Mass spectrometric studies of non-covalent compounds: why supramolecular chemistry in the gas phase?

Supramolecular chemistry has progressed quite a long way in recent decades. The examination of non-covalent bonds became the focus of research once the paradigm that the observed properties of a molecule are due to the molecule itself was revised, and researchers became aware of the often quite significant influence of the environment. Mass spectrometry and gas-phase chemistry are ideally suited to study the intrinsic properties of a molecule or a complex without interfering effects from the environment, such as solvation and the effects of counterions present in solution. A comparison of data from the gas phase, i.e. the intrinsic properties, with results from condensed phase, i.e. the properties influenced by the surroundings of the molecule, can consequently contribute significantly to the understanding of non-covalent bonds. This review provides insight into the often-underestimated power of mass spectrometry for the investigation of supramolecules. Through example studies, several aspects are discussed, including determination of structure in solution and the gas phase, ion mobility studies to reveal the formation of zwitterionic structures, stereochemical issues, analysis of reactivity of supramolecular compounds in the condensed and in the gas phase, and the determination of thermochemical data.     

Revised structure for fumarofine,an indenobenzazepine type alkaloid

Fumarofine is not a spirobenzylisoquinoline. Rather, it is the first know reduced indenobensazepine alkaloid, and possesses the cis B/C fused structure $\text{7}$. Rearrangement of synthetic spirobensylisoquinoline $\text{12}$ using methanesulfonyl chloride furnished indenobensazepine $\text{14}$. Osmium tetroxide oxidation of $\text{14}$ gave cis-glysol $\text{15}$. O-Methylfumarofine ($\text{8}$) was then obtained through pyridinium chlorochromate oxidation of $\text{15}$.     

Theory and experiment in concert: templated synthesis of amide rotaxanes, catenanes, and knots

The synthesis of amide rotaxanes, amide catenanes, and trefoil amide knots is based on template effects mediated by hydrogen bonds. While a large body of experimental data is available, in-depth theoretical studies of these template syntheses are virtually unavailable, although they would provide a more profound insight into the exact details of the hydrogen-bonding patterns involved in the formation of these mechanically interlocked species. In this article we present a density functional study of the conformational properties of tetralactam macrocycles and the threading mechanism that produces the immediate precursor for rotaxane and catenane formation. Predictions of the geometries and relative energies made on the basis of semi-empirical AM1 calculations are compared with these results in order to judge the reliability of the simpler approach. Since these calculations yield good agreement with the structural features, they have been used to extend the calculations in order to understand the mechanism of formation of a trefoil dodecaamide knot that has recently been synthesized. The inherent topological chirality of the knot is reflected in the intermediates generated during its formation; these involve helical loops. These loops parallel the rotaxane and catenane wheels with respect to the arrangement of the functional groups that mediate the template effect and may well serve as wheel analogues through which one of the precursor molecules can be threaded. This threading step finally results in the knotted structure. Good agreement between the results of the calculations presented here and experimental findings is achieved.     

New steroidal alkaloids from Fritillaria imperialis and their cholinesterase inhibiting activities

Two new cevanine steroidal alkaloids, impericine (1) and forticine (2) along with known bases delavine (3), persicanidine A (4), and imperialine (5) were isolated from the bulbs of Fritillaria imperialis. The structures of impericine (1) [(20R,22S,25S)-5alpha-cevanin-23-ene-3beta,6beta,16beta-triol] and forticine (2) [(20S,22S,25S)-5alpha-cevanine-3beta,6beta-diol] were determined with the help of spectroscopic studies. These steroidal bases showed anti-acetylcholinesterase and anti-butyrylcholinesterase inhibitory activity.     

Adsorption of Acid Blue 193 from aqueous solutions onto Na-bentonite and DTMA-bentonite

Dodecyltrimethylammonium bromide-modified bentonite (DTMA-bentonite) was prepared and tested as an adsorbent for an acid dye (Acid Blue 193, AB193) removal from aqueous solution in comparison with Na-bentonite. The effect of various experimental parameters was investigated using a batch adsorption technique. In this manner, the adsorption isotherms, adsorption kinetics, and temperature and pH effects upon Acid Blue 193 adsorption on Na-bentonite and DTMA-bentonite were thoroughly examined. Results show that a pH value of 1.5 is favorable for the adsorption of Acid Blue 193. The isothermal data could be well described by the Freundlich equation. The dynamical data fit well with the pseudo-second-order kinetic model. The adsorption capacity of DTMA-bentonite (740.5 mg g(-1)) was found to be around 11 times higher than that of Na-bentonite (67.1 mg g(-1)) at 20 degrees C. Thermodynamic parameters such as activation energy (E(a)) and change in the free energy (DeltaG(0)), the enthalpy (DeltaH(0)), and the entropy (DeltaS(0)) were also evaluated. The overall adsorption process was exothermic but it is only spontaneous at 20 degrees C. The results indicate that Na-bentonite and DTMA-bentonite could be employed as low-cost alternatives to activated carbon in wastewater treatment for the removal of color which comes from textile dyes.     

Syntheses,electrochemical and spectroelectrochemical characterization of benzothiadiazole and benzoselenadiazole based random copolymers

Three novel donor-acceptor-donor type random copolymers based on benzothiadiazole (BTh) and benzoselenadiazole (BSe) were synthesized via Pd (0) catalyzed Suzuki polycondensation reaction. The two acceptor units were coupled with electron rich moieties which are carbazole (CZ), fluorene (FL) and silafluorene (SiFL). Monomers were characterized using ¹H and ¹³C-NMR spectroscopy. The number and weight average molecular weights of the polymers were calculated using gel permeation chromatography (GPC). All three polymers were electrochemically and spectroelectrochemically characterized. PBThBSeCZ, PBThBSeFL and PBThBSeSiFL showed only p-dopable character and their doping/dedoping potentials were determined as 1.4 V/1.2 V, 1.53 V/1.27 V and 1.8 V/1.3 V, respectively. Corresponding HOMO energy levels were calculated as ?5.85 eV, ?6.05 eV and ?6.15 eV whereas LUMO energy levels were found to be ?3.67 eV, ?3.84 eV and ?3.77 eV, respectively. PBThBSeCZ had lower HOMO level and band gap than PBThBSeFL and PBThBSeSiFL due to its increased electron donating capability of nitrogen atom in carbazole unit.     

Analysis of frequency-dependent series resistance and interface states of In/SiO2/p-Si (MIS) structures

In this work, the investigation of the interface state density and series resistance from capacitance–voltage (C–V) and conductance–voltage (G/ω−V) characteristics in In/SiO₂/p-Si metal–insulator–semiconductor (MIS) structures with thin interfacial insulator layer have been reported. The thickness of SiO₂ film obtained from the measurement of the oxide capacitance corrected for series resistance in the strong accumulation region is 220 Å. The forward and reverse bias C–V and G/ω−V characteristics of MIS structures have been studied at the frequency range 30 kHz–1 MHz at room temperature. The frequency dispersion in capacitance and conductance can be interpreted in terms of the series resistance (R_s) and interface state density (D_it) values. Both the series resistance R_s and density of interface states D_it are strongly frequency-dependent and decrease with increasing frequency. The distribution profile of R_s–V gives a peak at low frequencies in the depletion region and disappears with increasing frequency. Experimental results show that the interfacial polarization contributes to the improvement of the dielectric properties of In/SiO₂/p-Si MIS structures. The interface state density value of In/SiO₂/p-Si MIS diode calculated at strong accumulation region is 1.11×10¹² eV⁻¹ cm⁻² at 1 MHz. It is found that the calculated value of D_it (≈10¹² eV⁻¹ cm⁻²) is not high enough to pin the Fermi level of the Si substrate disrupting the device operation.     

Numerical study on local entropy generation in a burner fueled with various fuels

This study considers numerical simulations of the combustions of hydrogen and various hydrocarbons with air, including 21% oxygen and 79% nitrogen, in a burner and the numerical solution of the local entropy generation rate due to the high temperature and velocity gradients in the combustion chamber. The combustion is simulated for the fuel mass flow rates providing the same heat transfer rate to the combustion chamber in the each fuel case. The effects of (only in the case of H₂ fuel) and equivalence ratio () on the combustion and entropy generation rate are investigated for the different (from 5,000 to 10,000 W) and s (from 0.5 to 1.0). The numerical calculation of combustion is performed individually for all cases with the help of the Fluent CFD code. Furthermore, a computer program has been developed to numerically calculate the volumetric entropy generation rate distributions and the other thermodynamic parameters by using the results of the calculations performed with the FLUENT code. The calculations bring out that the maximum reaction rates decrease with the increase of (or the decrease of ). The large positive and negative temperature gradients occur in the axial direction, nonetheless, the increase of significantly reduces them. The calculations bring out also that with the increase of from 0.5 to 1.0, the volumetric local entropy generation rates decrease about 4% and that the merit numbers increase about 16%.     

Synthesis of a new colorimetric receptor based on calix[4]pyrrole binding oxime for selective recognition of fluoride ions

A colorimetric anion sensor α-meso-heptaethylcalix[4]pyrrole-meso-3-aminophenyl-p-nitrobenzaldoxime was synthesised and characterised by various spectroscopic techniques. Anion-binding studies were carried out using UV–vis, and ¹H NMR titrations, revealing that the receptor exhibits selective recognition towards F^?  over other anions. The selectivity for F^?  among the halides is attributed mainly to the hydrogen bond interaction of the receptor with F^? . Receptor showed colour change from colourless to yellow in the presence of tetrabutylammonium fluoride with 1:2 stoichiometry. Cyclic voltammetry studies, carried out in CH₃CN, provided evidence of an anion-dependent electrochemical response with F^?  ion. This response was particularly dramatic in the case of receptor after the addition of ～1 equiv. of F^?  ion.