sr on trivalent La sites corresponds to the shift in the center of gravity of the unoccupied Mn 4p-band contributing to the Mn K-absorption edge region. This correspondence is then used to separate the doping and size contributions to the edge shift due to variation in the number of electrons in valence band and Mn-O bond lengths, respectively, when Sr is doped into LaMnO₃. Such separation is helpful to find the localization behaviour of charge carriers and to understand the observed transport properties of these compounds.